RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SLC4A1APQ9BWU0 796 aaKnown RBP26.48■■□□□ 1.83
PTPN7-209ENST00000477554 TRPM2O94759 1503 aa26.48■■□□□ 1.83
PTPN7-209ENST00000477554 CPS1P31327 1500 aa26.47■■□□□ 1.83
PTPN7-209ENST00000477554 IQSEC2Q5JU85 1478 aa26.46■■□□□ 1.83
PTPN7-209ENST00000477554 SETD5Q9C0A6 1442 aa26.45■■□□□ 1.82
PTPN7-209ENST00000477554 LRRC7Q96NW7 1537 aa26.44■■□□□ 1.82
PTPN7-209ENST00000477554 RAB3GAP2Q9H2M9 1393 aa26.42■■□□□ 1.82
PTPN7-209ENST00000477554 ALKQ9UM73 1620 aa26.41■■□□□ 1.82
PTPN7-209ENST00000477554 XIRP1Q702N8 1843 aaKnown RBP26.41■■□□□ 1.82
PTPN7-209ENST00000477554 PLEKHG1Q9ULL1 1385 aa26.4■■□□□ 1.82
PTPN7-209ENST00000477554 MPHOSPH9Q99550 1183 aa26.39■■□□□ 1.82
PTPN7-209ENST00000477554 PPP1R15AO75807 674 aaPredicted RBP26.39■■□□□ 1.81
PTPN7-209ENST00000477554 RBM33Q96EV2 1170 aaKnown RBP26.39■■□□□ 1.81
PTPN7-209ENST00000477554 BCANQ96GW7 911 aa26.39■■□□□ 1.81
PTPN7-209ENST00000477554 UBAP1LF5GYI3 381 aa26.38■■□□□ 1.81
PTPN7-209ENST00000477554 ADAMTS13Q76LX8 1427 aa26.37■■□□□ 1.81
PTPN7-209ENST00000477554 KIF1BO60333 1816 aa26.36■■□□□ 1.81
PTPN7-209ENST00000477554 NEXMIFQ5QGS0 1516 aa26.35■■□□□ 1.81
PTPN7-209ENST00000477554 NRXN3Q9Y4C0 1643 aa26.35■■□□□ 1.81
PTPN7-209ENST00000477554 ZNF326Q5BKZ1 582 aaKnown RBP26.34■■□□□ 1.81
PTPN7-209ENST00000477554 NWD1Q149M9 1564 aa26.31■■□□□ 1.8
PTPN7-209ENST00000477554 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.31■■□□□ 1.8
PTPN7-209ENST00000477554 CHD2O14647 1828 aaKnown RBP26.3■■□□□ 1.8
PTPN7-209ENST00000477554 KCNA6P17658 529 aa26.3■■□□□ 1.8
PTPN7-209ENST00000477554 PIP4K2BP78356 416 aa26.28■■□□□ 1.8
PTPN7-209ENST00000477554 HDGFP51858 240 aaKnown RBP26.27■■□□□ 1.8
PTPN7-209ENST00000477554 PTPRUQ92729 1446 aa26.27■■□□□ 1.8
PTPN7-209ENST00000477554 TMEM94Q12767 1356 aa26.26■■□□□ 1.79
PTPN7-209ENST00000477554 TBX22Q9Y458 520 aa26.25■■□□□ 1.79
PTPN7-209ENST00000477554 SETBP1Q9Y6X0 1596 aa26.24■■□□□ 1.79
PTPN7-209ENST00000477554 PPLO60437 1756 aa26.23■■□□□ 1.79
PTPN7-209ENST00000477554 SCAF1Q9H7N4 1312 aaKnown RBP26.23■■□□□ 1.79
PTPN7-209ENST00000477554 PROSER2Q86WR7 435 aaPredicted RBP26.22■■□□□ 1.79
PTPN7-209ENST00000477554 DIP2AQ14689 1571 aa26.21■■□□□ 1.79
PTPN7-209ENST00000477554 CCDC144AA2RUR9 1427 aa26.21■■□□□ 1.79
PTPN7-209ENST00000477554 METP08581 1390 aa26.21■■□□□ 1.79
PTPN7-209ENST00000477554 SPATA31E1Q6ZUB1 1445 aa26.2■■□□□ 1.79
PTPN7-209ENST00000477554 NKTRP30414 1462 aaKnown RBP26.2■■□□□ 1.78
PTPN7-209ENST00000477554 RGL3Q3MIN7 710 aa26.19■■□□□ 1.78
PTPN7-209ENST00000477554 TOM1O60784 492 aa26.18■■□□□ 1.78
PTPN7-209ENST00000477554 SETD1AO15047 1707 aaKnown RBP26.18■■□□□ 1.78
PTPN7-209ENST00000477554 IFT172Q9UG01 1749 aa26.15■■□□□ 1.78
PTPN7-209ENST00000477554 XRN1Q8IZH2 1706 aaKnown RBP26.14■■□□□ 1.78
PTPN7-209ENST00000477554 HSPA1LP34931 641 aa26.14■■□□□ 1.77
PTPN7-209ENST00000477554 AMOTL2Q9Y2J4 779 aa26.14■■□□□ 1.77
PTPN7-209ENST00000477554 ADGRF5Q8IZF2 1346 aa26.13■■□□□ 1.77
PTPN7-209ENST00000477554 ANKRD30BQ9BXX2 1392 aa26.11■■□□□ 1.77
PTPN7-209ENST00000477554 PIK3R4Q99570 1358 aa26.1■■□□□ 1.77
PTPN7-209ENST00000477554 RPGRIP1LQ68CZ1 1315 aa26.09■■□□□ 1.77
PTPN7-209ENST00000477554 VGFO15240 615 aaPredicted RBP26.07■■□□□ 1.76
PTPN7-209ENST00000477554 HRCP23327 699 aa26.06■■□□□ 1.76
PTPN7-209ENST00000477554 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.04■■□□□ 1.76
PTPN7-209ENST00000477554 ACIN1Q9UKV3 1341 aaKnown RBP26.04■■□□□ 1.76
PTPN7-209ENST00000477554 TRIM26Q12899 539 aaPredicted RBP26.03■■□□□ 1.76
PTPN7-209ENST00000477554 MSH6P52701 1360 aa26.02■■□□□ 1.76
PTPN7-209ENST00000477554 ASXL1Q8IXJ9 1541 aa26.02■■□□□ 1.76
PTPN7-209ENST00000477554 ROBO1Q9Y6N7 1651 aa26.02■■□□□ 1.76
PTPN7-209ENST00000477554 ROBO2Q9HCK4 1378 aa25.99■■□□□ 1.75
PTPN7-209ENST00000477554 C14orf37Q86TY3 774 aa25.98■■□□□ 1.75
PTPN7-209ENST00000477554 PIK3C2GO75747 1445 aa25.98■■□□□ 1.75
PTPN7-209ENST00000477554 NALCNQ8IZF0 1738 aa25.98■■□□□ 1.75
PTPN7-209ENST00000477554 TMEM132EQ6IEE7 984 aa25.96■■□□□ 1.75
PTPN7-209ENST00000477554 SLAIN2Q9P270 581 aa25.95■■□□□ 1.74
PTPN7-209ENST00000477554 FAM135BQ49AJ0 1406 aa25.95■■□□□ 1.74
PTPN7-209ENST00000477554 NCOA3Q9Y6Q9 1424 aa25.95■■□□□ 1.74
PTPN7-209ENST00000477554 NRXN1Q9ULB1 1477 aa25.94■■□□□ 1.74
PTPN7-209ENST00000477554 C19orf44Q9H6X5 657 aa25.92■■□□□ 1.74
PTPN7-209ENST00000477554 MYOM2P54296 1465 aa25.91■■□□□ 1.74
PTPN7-209ENST00000477554 STK26Q9P289 416 aa25.9■■□□□ 1.74
PTPN7-209ENST00000477554 DHX57Q6P158 1386 aaKnown RBP25.9■■□□□ 1.74
PTPN7-209ENST00000477554 PTCH1Q13635 1447 aa25.9■■□□□ 1.74
PTPN7-209ENST00000477554 CFAP70Q5T0N1 1121 aa25.89■■□□□ 1.74
PTPN7-209ENST00000477554 KDM2AQ9Y2K7 1162 aa25.88■■□□□ 1.73
PTPN7-209ENST00000477554 ADGRL3Q9HAR2 1447 aa25.88■■□□□ 1.73
PTPN7-209ENST00000477554 PLEKHH1Q9ULM0 1364 aa25.87■■□□□ 1.73
PTPN7-209ENST00000477554 PRAG1Q86YV5 1406 aa25.87■■□□□ 1.73
PTPN7-209ENST00000477554 DISP3Q9P2K9 1392 aa25.86■■□□□ 1.73
PTPN7-209ENST00000477554 ATF3P18847 181 aa25.86■■□□□ 1.73
PTPN7-209ENST00000477554 MST1RQ04912 1400 aa25.85■■□□□ 1.73
PTPN7-209ENST00000477554 WAPLQ7Z5K2 1190 aa25.85■■□□□ 1.73
PTPN7-209ENST00000477554 DCAF11Q8TEB1 546 aa25.85■■□□□ 1.73
PTPN7-209ENST00000477554 C14orf93Q9H972 538 aaKnown RBP25.85■■□□□ 1.73
PTPN7-209ENST00000477554 CADPS2Q86UW7 1296 aa25.84■■□□□ 1.73
PTPN7-209ENST00000477554 MED1Q15648 1581 aaPredicted RBP25.84■■□□□ 1.73
PTPN7-209ENST00000477554 LRPPRCP42704 1394 aaKnown RBP25.83■■□□□ 1.73
PTPN7-209ENST00000477554 PHLPP1O60346 1717 aa25.82■■□□□ 1.72
PTPN7-209ENST00000477554 YTHDC2Q9H6S0 1430 aaKnown RBP25.82■■□□□ 1.72
PTPN7-209ENST00000477554 KNDC1Q76NI1 1749 aa25.81■■□□□ 1.72
PTPN7-209ENST00000477554 TECPR2O15040 1411 aa25.81■■□□□ 1.72
PTPN7-209ENST00000477554 DCCP43146 1447 aa25.81■■□□□ 1.72
PTPN7-209ENST00000477554 BRINP3Q76B58 766 aa25.8■■□□□ 1.72
PTPN7-209ENST00000477554 DDX17Q92841 729 aaKnown RBP25.8■■□□□ 1.72
PTPN7-209ENST00000477554 SIN3AQ96ST3 1273 aa25.8■■□□□ 1.72
PTPN7-209ENST00000477554 COL16A1Q07092 1604 aaPredicted RBP25.79■■□□□ 1.72
PTPN7-209ENST00000477554 ADGRB1O14514 1584 aa25.79■■□□□ 1.72
PTPN7-209ENST00000477554 ABCC11Q96J66 1382 aa25.78■■□□□ 1.72
PTPN7-209ENST00000477554 ILDR2Q71H61 639 aa25.78■■□□□ 1.72
PTPN7-209ENST00000477554 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
PTPN7-209ENST00000477554 LAMC1P11047 1609 aa25.77■■□□□ 1.72
PTPN7-209ENST00000477554 C1orf167Q5SNV9 1468 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms