RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
LSM2-212ENST00000477182 FOXD1Q16676 465 aa17.76■□□□□ 0.43
LSM2-212ENST00000477182 BCANQ96GW7 911 aa17.76■□□□□ 0.43
LSM2-212ENST00000477182 AHDC1Q5TGY3 1603 aaPredicted RBP17.76■□□□□ 0.43
LSM2-212ENST00000477182 IDI1Q13907 227 aa17.75■□□□□ 0.43
LSM2-212ENST00000477182 CHD2O14647 1828 aaKnown RBP17.74■□□□□ 0.43
LSM2-212ENST00000477182 KANK1Q14678 1352 aa17.73■□□□□ 0.43
LSM2-212ENST00000477182 CADPS2Q86UW7 1296 aa17.72■□□□□ 0.43
LSM2-212ENST00000477182 ERBINQ96RT1 1412 aa17.72■□□□□ 0.43
LSM2-212ENST00000477182 C14orf37Q86TY3 774 aa17.71■□□□□ 0.43
LSM2-212ENST00000477182 AFF2P51816 1311 aa17.71■□□□□ 0.42
LSM2-212ENST00000477182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.42
LSM2-212ENST00000477182 ADGRB3O60242 1522 aa17.7■□□□□ 0.42
LSM2-212ENST00000477182 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
LSM2-212ENST00000477182 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
LSM2-212ENST00000477182 ATF3P18847 181 aa17.69■□□□□ 0.42
LSM2-212ENST00000477182 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
LSM2-212ENST00000477182 KIF15Q9NS87 1388 aa17.68■□□□□ 0.42
LSM2-212ENST00000477182 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
LSM2-212ENST00000477182 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
LSM2-212ENST00000477182 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
LSM2-212ENST00000477182 PLEKHG1Q9ULL1 1385 aa17.67■□□□□ 0.42
LSM2-212ENST00000477182 RGS12O14924 1447 aa17.67■□□□□ 0.42
LSM2-212ENST00000477182 MYOM3Q5VTT5 1437 aa17.67■□□□□ 0.42
LSM2-212ENST00000477182 SLC52A1Q9NWF4 448 aa17.67■□□□□ 0.42
LSM2-212ENST00000477182 NUTM2DQ5VT03 806 aaPredicted RBP17.66■□□□□ 0.42
LSM2-212ENST00000477182 ZRANB1Q9UGI0 708 aa17.66■□□□□ 0.42
LSM2-212ENST00000477182 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.66■□□□□ 0.42
LSM2-212ENST00000477182 LMTK2Q8IWU2 1503 aa17.66■□□□□ 0.42
LSM2-212ENST00000477182 DIP2AQ14689 1571 aa17.66■□□□□ 0.42
LSM2-212ENST00000477182 QTRT2Q9H974 415 aaKnown RBP17.65■□□□□ 0.42
LSM2-212ENST00000477182 NOS1P29475 1434 aa17.64■□□□□ 0.42
LSM2-212ENST00000477182 PPP1R15AO75807 674 aaPredicted RBP17.64■□□□□ 0.41
LSM2-212ENST00000477182 TBX22Q9Y458 520 aa17.64■□□□□ 0.41
LSM2-212ENST00000477182 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
LSM2-212ENST00000477182 BRINP3Q76B58 766 aa17.62■□□□□ 0.41
LSM2-212ENST00000477182 NGLY1Q96IV0 654 aa17.62■□□□□ 0.41
LSM2-212ENST00000477182 RRP7BPQ9NSQ0 103 aa17.62■□□□□ 0.41
LSM2-212ENST00000477182 ZFYVE9O95405 1425 aa17.62■□□□□ 0.41
LSM2-212ENST00000477182 SETD5Q9C0A6 1442 aa17.61■□□□□ 0.41
LSM2-212ENST00000477182 C8orf37Q96NL8 207 aa17.6■□□□□ 0.41
LSM2-212ENST00000477182 RIMS2Q9UQ26 1411 aa17.59■□□□□ 0.41
LSM2-212ENST00000477182 PIK3R4Q99570 1358 aa17.59■□□□□ 0.41
LSM2-212ENST00000477182 LRRC59Q96AG4 307 aaKnown RBP17.59■□□□□ 0.41
LSM2-212ENST00000477182 CROCC2H7BZ55 1655 aa17.58■□□□□ 0.41
LSM2-212ENST00000477182 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.58■□□□□ 0.4
LSM2-212ENST00000477182 PTPN23Q9H3S7 1636 aa17.57■□□□□ 0.4
LSM2-212ENST00000477182 DCCP43146 1447 aa17.56■□□□□ 0.4
LSM2-212ENST00000477182 MYO5BQ9ULV0 1848 aa17.56■□□□□ 0.4
LSM2-212ENST00000477182 ASXL1Q8IXJ9 1541 aa17.56■□□□□ 0.4
LSM2-212ENST00000477182 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
LSM2-212ENST00000477182 ABCC5O15440 1437 aa17.55■□□□□ 0.4
LSM2-212ENST00000477182 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
LSM2-212ENST00000477182 CCDC125Q86Z20 511 aa17.54■□□□□ 0.4
LSM2-212ENST00000477182 GCC2Q8IWJ2 1684 aa17.54■□□□□ 0.4
LSM2-212ENST00000477182 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
LSM2-212ENST00000477182 RRBP1Q9P2E9 1410 aaKnown RBP17.53■□□□□ 0.4
LSM2-212ENST00000477182 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.4
LSM2-212ENST00000477182 ADAMTS13Q76LX8 1427 aa17.52■□□□□ 0.4
LSM2-212ENST00000477182 PNPLA6Q8IY17 1366 aa17.51■□□□□ 0.39
LSM2-212ENST00000477182 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
LSM2-212ENST00000477182 TRPC5Q9UL62 973 aaPredicted RBP17.5■□□□□ 0.39
LSM2-212ENST00000477182 AMOTL2Q9Y2J4 779 aa17.5■□□□□ 0.39
LSM2-212ENST00000477182 TRPM2O94759 1503 aa17.5■□□□□ 0.39
LSM2-212ENST00000477182 FAM50AQ14320 339 aaKnown RBP17.49■□□□□ 0.39
LSM2-212ENST00000477182 DAPK1P53355 1430 aa17.48■□□□□ 0.39
LSM2-212ENST00000477182 MST1RQ04912 1400 aa17.48■□□□□ 0.39
LSM2-212ENST00000477182 USP21Q9UK80 565 aa17.48■□□□□ 0.39
LSM2-212ENST00000477182 ADAMTS2O95450 1211 aa17.47■□□□□ 0.39
LSM2-212ENST00000477182 EP400Q96L91 3159 aa17.47■□□□□ 0.39
LSM2-212ENST00000477182 CHGAP10645 457 aaKnown RBP17.46■□□□□ 0.39
LSM2-212ENST00000477182 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
LSM2-212ENST00000477182 PTPRUQ92729 1446 aa17.43■□□□□ 0.38
LSM2-212ENST00000477182 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
LSM2-212ENST00000477182 CHIC2Q9UKJ5 165 aa17.42■□□□□ 0.38
LSM2-212ENST00000477182 ATRNO75882 1429 aa17.41■□□□□ 0.38
LSM2-212ENST00000477182 TRIM26Q12899 539 aaPredicted RBP17.41■□□□□ 0.38
LSM2-212ENST00000477182 DDX17Q92841 729 aaKnown RBP17.41■□□□□ 0.38
LSM2-212ENST00000477182 XRN1Q8IZH2 1706 aaKnown RBP17.41■□□□□ 0.38
LSM2-212ENST00000477182 ITGAEP38570 1179 aa17.39■□□□□ 0.37
LSM2-212ENST00000477182 UNC13BO14795 1591 aa17.39■□□□□ 0.37
LSM2-212ENST00000477182 LRP5O75197 1615 aa17.38■□□□□ 0.37
LSM2-212ENST00000477182 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
LSM2-212ENST00000477182 LAMC1P11047 1609 aa17.37■□□□□ 0.37
LSM2-212ENST00000477182 BLMP54132 1417 aaPredicted RBP17.36■□□□□ 0.37
LSM2-212ENST00000477182 SOS2Q07890 1332 aaPredicted RBP17.35■□□□□ 0.37
LSM2-212ENST00000477182 ANKRD50Q9ULJ7 1429 aa17.35■□□□□ 0.37
LSM2-212ENST00000477182 ADGRL2O95490 1459 aa17.35■□□□□ 0.37
LSM2-212ENST00000477182 C1orf167Q5SNV9 1468 aa17.33■□□□□ 0.37
LSM2-212ENST00000477182 SF3B2Q13435 895 aaKnown RBP17.32■□□□□ 0.36
LSM2-212ENST00000477182 GJD4Q96KN9 370 aaPredicted RBP17.32■□□□□ 0.36
LSM2-212ENST00000477182 NALCNQ8IZF0 1738 aa17.32■□□□□ 0.36
LSM2-212ENST00000477182 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
LSM2-212ENST00000477182 NRXN3Q9Y4C0 1643 aa17.32■□□□□ 0.36
LSM2-212ENST00000477182 BCL9LQ86UU0 1499 aa17.31■□□□□ 0.36
LSM2-212ENST00000477182 E9PCH4 1651 aa17.3■□□□□ 0.36
LSM2-212ENST00000477182 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
LSM2-212ENST00000477182 IQGAP3Q86VI3 1631 aa17.29■□□□□ 0.36
LSM2-212ENST00000477182 METP08581 1390 aa17.28■□□□□ 0.36
LSM2-212ENST00000477182 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms