RNA–Protein interactions for RNA: ENST00000474889.5

PTPRG-203, Transcript of protein tyrosine phosphatase, receptor type G, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPRG, Length 9,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Dendrite, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRG-203ENST00000474889 C1orf141Q5JVX7 400 aa13.35□□□□□ -0.27
PTPRG-203ENST00000474889 NECTIN2Q92692 538 aa13.35□□□□□ -0.27
PTPRG-203ENST00000474889 GSE1Q14687 1217 aa13.35□□□□□ -0.27
PTPRG-203ENST00000474889 GORABQ5T7V8 394 aa13.35□□□□□ -0.27
PTPRG-203ENST00000474889 BECN2A8MW95 431 aa13.34□□□□□ -0.27
PTPRG-203ENST00000474889 CENPQQ7L2Z9 268 aaPredicted RBP13.34□□□□□ -0.27
PTPRG-203ENST00000474889 PRG4Q92954 1404 aaPredicted RBP13.34□□□□□ -0.27
PTPRG-203ENST00000474889 DHX8Q14562 1220 aaKnown RBP13.34□□□□□ -0.27
PTPRG-203ENST00000474889 TRIM6-TRIM34B2RNG4 842 aa13.33□□□□□ -0.28
PTPRG-203ENST00000474889 MYO6Q9UM54 1294 aa13.33□□□□□ -0.28
PTPRG-203ENST00000474889 H3BQV1 296 aa13.33□□□□□ -0.28
PTPRG-203ENST00000474889 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
PTPRG-203ENST00000474889 CCDC47Q96A33 483 aaKnown RBP13.33□□□□□ -0.28
PTPRG-203ENST00000474889 RUFY1Q96T51 708 aa13.33□□□□□ -0.28
PTPRG-203ENST00000474889 TSPOAP1O95153 1857 aa13.33□□□□□ -0.28
PTPRG-203ENST00000474889 KRI1Q8N9T8 703 aaKnown RBP13.33□□□□□ -0.28
PTPRG-203ENST00000474889 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
PTPRG-203ENST00000474889 CCDC66A2RUB6 948 aa13.32□□□□□ -0.28
PTPRG-203ENST00000474889 RAPGEF3O95398 923 aa13.32□□□□□ -0.28
PTPRG-203ENST00000474889 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
PTPRG-203ENST00000474889 RDXP35241 583 aaKnown RBP13.31□□□□□ -0.28
PTPRG-203ENST00000474889 CCDC18Q5T9S5 1454 aa13.31□□□□□ -0.28
PTPRG-203ENST00000474889 CCDC191Q8NCU4 936 aa13.31□□□□□ -0.28
PTPRG-203ENST00000474889 AAMPQ13685 434 aa13.31□□□□□ -0.28
PTPRG-203ENST00000474889 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
PTPRG-203ENST00000474889 ANKRD30AQ9BXX3 1397 aa13.3□□□□□ -0.28
PTPRG-203ENST00000474889 HSP90B2PQ58FF3 399 aa13.3□□□□□ -0.28
PTPRG-203ENST00000474889 ERCC4Q92889 916 aaPredicted RBP13.3□□□□□ -0.28
PTPRG-203ENST00000474889 TRIM34Q9BYJ4 488 aa13.3□□□□□ -0.28
PTPRG-203ENST00000474889 DIAPH3Q9NSV4 1193 aa13.3□□□□□ -0.28
PTPRG-203ENST00000474889 ROCK1Q13464 1354 aa13.3□□□□□ -0.28
PTPRG-203ENST00000474889 MFAP1P55081 439 aaKnown RBP13.3□□□□□ -0.28
PTPRG-203ENST00000474889 TXNDC2Q86VQ3 553 aa13.3□□□□□ -0.28
PTPRG-203ENST00000474889 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
PTPRG-203ENST00000474889 REC8O95072 547 aa13.29□□□□□ -0.28
PTPRG-203ENST00000474889 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
PTPRG-203ENST00000474889 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
PTPRG-203ENST00000474889 CENPJQ9HC77 1338 aaPredicted RBP13.29□□□□□ -0.28
PTPRG-203ENST00000474889 AKAP17AQ02040 695 aaKnown RBP13.28□□□□□ -0.28
PTPRG-203ENST00000474889 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
PTPRG-203ENST00000474889 PKNOX2Q96KN3 472 aa13.28□□□□□ -0.28
PTPRG-203ENST00000474889 GRM1Q13255 1194 aa13.28□□□□□ -0.28
PTPRG-203ENST00000474889 SMC4Q9NTJ3 1288 aa13.28□□□□□ -0.28
PTPRG-203ENST00000474889 FAM184AQ8NB25 1140 aa13.28□□□□□ -0.28
PTPRG-203ENST00000474889 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
PTPRG-203ENST00000474889 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTPRG-203ENST00000474889 RUFY2Q8WXA3 655 aa13.28□□□□□ -0.28
PTPRG-203ENST00000474889 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
PTPRG-203ENST00000474889 DDX49Q9Y6V7 483 aaKnown RBP13.28□□□□□ -0.28
PTPRG-203ENST00000474889 ARID3AQ99856 593 aa13.27□□□□□ -0.28
PTPRG-203ENST00000474889 CCP110O43303 1012 aa13.27□□□□□ -0.28
PTPRG-203ENST00000474889 NLRP2Q9NX02 1062 aa13.27□□□□□ -0.29
PTPRG-203ENST00000474889 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.29
PTPRG-203ENST00000474889 TERF2IPQ9NYB0 399 aa13.27□□□□□ -0.29
PTPRG-203ENST00000474889 KIF15Q9NS87 1388 aa13.27□□□□□ -0.29
PTPRG-203ENST00000474889 WWC1Q8IX03 1113 aa13.27□□□□□ -0.29
PTPRG-203ENST00000474889 NAT10Q9H0A0 1025 aaKnown RBP13.26□□□□□ -0.29
PTPRG-203ENST00000474889 TTC5Q8N0Z6 440 aa13.26□□□□□ -0.29
PTPRG-203ENST00000474889 KANK4Q5T7N3 995 aaPredicted RBP13.26□□□□□ -0.29
PTPRG-203ENST00000474889 NLRP13Q86W25 1043 aa13.26□□□□□ -0.29
PTPRG-203ENST00000474889 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
PTPRG-203ENST00000474889 MARCH6O60337 910 aa13.25□□□□□ -0.29
PTPRG-203ENST00000474889 CCDC173Q0VFZ6 552 aa13.25□□□□□ -0.29
PTPRG-203ENST00000474889 CCAR2Q8N163 923 aaKnown RBP13.25□□□□□ -0.29
PTPRG-203ENST00000474889 CTDP1Q9Y5B0 961 aaPredicted RBP13.25□□□□□ -0.29
PTPRG-203ENST00000474889 SYNE3Q6ZMZ3 975 aa13.25□□□□□ -0.29
PTPRG-203ENST00000474889 FMN1Q68DA7 1419 aa13.25□□□□□ -0.29
PTPRG-203ENST00000474889 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
PTPRG-203ENST00000474889 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
PTPRG-203ENST00000474889 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
PTPRG-203ENST00000474889 PES1O00541 588 aaKnown RBP13.24□□□□□ -0.29
PTPRG-203ENST00000474889 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
PTPRG-203ENST00000474889 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
PTPRG-203ENST00000474889 CEBPAP49715 358 aaPredicted RBP13.23□□□□□ -0.29
PTPRG-203ENST00000474889 DDX54Q8TDD1 881 aaKnown RBP13.23□□□□□ -0.29
PTPRG-203ENST00000474889 NUCB2P80303 420 aa13.23□□□□□ -0.29
PTPRG-203ENST00000474889 TRIM29Q14134 588 aa13.23□□□□□ -0.29
PTPRG-203ENST00000474889 ZRSR2Q15696 482 aaKnown RBP13.23□□□□□ -0.29
PTPRG-203ENST00000474889 AMOTL1Q8IY63 956 aa13.23□□□□□ -0.29
PTPRG-203ENST00000474889 CGNL1Q0VF96 1302 aa13.23□□□□□ -0.29
PTPRG-203ENST00000474889 CAGE1Q8TC20 777 aa13.23□□□□□ -0.29
PTPRG-203ENST00000474889 CREBRFQ8IUR6 639 aa13.22□□□□□ -0.29
PTPRG-203ENST00000474889 FAM43AQ8N2R8 423 aa13.22□□□□□ -0.29
PTPRG-203ENST00000474889 HOMER1Q86YM7 354 aa13.22□□□□□ -0.29
PTPRG-203ENST00000474889 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPRG-203ENST00000474889 COG3Q96JB2 828 aa13.22□□□□□ -0.29
PTPRG-203ENST00000474889 TSHZ2Q9NRE2 1034 aa13.22□□□□□ -0.29
PTPRG-203ENST00000474889 TAF3Q5VWG9 929 aa13.22□□□□□ -0.29
PTPRG-203ENST00000474889 RNF20Q5VTR2 975 aa13.21□□□□□ -0.29
PTPRG-203ENST00000474889 TOMM22Q9NS69 142 aa13.21□□□□□ -0.29
PTPRG-203ENST00000474889 ZKSCAN1P17029 563 aaPredicted RBP13.21□□□□□ -0.29
PTPRG-203ENST00000474889 PDE4CQ08493 712 aa13.21□□□□□ -0.29
PTPRG-203ENST00000474889 VPS37DQ86XT2 251 aa13.21□□□□□ -0.29
PTPRG-203ENST00000474889 HMGN5P82970 282 aaKnown RBP13.21□□□□□ -0.29
PTPRG-203ENST00000474889 ABTB2Q8N961 1025 aa13.2□□□□□ -0.3
PTPRG-203ENST00000474889 KIF7Q2M1P5 1343 aa13.2□□□□□ -0.3
PTPRG-203ENST00000474889 NGLY1Q96IV0 654 aa13.2□□□□□ -0.3
PTPRG-203ENST00000474889 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
PTPRG-203ENST00000474889 TCEAL9Q9UHQ7 104 aa13.2□□□□□ -0.3
PTPRG-203ENST00000474889 SLC26A8Q96RN1 970 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms