RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 UHRF1BP1LA0JNW5 1464 aa14.54□□□□□ -0.08
C9orf3-214ENST00000473778 SPAG9O60271 1321 aaKnown RBP14.54□□□□□ -0.08
C9orf3-214ENST00000473778 PLEKHH1Q9ULM0 1364 aa14.54□□□□□ -0.08
C9orf3-214ENST00000473778 PTPRTO14522 1441 aa14.53□□□□□ -0.08
C9orf3-214ENST00000473778 C20orf194Q5TEA3 1177 aa14.53□□□□□ -0.08
C9orf3-214ENST00000473778 IPO9Q96P70 1041 aaKnown RBP14.53□□□□□ -0.08
C9orf3-214ENST00000473778 PPP2R1AP30153 589 aa14.53□□□□□ -0.08
C9orf3-214ENST00000473778 NBR1Q14596 966 aa14.52□□□□□ -0.09
C9orf3-214ENST00000473778 UGGT1Q9NYU2 1555 aa14.52□□□□□ -0.09
C9orf3-214ENST00000473778 SYNMO15061 1565 aa14.51□□□□□ -0.09
C9orf3-214ENST00000473778 CRBNQ96SW2 442 aa14.51□□□□□ -0.09
C9orf3-214ENST00000473778 SCAF11Q99590 1463 aaKnown RBP14.51□□□□□ -0.09
C9orf3-214ENST00000473778 ANP32AP39687 249 aaKnown RBP14.51□□□□□ -0.09
C9orf3-214ENST00000473778 TET3O43151 1660 aa14.5□□□□□ -0.09
C9orf3-214ENST00000473778 RTEL1-TNFRSF6BF6WH68 1400 aa14.5□□□□□ -0.09
C9orf3-214ENST00000473778 KNSTRNQ9Y448 316 aa14.49□□□□□ -0.09
C9orf3-214ENST00000473778 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
C9orf3-214ENST00000473778 SCAPERQ9BY12 1400 aa14.49□□□□□ -0.09
C9orf3-214ENST00000473778 ANO8Q9HCE9 1232 aaPredicted RBP14.49□□□□□ -0.09
C9orf3-214ENST00000473778 VWDEQ8N2E2 1590 aa14.49□□□□□ -0.09
C9orf3-214ENST00000473778 INO80Q9ULG1 1556 aaPredicted RBP14.49□□□□□ -0.09
C9orf3-214ENST00000473778 MROH1Q8NDA8 1641 aa14.48□□□□□ -0.09
C9orf3-214ENST00000473778 ZNF521Q96K83 1311 aa14.48□□□□□ -0.09
C9orf3-214ENST00000473778 PDE4AP27815 886 aa14.48□□□□□ -0.09
C9orf3-214ENST00000473778 ATP7AQ04656 1500 aa14.47□□□□□ -0.09
C9orf3-214ENST00000473778 ARAP3Q8WWN8 1544 aa14.47□□□□□ -0.09
C9orf3-214ENST00000473778 DUSP27Q5VZP5 1158 aa14.47□□□□□ -0.09
C9orf3-214ENST00000473778 ASXL1Q8IXJ9 1541 aa14.47□□□□□ -0.09
C9orf3-214ENST00000473778 ABCA9Q8IUA7 1624 aa14.47□□□□□ -0.09
C9orf3-214ENST00000473778 TCERG1O14776 1098 aaKnown RBP14.47□□□□□ -0.09
C9orf3-214ENST00000473778 DEKP35659 375 aaKnown RBP14.47□□□□□ -0.09
C9orf3-214ENST00000473778 BACH2Q9BYV9 841 aa14.46□□□□□ -0.09
C9orf3-214ENST00000473778 NPM2Q86SE8 214 aaKnown RBP14.46□□□□□ -0.1
C9orf3-214ENST00000473778 FANCAO15360 1455 aa14.46□□□□□ -0.1
C9orf3-214ENST00000473778 ABCA6Q8N139 1617 aa14.45□□□□□ -0.1
C9orf3-214ENST00000473778 KIF3BO15066 747 aa14.45□□□□□ -0.1
C9orf3-214ENST00000473778 CFAP70Q5T0N1 1121 aa14.45□□□□□ -0.1
C9orf3-214ENST00000473778 ADGRF5Q8IZF2 1346 aa14.44□□□□□ -0.1
C9orf3-214ENST00000473778 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-214ENST00000473778 KIAA1210Q9ULL0 1709 aa14.44□□□□□ -0.1
C9orf3-214ENST00000473778 MROH2AA6NES4 1674 aa14.44□□□□□ -0.1
C9orf3-214ENST00000473778 KDM5AP29375 1690 aaKnown RBP14.44□□□□□ -0.1
C9orf3-214ENST00000473778 CCDC146Q8IYE0 955 aa14.44□□□□□ -0.1
C9orf3-214ENST00000473778 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-214ENST00000473778 MAP3K4Q9Y6R4 1608 aa14.44□□□□□ -0.1
C9orf3-214ENST00000473778 ERVK-7P63135 1459 aa14.43□□□□□ -0.1
C9orf3-214ENST00000473778 PIK3C2GO75747 1445 aa14.43□□□□□ -0.1
C9orf3-214ENST00000473778 WDR43Q15061 677 aaKnown RBP eCLIP14.42□□□□□ -0.1
C9orf3-214ENST00000473778 CARD14Q9BXL6 1004 aa14.42□□□□□ -0.1
C9orf3-214ENST00000473778 IFT172Q9UG01 1749 aa14.42□□□□□ -0.1
C9orf3-214ENST00000473778 KDM2BQ8NHM5 1336 aa14.42□□□□□ -0.1
C9orf3-214ENST00000473778 MS4A1P11836 297 aa14.41□□□□□ -0.1
C9orf3-214ENST00000473778 ADGRL1O94910 1474 aa14.4□□□□□ -0.1
C9orf3-214ENST00000473778 CDCA8Q53HL2 280 aa14.4□□□□□ -0.1
C9orf3-214ENST00000473778 PPRC1Q5VV67 1664 aaKnown RBP14.4□□□□□ -0.1
C9orf3-214ENST00000473778 NPC1L1Q9UHC9 1359 aa14.4□□□□□ -0.1
C9orf3-214ENST00000473778 NEURL4Q96JN8 1562 aa14.39□□□□□ -0.11
C9orf3-214ENST00000473778 GOLGA2Q08379 1002 aa14.39□□□□□ -0.11
C9orf3-214ENST00000473778 KIDINS220Q9ULH0 1771 aa14.39□□□□□ -0.11
C9orf3-214ENST00000473778 KIF1BO60333 1816 aa14.39□□□□□ -0.11
C9orf3-214ENST00000473778 SLFN5Q08AF3 891 aa14.39□□□□□ -0.11
C9orf3-214ENST00000473778 STAC3Q96MF2 364 aa14.39□□□□□ -0.11
C9orf3-214ENST00000473778 MYOM2P54296 1465 aa14.39□□□□□ -0.11
C9orf3-214ENST00000473778 EFCAB6Q5THR3 1501 aa14.39□□□□□ -0.11
C9orf3-214ENST00000473778 EIF3AQ14152 1382 aaKnown RBP14.38□□□□□ -0.11
C9orf3-214ENST00000473778 KANK1Q14678 1352 aa14.38□□□□□ -0.11
C9orf3-214ENST00000473778 APAF1O14727 1248 aa14.38□□□□□ -0.11
C9orf3-214ENST00000473778 TRMT2AQ8IZ69 625 aaKnown RBP14.38□□□□□ -0.11
C9orf3-214ENST00000473778 CFAP65Q6ZU64 1925 aaKnown RBP14.37□□□□□ -0.11
C9orf3-214ENST00000473778 NRXN1Q9ULB1 1477 aa14.35□□□□□ -0.11
C9orf3-214ENST00000473778 MYO3AQ8NEV4 1616 aa14.35□□□□□ -0.11
C9orf3-214ENST00000473778 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
C9orf3-214ENST00000473778 BCAR3O75815 825 aa14.34□□□□□ -0.11
C9orf3-214ENST00000473778 LAS1LQ9Y4W2 734 aaKnown RBP14.33□□□□□ -0.11
C9orf3-214ENST00000473778 NOS1P29475 1434 aa14.33□□□□□ -0.11
C9orf3-214ENST00000473778 ASXL2Q76L83 1435 aa14.33□□□□□ -0.11
C9orf3-214ENST00000473778 ADGRB3O60242 1522 aa14.32□□□□□ -0.12
C9orf3-214ENST00000473778 NKTRP30414 1462 aaKnown RBP14.32□□□□□ -0.12
C9orf3-214ENST00000473778 SHPRHQ149N8 1683 aa14.31□□□□□ -0.12
C9orf3-214ENST00000473778 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-214ENST00000473778 ZC3H13Q5T200 1668 aaKnown RBP14.31□□□□□ -0.12
C9orf3-214ENST00000473778 NPATQ14207 1427 aa14.3□□□□□ -0.12
C9orf3-214ENST00000473778 FRMPD1Q5SYB0 1578 aa14.3□□□□□ -0.12
C9orf3-214ENST00000473778 KCNA4P22459 653 aa14.3□□□□□ -0.12
C9orf3-214ENST00000473778 C8orf34Q49A92 452 aa14.3□□□□□ -0.12
C9orf3-214ENST00000473778 LMTK2Q8IWU2 1503 aa14.3□□□□□ -0.12
C9orf3-214ENST00000473778 PPLO60437 1756 aa14.29□□□□□ -0.12
C9orf3-214ENST00000473778 TRAK1Q9UPV9 953 aa14.29□□□□□ -0.12
C9orf3-214ENST00000473778 SBNO2Q9Y2G9 1366 aa14.29□□□□□ -0.12
C9orf3-214ENST00000473778 TMEM132EQ6IEE7 984 aa14.29□□□□□ -0.12
C9orf3-214ENST00000473778 SLC12A5Q9H2X9 1139 aa14.29□□□□□ -0.12
C9orf3-214ENST00000473778 ADGRB1O14514 1584 aa14.28□□□□□ -0.12
C9orf3-214ENST00000473778 QRICH2Q9H0J4 1663 aa14.28□□□□□ -0.12
C9orf3-214ENST00000473778 SETBP1Q9Y6X0 1596 aa14.28□□□□□ -0.12
C9orf3-214ENST00000473778 NSD3Q9BZ95 1437 aa14.28□□□□□ -0.12
C9orf3-214ENST00000473778 CHGAP10645 457 aaKnown RBP14.27□□□□□ -0.12
C9orf3-214ENST00000473778 TNNT2P45379 298 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-214ENST00000473778 CENPJQ9HC77 1338 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-214ENST00000473778 SLC4A3P48751 1232 aa14.27□□□□□ -0.13
C9orf3-214ENST00000473778 OSCARQ8IYS5 282 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms