RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 ANKRD30BQ9BXX2 1392 aa33.56■■■□□ 2.96
YIF1A-206ENST00000474986 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.55■■■□□ 2.96
YIF1A-206ENST00000474986 MYO5BQ9ULV0 1848 aa33.52■■■□□ 2.96
YIF1A-206ENST00000474986 KIF1BO60333 1816 aa33.51■■■□□ 2.95
YIF1A-206ENST00000474986 ZNF326Q5BKZ1 582 aaKnown RBP33.49■■■□□ 2.95
YIF1A-206ENST00000474986 IQGAP1P46940 1657 aa33.48■■■□□ 2.95
YIF1A-206ENST00000474986 PPP1R15AO75807 674 aaPredicted RBP33.47■■■□□ 2.95
YIF1A-206ENST00000474986 RPGRIP1LQ68CZ1 1315 aa33.46■■■□□ 2.95
YIF1A-206ENST00000474986 PLEKHG1Q9ULL1 1385 aa33.46■■■□□ 2.95
YIF1A-206ENST00000474986 SPATA31E1Q6ZUB1 1445 aa33.45■■■□□ 2.95
YIF1A-206ENST00000474986 PCGF6Q9BYE7 350 aa33.45■■■□□ 2.95
YIF1A-206ENST00000474986 NEXMIFQ5QGS0 1516 aa33.41■■■□□ 2.94
YIF1A-206ENST00000474986 DHX57Q6P158 1386 aaKnown RBP33.39■■■□□ 2.94
YIF1A-206ENST00000474986 VGFO15240 615 aaPredicted RBP33.35■■■□□ 2.93
YIF1A-206ENST00000474986 NUTM2DQ5VT03 806 aaPredicted RBP33.35■■■□□ 2.93
YIF1A-206ENST00000474986 RGL3Q3MIN7 710 aa33.33■■■□□ 2.93
YIF1A-206ENST00000474986 BCANQ96GW7 911 aa33.33■■■□□ 2.93
YIF1A-206ENST00000474986 ZNF335Q9H4Z2 1342 aaPredicted RBP33.32■■■□□ 2.93
YIF1A-206ENST00000474986 FBXO41Q8TF61 875 aa33.31■■■□□ 2.92
YIF1A-206ENST00000474986 SLC26A8Q96RN1 970 aa33.3■■■□□ 2.92
YIF1A-206ENST00000474986 TBX22Q9Y458 520 aa33.3■■■□□ 2.92
YIF1A-206ENST00000474986 ADAMTS13Q76LX8 1427 aa33.28■■■□□ 2.92
YIF1A-206ENST00000474986 LTBP4Q8N2S1 1624 aa33.28■■■□□ 2.92
YIF1A-206ENST00000474986 SETBP1Q9Y6X0 1596 aa33.28■■■□□ 2.92
YIF1A-206ENST00000474986 DIP2AQ14689 1571 aa33.27■■■□□ 2.92
YIF1A-206ENST00000474986 PPLO60437 1756 aa33.26■■■□□ 2.91
YIF1A-206ENST00000474986 PIK3R4Q99570 1358 aa33.22■■■□□ 2.91
YIF1A-206ENST00000474986 CPS1P31327 1500 aa33.22■■■□□ 2.91
YIF1A-206ENST00000474986 STAC3Q96MF2 364 aa33.21■■■□□ 2.91
YIF1A-206ENST00000474986 IFT172Q9UG01 1749 aa33.2■■■□□ 2.91
YIF1A-206ENST00000474986 NRXN3Q9Y4C0 1643 aa33.2■■■□□ 2.9
YIF1A-206ENST00000474986 KCNA6P17658 529 aa33.19■■■□□ 2.9
YIF1A-206ENST00000474986 MYOM2P54296 1465 aa33.18■■■□□ 2.9
YIF1A-206ENST00000474986 CERKQ8TCT0 537 aa33.18■■■□□ 2.9
YIF1A-206ENST00000474986 SENP3Q9H4L4 574 aaPredicted RBP33.18■■■□□ 2.9
YIF1A-206ENST00000474986 ADGRF5Q8IZF2 1346 aa33.18■■■□□ 2.9
YIF1A-206ENST00000474986 IQSEC2Q5JU85 1478 aa33.13■■■□□ 2.89
YIF1A-206ENST00000474986 NRXN1Q9ULB1 1477 aa33.13■■■□□ 2.89
YIF1A-206ENST00000474986 NWD1Q149M9 1564 aa33.13■■■□□ 2.89
YIF1A-206ENST00000474986 PIK3C2GO75747 1445 aa33.12■■■□□ 2.89
YIF1A-206ENST00000474986 SIN3AQ96ST3 1273 aa33.11■■■□□ 2.89
YIF1A-206ENST00000474986 DCAF11Q8TEB1 546 aa33.1■■■□□ 2.89
YIF1A-206ENST00000474986 NKTRP30414 1462 aaKnown RBP33.1■■■□□ 2.89
YIF1A-206ENST00000474986 ALKQ9UM73 1620 aa33.09■■■□□ 2.89
YIF1A-206ENST00000474986 STRCP1A6NGW2 1772 aa33.09■■■□□ 2.89
YIF1A-206ENST00000474986 METP08581 1390 aa33.08■■■□□ 2.89
YIF1A-206ENST00000474986 CHD2O14647 1828 aaKnown RBP33.05■■■□□ 2.88
YIF1A-206ENST00000474986 LRRC7Q96NW7 1537 aa33.05■■■□□ 2.88
YIF1A-206ENST00000474986 NEUROD1Q13562 356 aa33.04■■■□□ 2.88
YIF1A-206ENST00000474986 CLSPNQ9HAW4 1339 aa33.03■■■□□ 2.88
YIF1A-206ENST00000474986 PTPRUQ92729 1446 aa33.03■■■□□ 2.88
YIF1A-206ENST00000474986 SETD1AO15047 1707 aaKnown RBP33.02■■■□□ 2.88
YIF1A-206ENST00000474986 AMOTL2Q9Y2J4 779 aa33.02■■■□□ 2.88
YIF1A-206ENST00000474986 KDM2AQ9Y2K7 1162 aa33.02■■■□□ 2.88
YIF1A-206ENST00000474986 C14orf93Q9H972 538 aaKnown RBP33.01■■■□□ 2.87
YIF1A-206ENST00000474986 PROSER2Q86WR7 435 aaPredicted RBP32.98■■■□□ 2.87
YIF1A-206ENST00000474986 PRAG1Q86YV5 1406 aa32.97■■■□□ 2.87
YIF1A-206ENST00000474986 L3MBTL2Q969R5 705 aa32.97■■■□□ 2.87
YIF1A-206ENST00000474986 XRN1Q8IZH2 1706 aaKnown RBP32.97■■■□□ 2.87
YIF1A-206ENST00000474986 LAMC1P11047 1609 aa32.96■■■□□ 2.87
YIF1A-206ENST00000474986 TMEM94Q12767 1356 aa32.96■■■□□ 2.87
YIF1A-206ENST00000474986 NCOA3Q9Y6Q9 1424 aa32.94■■■□□ 2.86
YIF1A-206ENST00000474986 CFAP70Q5T0N1 1121 aa32.94■■■□□ 2.86
YIF1A-206ENST00000474986 PTCH1Q13635 1447 aa32.91■■■□□ 2.86
YIF1A-206ENST00000474986 ASXL1Q8IXJ9 1541 aa32.9■■■□□ 2.86
YIF1A-206ENST00000474986 LRPPRCP42704 1394 aaKnown RBP32.89■■■□□ 2.86
YIF1A-206ENST00000474986 TONSLQ96HA7 1378 aa32.89■■■□□ 2.86
YIF1A-206ENST00000474986 ABCC11Q96J66 1382 aa32.87■■■□□ 2.85
YIF1A-206ENST00000474986 TMEM132EQ6IEE7 984 aa32.87■■■□□ 2.85
YIF1A-206ENST00000474986 TECPR2O15040 1411 aa32.86■■■□□ 2.85
YIF1A-206ENST00000474986 CCER1Q8TC90 406 aaPredicted RBP32.85■■■□□ 2.85
YIF1A-206ENST00000474986 YTHDC2Q9H6S0 1430 aaKnown RBP32.85■■■□□ 2.85
YIF1A-206ENST00000474986 XIRP1Q702N8 1843 aaKnown RBP32.83■■■□□ 2.85
YIF1A-206ENST00000474986 ADGRB1O14514 1584 aa32.83■■■□□ 2.85
YIF1A-206ENST00000474986 RBM33Q96EV2 1170 aaKnown RBP32.82■■■□□ 2.84
YIF1A-206ENST00000474986 ROBO2Q9HCK4 1378 aa32.82■■■□□ 2.84
YIF1A-206ENST00000474986 MSH6P52701 1360 aa32.81■■■□□ 2.84
YIF1A-206ENST00000474986 TOM1O60784 492 aa32.8■■■□□ 2.84
YIF1A-206ENST00000474986 UBAP1LF5GYI3 381 aa32.79■■■□□ 2.84
YIF1A-206ENST00000474986 SIRT1Q96EB6 747 aa32.79■■■□□ 2.84
YIF1A-206ENST00000474986 KIAA1210Q9ULL0 1709 aa32.79■■■□□ 2.84
YIF1A-206ENST00000474986 STK26Q9P289 416 aa32.78■■■□□ 2.84
YIF1A-206ENST00000474986 TIMELESSQ9UNS1 1208 aa32.78■■■□□ 2.84
YIF1A-206ENST00000474986 C19orf44Q9H6X5 657 aa32.77■■■□□ 2.84
YIF1A-206ENST00000474986 KNDC1Q76NI1 1749 aa32.77■■■□□ 2.84
YIF1A-206ENST00000474986 C14orf37Q86TY3 774 aa32.76■■■□□ 2.83
YIF1A-206ENST00000474986 FAM135BQ49AJ0 1406 aa32.76■■■□□ 2.83
YIF1A-206ENST00000474986 DCCP43146 1447 aa32.73■■■□□ 2.83
YIF1A-206ENST00000474986 ADGRL3Q9HAR2 1447 aa32.73■■■□□ 2.83
YIF1A-206ENST00000474986 DLC1Q96QB1 1528 aa32.72■■■□□ 2.83
YIF1A-206ENST00000474986 CADPS2Q86UW7 1296 aa32.69■■■□□ 2.82
YIF1A-206ENST00000474986 NBPF1Q3BBV0 1214 aa32.68■■■□□ 2.82
YIF1A-206ENST00000474986 NBPF8Q3BBV2 869 aa32.66■■■□□ 2.82
YIF1A-206ENST00000474986 WAPLQ7Z5K2 1190 aa32.66■■■□□ 2.82
YIF1A-206ENST00000474986 ATF3P18847 181 aa32.65■■■□□ 2.82
YIF1A-206ENST00000474986 TRAK1Q9UPV9 953 aa32.65■■■□□ 2.82
YIF1A-206ENST00000474986 TRPM1Q7Z4N2 1603 aa32.64■■■□□ 2.82
YIF1A-206ENST00000474986 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.64■■■□□ 2.82
YIF1A-206ENST00000474986 PLEKHH1Q9ULM0 1364 aa32.63■■■□□ 2.81
YIF1A-206ENST00000474986 PRAM1Q96QH2 718 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms