RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 KCNMA1Q12791 1236 aa7.91□□□□□ -1.14
NPHP3-207ENST00000476742 NKX2-3Q8TAU0 364 aa7.91□□□□□ -1.14
NPHP3-207ENST00000476742 COL9A1P20849 921 aa7.9□□□□□ -1.14
NPHP3-207ENST00000476742 SPDYE16A6NNV3 312 aaPredicted RBP7.89□□□□□ -1.15
NPHP3-207ENST00000476742 TNFRSF10AO00220 468 aa7.88□□□□□ -1.15
NPHP3-207ENST00000476742 EVI5O60447 810 aa7.88□□□□□ -1.15
NPHP3-207ENST00000476742 NBR1Q14596 966 aa7.88□□□□□ -1.15
NPHP3-207ENST00000476742 GSK3AP49840 483 aa7.87□□□□□ -1.15
NPHP3-207ENST00000476742 PDIA6Q15084 440 aa7.87□□□□□ -1.15
NPHP3-207ENST00000476742 AVPP01185 164 aa7.85□□□□□ -1.15
NPHP3-207ENST00000476742 ZNF697Q5TEC3 545 aa7.85□□□□□ -1.15
NPHP3-207ENST00000476742 AXIN1O15169 862 aa7.84□□□□□ -1.15
NPHP3-207ENST00000476742 GMPRP36959 345 aa7.83□□□□□ -1.16
NPHP3-207ENST00000476742 BCANQ96GW7 911 aa7.82□□□□□ -1.16
NPHP3-207ENST00000476742 CTC1Q2NKJ3 1217 aa7.81□□□□□ -1.16
NPHP3-207ENST00000476742 TULP1O00294 542 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-207ENST00000476742 SMCPP49901 116 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-207ENST00000476742 SMYD5Q6GMV2 418 aa7.8□□□□□ -1.16
NPHP3-207ENST00000476742 TMEM151AQ8N4L1 468 aa7.8□□□□□ -1.16
NPHP3-207ENST00000476742 SLC16A10Q8TF71 515 aa7.8□□□□□ -1.16
NPHP3-207ENST00000476742 RNF223E7ERA6 249 aa7.79□□□□□ -1.16
NPHP3-207ENST00000476742 SEMA3EO15041 775 aa7.79□□□□□ -1.16
NPHP3-207ENST00000476742 SNRPBP14678 240 aaKnown RBP7.79□□□□□ -1.16
NPHP3-207ENST00000476742 LCE3BQ5TA77 95 aa7.79□□□□□ -1.16
NPHP3-207ENST00000476742 GRXCR2A6NFK2 248 aa7.78□□□□□ -1.16
NPHP3-207ENST00000476742 DDX12PQ92771 950 aa7.78□□□□□ -1.16
NPHP3-207ENST00000476742 PHF14O94880 888 aa7.77□□□□□ -1.17
NPHP3-207ENST00000476742 EPAS1Q99814 870 aa7.77□□□□□ -1.17
NPHP3-207ENST00000476742 TESPA1A2RU30 521 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-207ENST00000476742 TRIM6-TRIM34B2RNG4 842 aa7.76□□□□□ -1.17
NPHP3-207ENST00000476742 MLLT3P42568 568 aaPredicted RBP7.75□□□□□ -1.17
NPHP3-207ENST00000476742 TYW1BQ6NUM6 668 aa7.75□□□□□ -1.17
NPHP3-207ENST00000476742 LIAT1Q6ZQX7 453 aa7.75□□□□□ -1.17
NPHP3-207ENST00000476742 FBXW7Q969H0 707 aa7.75□□□□□ -1.17
NPHP3-207ENST00000476742 GDF11O95390 407 aa7.74□□□□□ -1.17
NPHP3-207ENST00000476742 LMOD2Q6P5Q4 547 aa7.74□□□□□ -1.17
NPHP3-207ENST00000476742 TRIM47Q96LD4 638 aa7.74□□□□□ -1.17
NPHP3-207ENST00000476742 PCDHGA10Q9Y5H3 936 aa7.74□□□□□ -1.17
NPHP3-207ENST00000476742 IRF7Q92985 503 aa7.73□□□□□ -1.17
NPHP3-207ENST00000476742 ANKLE1Q8NAG6 615 aa7.72□□□□□ -1.17
NPHP3-207ENST00000476742 OSBPP22059 807 aa7.71□□□□□ -1.18
NPHP3-207ENST00000476742 KRTAP4-8A0A0G2JLE6 195 aa7.7□□□□□ -1.18
NPHP3-207ENST00000476742 MAP3K7O43318 606 aa7.7□□□□□ -1.18
NPHP3-207ENST00000476742 RASSF7Q02833 373 aa7.7□□□□□ -1.18
NPHP3-207ENST00000476742 EN1Q05925 392 aaPredicted RBP7.7□□□□□ -1.18
NPHP3-207ENST00000476742 RBM33Q96EV2 1170 aaKnown RBP7.7□□□□□ -1.18
NPHP3-207ENST00000476742 KRTAP9-9Q9BYP9 154 aa7.7□□□□□ -1.18
NPHP3-207ENST00000476742 KRTAP9-4Q9BYQ2 154 aa7.7□□□□□ -1.18
NPHP3-207ENST00000476742 SENP2Q9HC62 589 aa7.7□□□□□ -1.18
NPHP3-207ENST00000476742 APLP1P51693 650 aa7.69□□□□□ -1.18
NPHP3-207ENST00000476742 SAMD7Q7Z3H4 446 aa7.69□□□□□ -1.18
NPHP3-207ENST00000476742 ATP13A2Q9NQ11 1180 aa7.69□□□□□ -1.18
NPHP3-207ENST00000476742 PKD2L1Q9P0L9 805 aa7.69□□□□□ -1.18
NPHP3-207ENST00000476742 IGHA1P01876 353 aa7.68□□□□□ -1.18
NPHP3-207ENST00000476742 ZPR1O75312 459 aa7.67□□□□□ -1.18
NPHP3-207ENST00000476742 C6orf132Q5T0Z8 1188 aa7.67□□□□□ -1.18
NPHP3-207ENST00000476742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.67□□□□□ -1.18
NPHP3-207ENST00000476742 NPAS3Q8IXF0 933 aa7.67□□□□□ -1.18
NPHP3-207ENST00000476742 NXF1Q9UBU9 619 aaKnown RBP7.67□□□□□ -1.18
NPHP3-207ENST00000476742 BTBD11A6QL63 1104 aa7.66□□□□□ -1.18
NPHP3-207ENST00000476742 COPS2P61201 443 aa7.66□□□□□ -1.18
NPHP3-207ENST00000476742 RBM26Q5T8P6 1007 aaKnown RBP7.66□□□□□ -1.18
NPHP3-207ENST00000476742 NUTM2FA1L443 756 aa7.65□□□□□ -1.18
NPHP3-207ENST00000476742 TOR4AQ9NXH8 423 aa7.65□□□□□ -1.18
NPHP3-207ENST00000476742 CERKQ8TCT0 537 aa7.64□□□□□ -1.19
NPHP3-207ENST00000476742 KRTAP4-12Q9BQ66 201 aa7.64□□□□□ -1.19
NPHP3-207ENST00000476742 PRIM1P49642 420 aaKnown RBP7.63□□□□□ -1.19
NPHP3-207ENST00000476742 TSR1Q2NL82 804 aaKnown RBP7.63□□□□□ -1.19
NPHP3-207ENST00000476742 GPIHBP1Q8IV16 184 aa7.63□□□□□ -1.19
NPHP3-207ENST00000476742 KIFC2Q96AC6 838 aa7.63□□□□□ -1.19
NPHP3-207ENST00000476742 FCHSD2O94868 740 aa7.62□□□□□ -1.19
NPHP3-207ENST00000476742 FOXC1Q12948 553 aa7.61□□□□□ -1.19
NPHP3-207ENST00000476742 GPAT2Q6NUI2 795 aa7.61□□□□□ -1.19
NPHP3-207ENST00000476742 PACS2Q86VP3 889 aa7.61□□□□□ -1.19
NPHP3-207ENST00000476742 CDHR5Q9HBB8 845 aa7.6□□□□□ -1.19
NPHP3-207ENST00000476742 RNF225M0QZC1 329 aaPredicted RBP7.58□□□□□ -1.2
NPHP3-207ENST00000476742 PPEF1O14829 653 aaPredicted RBP7.58□□□□□ -1.2
NPHP3-207ENST00000476742 ADAM23O75077 832 aa7.58□□□□□ -1.2
NPHP3-207ENST00000476742 PTGDRQ13258 359 aa7.58□□□□□ -1.2
NPHP3-207ENST00000476742 HIC1Q14526 733 aa7.58□□□□□ -1.2
NPHP3-207ENST00000476742 ERBB4Q15303 1308 aa7.57□□□□□ -1.2
NPHP3-207ENST00000476742 H3BM21 787 aa7.57□□□□□ -1.2
NPHP3-207ENST00000476742 NPDC1Q9NQX5 325 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-207ENST00000476742 PRSS12P56730 875 aa7.56□□□□□ -1.2
NPHP3-207ENST00000476742 CYP4X1Q8N118 509 aa7.56□□□□□ -1.2
NPHP3-207ENST00000476742 CDCA7LQ96GN5 454 aa7.56□□□□□ -1.2
NPHP3-207ENST00000476742 RBM27Q9P2N5 1060 aaKnown RBP7.56□□□□□ -1.2
NPHP3-207ENST00000476742 DNMT3AQ9Y6K1 912 aaPredicted RBP7.56□□□□□ -1.2
NPHP3-207ENST00000476742 GNPATO15228 680 aa7.55□□□□□ -1.2
NPHP3-207ENST00000476742 NECTIN2Q92692 538 aa7.55□□□□□ -1.2
NPHP3-207ENST00000476742 TSKSQ9UJT2 592 aa7.55□□□□□ -1.2
NPHP3-207ENST00000476742 ZC3H15Q8WU90 426 aaKnown RBP7.54□□□□□ -1.2
NPHP3-207ENST00000476742 GPR37O15354 613 aa7.53□□□□□ -1.2
NPHP3-207ENST00000476742 FOXK2Q01167 660 aa7.53□□□□□ -1.2
NPHP3-207ENST00000476742 PADI6Q6TGC4 694 aa7.52□□□□□ -1.21
NPHP3-207ENST00000476742 ZMYND10O75800 440 aa7.51□□□□□ -1.21
NPHP3-207ENST00000476742 S1PR4O95977 384 aa7.51□□□□□ -1.21
NPHP3-207ENST00000476742 PLA2G2CQ5R387 149 aa7.51□□□□□ -1.21
NPHP3-207ENST00000476742 KRI1Q8N9T8 703 aaKnown RBP7.51□□□□□ -1.21
NPHP3-207ENST00000476742 NBPF26B4DH59 902 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms