RNA–Protein interactions for RNA: ENST00000474814.1

SNHG12-206, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 2

Gene SNHG12, Length 1,903 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-206ENST00000474814 ERVK-7P63135 1459 aa24.74■■□□□ 1.55
SNHG12-206ENST00000474814 ANP32CO43423 234 aa24.74■■□□□ 1.55
SNHG12-206ENST00000474814 KIF7Q2M1P5 1343 aa24.72■■□□□ 1.55
SNHG12-206ENST00000474814 FBXO31Q5XUX0 539 aaPredicted RBP24.72■■□□□ 1.55
SNHG12-206ENST00000474814 SLC52A1Q9NWF4 448 aa24.72■■□□□ 1.55
SNHG12-206ENST00000474814 ST20-MTHFSA0A0A6YYL1 179 aa24.71■■□□□ 1.55
SNHG12-206ENST00000474814 PPLO60437 1756 aa24.71■■□□□ 1.55
SNHG12-206ENST00000474814 NRXN1Q9ULB1 1477 aa24.71■■□□□ 1.55
SNHG12-206ENST00000474814 IDI1Q13907 227 aa24.71■■□□□ 1.55
SNHG12-206ENST00000474814 ADGRF5Q8IZF2 1346 aa24.7■■□□□ 1.55
SNHG12-206ENST00000474814 KIAA1210Q9ULL0 1709 aa24.7■■□□□ 1.55
SNHG12-206ENST00000474814 ARID4BQ4LE39 1312 aaPredicted RBP24.7■■□□□ 1.54
SNHG12-206ENST00000474814 RPGRIP1LQ68CZ1 1315 aa24.67■■□□□ 1.54
SNHG12-206ENST00000474814 SPATA31D1Q6ZQQ2 1576 aa24.67■■□□□ 1.54
SNHG12-206ENST00000474814 TMEM131LA2VDJ0 1609 aa24.65■■□□□ 1.54
SNHG12-206ENST00000474814 IQGAP1P46940 1657 aa24.64■■□□□ 1.54
SNHG12-206ENST00000474814 ESF1Q9H501 851 aaKnown RBP24.64■■□□□ 1.53
SNHG12-206ENST00000474814 NEXMIFQ5QGS0 1516 aa24.64■■□□□ 1.53
SNHG12-206ENST00000474814 ZMYM3Q14202 1370 aa24.63■■□□□ 1.53
SNHG12-206ENST00000474814 MYO5BQ9ULV0 1848 aa24.62■■□□□ 1.53
SNHG12-206ENST00000474814 CFAP70Q5T0N1 1121 aa24.61■■□□□ 1.53
SNHG12-206ENST00000474814 PIK3C2GO75747 1445 aa24.61■■□□□ 1.53
SNHG12-206ENST00000474814 SCAF11Q99590 1463 aaKnown RBP24.6■■□□□ 1.53
SNHG12-206ENST00000474814 TESK2Q96S53 571 aa24.57■■□□□ 1.52
SNHG12-206ENST00000474814 POLR3GLQ9BT43 218 aa24.55■■□□□ 1.52
SNHG12-206ENST00000474814 VGFO15240 615 aaPredicted RBP24.55■■□□□ 1.52
SNHG12-206ENST00000474814 SETBP1Q9Y6X0 1596 aa24.55■■□□□ 1.52
SNHG12-206ENST00000474814 ZFYVE9O95405 1425 aa24.54■■□□□ 1.52
SNHG12-206ENST00000474814 NUTM2DQ5VT03 806 aaPredicted RBP24.53■■□□□ 1.52
SNHG12-206ENST00000474814 C14orf93Q9H972 538 aaKnown RBP24.53■■□□□ 1.52
SNHG12-206ENST00000474814 A2ML1A8K2U0 1454 aa24.51■■□□□ 1.51
SNHG12-206ENST00000474814 DISP3Q9P2K9 1392 aa24.51■■□□□ 1.51
SNHG12-206ENST00000474814 EIF3AQ14152 1382 aaKnown RBP24.5■■□□□ 1.51
SNHG12-206ENST00000474814 ADGRB1O14514 1584 aa24.5■■□□□ 1.51
SNHG12-206ENST00000474814 STAG3Q9UJ98 1225 aa24.49■■□□□ 1.51
SNHG12-206ENST00000474814 TNRQ92752 1358 aa24.49■■□□□ 1.51
SNHG12-206ENST00000474814 FER1L4A9Z1Z3 1794 aa24.47■■□□□ 1.51
SNHG12-206ENST00000474814 TMF1P82094 1093 aa24.46■■□□□ 1.51
SNHG12-206ENST00000474814 C3P01024 1663 aa24.43■■□□□ 1.5
SNHG12-206ENST00000474814 MYO3AQ8NEV4 1616 aa24.43■■□□□ 1.5
SNHG12-206ENST00000474814 FKBP8Q14318 412 aa24.42■■□□□ 1.5
SNHG12-206ENST00000474814 TMEM132EQ6IEE7 984 aa24.42■■□□□ 1.5
SNHG12-206ENST00000474814 RIMS2Q9UQ26 1411 aa24.41■■□□□ 1.5
SNHG12-206ENST00000474814 CEBPAP49715 358 aaPredicted RBP24.41■■□□□ 1.5
SNHG12-206ENST00000474814 KDM5AP29375 1690 aaKnown RBP24.39■■□□□ 1.5
SNHG12-206ENST00000474814 ASXL1Q8IXJ9 1541 aa24.38■■□□□ 1.49
SNHG12-206ENST00000474814 PRKRIP1Q9H875 184 aaPredicted RBP24.38■■□□□ 1.49
SNHG12-206ENST00000474814 TRAK1Q9UPV9 953 aa24.37■■□□□ 1.49
SNHG12-206ENST00000474814 UBR1Q8IWV7 1749 aa24.37■■□□□ 1.49
SNHG12-206ENST00000474814 SENP3Q9H4L4 574 aaPredicted RBP24.36■■□□□ 1.49
SNHG12-206ENST00000474814 NLRP1Q9C000 1473 aa24.36■■□□□ 1.49
SNHG12-206ENST00000474814 NEFLP07196 543 aa24.35■■□□□ 1.49
SNHG12-206ENST00000474814 TSHZ2Q9NRE2 1034 aa24.35■■□□□ 1.49
SNHG12-206ENST00000474814 ALKQ9UM73 1620 aa24.35■■□□□ 1.49
SNHG12-206ENST00000474814 CENPJQ9HC77 1338 aaPredicted RBP24.35■■□□□ 1.49
SNHG12-206ENST00000474814 SBNO2Q9Y2G9 1366 aa24.35■■□□□ 1.49
SNHG12-206ENST00000474814 ARHGEF28Q8N1W1 1705 aaKnown RBP24.33■■□□□ 1.48
SNHG12-206ENST00000474814 CDCA8Q53HL2 280 aa24.32■■□□□ 1.48
SNHG12-206ENST00000474814 QRICH2Q9H0J4 1663 aa24.32■■□□□ 1.48
SNHG12-206ENST00000474814 SLC24A1O60721 1099 aa24.31■■□□□ 1.48
SNHG12-206ENST00000474814 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.31■■□□□ 1.482e-10■■■■□ 20.6
SNHG12-206ENST00000474814 BCANQ96GW7 911 aa24.31■■□□□ 1.48
SNHG12-206ENST00000474814 MYT1Q01538 1121 aa24.29■■□□□ 1.48
SNHG12-206ENST00000474814 TMEM2Q9UHN6 1383 aa24.29■■□□□ 1.48
SNHG12-206ENST00000474814 PLPPR3Q6T4P5 718 aa24.29■■□□□ 1.48
SNHG12-206ENST00000474814 RIMS1Q86UR5 1692 aaKnown RBP24.28■■□□□ 1.48
SNHG12-206ENST00000474814 SETD1AO15047 1707 aaKnown RBP24.28■■□□□ 1.48
SNHG12-206ENST00000474814 PTPRMP28827 1452 aa24.28■■□□□ 1.48
SNHG12-206ENST00000474814 HNRNPUQ00839 825 aaKnown RBP eCLIP24.27■■□□□ 1.48
SNHG12-206ENST00000474814 NRXN3Q9Y4C0 1643 aa24.27■■□□□ 1.48
SNHG12-206ENST00000474814 YTHDC2Q9H6S0 1430 aaKnown RBP24.27■■□□□ 1.48
SNHG12-206ENST00000474814 ADAMTSL3P82987 1691 aa24.27■■□□□ 1.48
SNHG12-206ENST00000474814 MYOM1P52179 1685 aa24.26■■□□□ 1.47
SNHG12-206ENST00000474814 PER1O15534 1290 aaPredicted RBP24.25■■□□□ 1.47
SNHG12-206ENST00000474814 PANK3Q9H999 370 aa24.25■■□□□ 1.47
SNHG12-206ENST00000474814 HDGFP51858 240 aaKnown RBP24.25■■□□□ 1.47
SNHG12-206ENST00000474814 STK26Q9P289 416 aa24.25■■□□□ 1.47
SNHG12-206ENST00000474814 CNGB1Q14028 1251 aaPredicted RBP24.23■■□□□ 1.47
SNHG12-206ENST00000474814 CCDC184Q52MB2 194 aa24.22■■□□□ 1.47
SNHG12-206ENST00000474814 SLIT1O75093 1534 aa24.18■■□□□ 1.46
SNHG12-206ENST00000474814 ARHGAP23Q9P227 1491 aa24.18■■□□□ 1.46
SNHG12-206ENST00000474814 KTN1Q86UP2 1357 aaKnown RBP24.17■■□□□ 1.46
SNHG12-206ENST00000474814 TULP4Q9NRJ4 1543 aa24.17■■□□□ 1.46
SNHG12-206ENST00000474814 LTKP29376 864 aa24.17■■□□□ 1.46
SNHG12-206ENST00000474814 LRPPRCP42704 1394 aaKnown RBP24.17■■□□□ 1.46
SNHG12-206ENST00000474814 DLC1Q96QB1 1528 aa24.16■■□□□ 1.46
SNHG12-206ENST00000474814 PRAM1Q96QH2 718 aa24.16■■□□□ 1.46
SNHG12-206ENST00000474814 METP08581 1390 aa24.16■■□□□ 1.46
SNHG12-206ENST00000474814 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
SNHG12-206ENST00000474814 SAFB2Q14151 953 aaKnown RBP eCLIP24.15■■□□□ 1.46
SNHG12-206ENST00000474814 RALBP1Q15311 655 aa24.15■■□□□ 1.46
SNHG12-206ENST00000474814 MRS2Q9HD23 443 aa24.15■■□□□ 1.46
SNHG12-206ENST00000474814 PARD3Q8TEW0 1356 aa24.14■■□□□ 1.45
SNHG12-206ENST00000474814 CEP170BQ9Y4F5 1589 aaPredicted RBP24.13■■□□□ 1.45
SNHG12-206ENST00000474814 EVC2Q86UK5 1308 aa24.13■■□□□ 1.45
SNHG12-206ENST00000474814 TXNDC2Q86VQ3 553 aa24.13■■□□□ 1.45
SNHG12-206ENST00000474814 ADAMTS13Q76LX8 1427 aa24.13■■□□□ 1.45
SNHG12-206ENST00000474814 ABCC11Q96J66 1382 aa24.12■■□□□ 1.45
SNHG12-206ENST00000474814 THEMISQ8N1K5 641 aaPredicted RBP24.12■■□□□ 1.45
SNHG12-206ENST00000474814 POGKQ9P215 609 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms