RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 CHGAP10645 457 aaKnown RBP13.43□□□□□ -0.26
PGK1-204ENST00000477335 UBR1Q8IWV7 1749 aa13.42□□□□□ -0.26
PGK1-204ENST00000477335 IFT172Q9UG01 1749 aa13.42□□□□□ -0.26
PGK1-204ENST00000477335 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
PGK1-204ENST00000477335 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
PGK1-204ENST00000477335 NEXMIFQ5QGS0 1516 aa13.42□□□□□ -0.26
PGK1-204ENST00000477335 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
PGK1-204ENST00000477335 NBPF8Q3BBV2 869 aa13.41□□□□□ -0.26
PGK1-204ENST00000477335 TIMELESSQ9UNS1 1208 aa13.41□□□□□ -0.26
PGK1-204ENST00000477335 CEP170BQ9Y4F5 1589 aaPredicted RBP13.41□□□□□ -0.26
PGK1-204ENST00000477335 DCAF11Q8TEB1 546 aa13.4□□□□□ -0.26
PGK1-204ENST00000477335 ZNF142P52746 1687 aaPredicted RBP13.4□□□□□ -0.26
PGK1-204ENST00000477335 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
PGK1-204ENST00000477335 PPLO60437 1756 aa13.39□□□□□ -0.27
PGK1-204ENST00000477335 ZFYVE9O95405 1425 aa13.39□□□□□ -0.27
PGK1-204ENST00000477335 UHRF1BP1Q6BDS2 1440 aa13.39□□□□□ -0.27
PGK1-204ENST00000477335 KDM5AP29375 1690 aaKnown RBP13.38□□□□□ -0.27
PGK1-204ENST00000477335 MYOM2P54296 1465 aa13.38□□□□□ -0.27
PGK1-204ENST00000477335 ZNF326Q5BKZ1 582 aaKnown RBP13.38□□□□□ -0.27
PGK1-204ENST00000477335 NUTM2DQ5VT03 806 aaPredicted RBP13.38□□□□□ -0.27
PGK1-204ENST00000477335 PRAG1Q86YV5 1406 aa13.38□□□□□ -0.27
PGK1-204ENST00000477335 ADGRF5Q8IZF2 1346 aa13.38□□□□□ -0.27
PGK1-204ENST00000477335 NRXN1Q9ULB1 1477 aa13.37□□□□□ -0.27
PGK1-204ENST00000477335 RIMS2Q9UQ26 1411 aa13.37□□□□□ -0.27
PGK1-204ENST00000477335 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
PGK1-204ENST00000477335 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
PGK1-204ENST00000477335 STAG3Q9UJ98 1225 aa13.35□□□□□ -0.27
PGK1-204ENST00000477335 RPGRIP1LQ68CZ1 1315 aa13.35□□□□□ -0.27
PGK1-204ENST00000477335 SLIT1O75093 1534 aa13.34□□□□□ -0.27
PGK1-204ENST00000477335 PIK3C2GO75747 1445 aa13.33□□□□□ -0.28
PGK1-204ENST00000477335 LTKP29376 864 aa13.33□□□□□ -0.28
PGK1-204ENST00000477335 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
PGK1-204ENST00000477335 TRPM1Q7Z4N2 1603 aa13.32□□□□□ -0.28
PGK1-204ENST00000477335 RALGAPBQ86X10 1494 aa13.32□□□□□ -0.28
PGK1-204ENST00000477335 LMTK3Q96Q04 1460 aa13.32□□□□□ -0.28
PGK1-204ENST00000477335 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
PGK1-204ENST00000477335 ASXL1Q8IXJ9 1541 aa13.3□□□□□ -0.28
PGK1-204ENST00000477335 NBPF1Q3BBV0 1214 aa13.3□□□□□ -0.28
PGK1-204ENST00000477335 CFAP70Q5T0N1 1121 aa13.29□□□□□ -0.28
PGK1-204ENST00000477335 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
PGK1-204ENST00000477335 STAC3Q96MF2 364 aa13.28□□□□□ -0.28
PGK1-204ENST00000477335 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
PGK1-204ENST00000477335 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
PGK1-204ENST00000477335 IQGAP1P46940 1657 aa13.28□□□□□ -0.28
PGK1-204ENST00000477335 VGFO15240 615 aaPredicted RBP13.27□□□□□ -0.29
PGK1-204ENST00000477335 HSPA2P54652 639 aa13.27□□□□□ -0.29
PGK1-204ENST00000477335 TXNDC2Q86VQ3 553 aa13.27□□□□□ -0.29
PGK1-204ENST00000477335 ADAMTS13Q76LX8 1427 aa13.27□□□□□ -0.29
PGK1-204ENST00000477335 ADGRB1O14514 1584 aa13.27□□□□□ -0.29
PGK1-204ENST00000477335 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.29
PGK1-204ENST00000477335 GPRASP1Q5JY77 1395 aa13.26□□□□□ -0.29
PGK1-204ENST00000477335 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.26□□□□□ -0.29
PGK1-204ENST00000477335 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
PGK1-204ENST00000477335 KIAA1210Q9ULL0 1709 aa13.26□□□□□ -0.29
PGK1-204ENST00000477335 PLEKHG1Q9ULL1 1385 aa13.26□□□□□ -0.29
PGK1-204ENST00000477335 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
PGK1-204ENST00000477335 MED14O60244 1454 aa13.25□□□□□ -0.29
PGK1-204ENST00000477335 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
PGK1-204ENST00000477335 ROCK2O75116 1388 aaKnown RBP13.24□□□□□ -0.29
PGK1-204ENST00000477335 TMEM132EQ6IEE7 984 aa13.23□□□□□ -0.29
PGK1-204ENST00000477335 METP08581 1390 aa13.22□□□□□ -0.29
PGK1-204ENST00000477335 LAMC1P11047 1609 aa13.22□□□□□ -0.29
PGK1-204ENST00000477335 EID1Q9Y6B2 187 aa13.22□□□□□ -0.29
PGK1-204ENST00000477335 POLR1AO95602 1720 aaPredicted RBP13.22□□□□□ -0.29
PGK1-204ENST00000477335 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
PGK1-204ENST00000477335 CARD11Q9BXL7 1154 aa13.21□□□□□ -0.29
PGK1-204ENST00000477335 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.3
PGK1-204ENST00000477335 STRCQ7RTU9 1775 aa13.2□□□□□ -0.3
PGK1-204ENST00000477335 HDGFP51858 240 aaKnown RBP13.2□□□□□ -0.3
PGK1-204ENST00000477335 SLC26A8Q96RN1 970 aa13.2□□□□□ -0.3
PGK1-204ENST00000477335 PTPRUQ92729 1446 aa13.2□□□□□ -0.3
PGK1-204ENST00000477335 USP47Q96K76 1375 aa13.2□□□□□ -0.3
PGK1-204ENST00000477335 HSPA5P11021 654 aaKnown RBP13.19□□□□□ -0.3
PGK1-204ENST00000477335 HIRIP3Q9BW71 556 aaPredicted RBP13.19□□□□□ -0.3
PGK1-204ENST00000477335 DIP2AQ14689 1571 aa13.17□□□□□ -0.3
PGK1-204ENST00000477335 YTHDC2Q9H6S0 1430 aaKnown RBP13.17□□□□□ -0.3
PGK1-204ENST00000477335 BCANQ96GW7 911 aa13.16□□□□□ -0.3
PGK1-204ENST00000477335 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
PGK1-204ENST00000477335 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
PGK1-204ENST00000477335 STK26Q9P289 416 aa13.15□□□□□ -0.3
PGK1-204ENST00000477335 ARHGEF28Q8N1W1 1705 aaKnown RBP13.14□□□□□ -0.31
PGK1-204ENST00000477335 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
PGK1-204ENST00000477335 TRAK1Q9UPV9 953 aa13.14□□□□□ -0.31
PGK1-204ENST00000477335 PLEKHH1Q9ULM0 1364 aa13.13□□□□□ -0.31
PGK1-204ENST00000477335 ST20-MTHFSA0A0A6YYL1 179 aa13.13□□□□□ -0.31
PGK1-204ENST00000477335 KNDC1Q76NI1 1749 aa13.13□□□□□ -0.31
PGK1-204ENST00000477335 XRN1Q8IZH2 1706 aaKnown RBP13.13□□□□□ -0.31
PGK1-204ENST00000477335 TECPR2O15040 1411 aa13.13□□□□□ -0.31
PGK1-204ENST00000477335 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
PGK1-204ENST00000477335 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
PGK1-204ENST00000477335 C11orf95C9JLR9 678 aaPredicted RBP13.12□□□□□ -0.31
PGK1-204ENST00000477335 TESK2Q96S53 571 aa13.12□□□□□ -0.31
PGK1-204ENST00000477335 CPS1P31327 1500 aa13.12□□□□□ -0.31
PGK1-204ENST00000477335 DLC1Q96QB1 1528 aa13.12□□□□□ -0.31
PGK1-204ENST00000477335 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
PGK1-204ENST00000477335 PIK3R4Q99570 1358 aa13.09□□□□□ -0.31
PGK1-204ENST00000477335 CHD2O14647 1828 aaKnown RBP13.09□□□□□ -0.31
PGK1-204ENST00000477335 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
PGK1-204ENST00000477335 WAPLQ7Z5K2 1190 aa13.09□□□□□ -0.31
PGK1-204ENST00000477335 PRAM1Q96QH2 718 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms