RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
TPM3-216ENST00000473036 TMEM131LA2VDJ0 1609 aa19.59■□□□□ 0.73
TPM3-216ENST00000473036 MPHOSPH9Q99550 1183 aa19.59■□□□□ 0.73
TPM3-216ENST00000473036 SLIT1O75093 1534 aa19.58■□□□□ 0.73
TPM3-216ENST00000473036 SCAF11Q99590 1463 aaKnown RBP19.57■□□□□ 0.72
TPM3-216ENST00000473036 LTKP29376 864 aa19.57■□□□□ 0.72
TPM3-216ENST00000473036 CLTCL1P53675 1640 aa19.57■□□□□ 0.72
TPM3-216ENST00000473036 TRPM2O94759 1503 aa19.56■□□□□ 0.72
TPM3-216ENST00000473036 STRCP1A6NGW2 1772 aa19.54■□□□□ 0.72
TPM3-216ENST00000473036 TMEM2Q9UHN6 1383 aa19.54■□□□□ 0.72
TPM3-216ENST00000473036 HRCP23327 699 aa19.52■□□□□ 0.72
TPM3-216ENST00000473036 ZFYVE9O95405 1425 aa19.51■□□□□ 0.71
TPM3-216ENST00000473036 STAG3Q9UJ98 1225 aa19.5■□□□□ 0.71
TPM3-216ENST00000473036 EID1Q9Y6B2 187 aa19.5■□□□□ 0.71
TPM3-216ENST00000473036 TXNDC2Q86VQ3 553 aa19.49■□□□□ 0.71
TPM3-216ENST00000473036 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
TPM3-216ENST00000473036 CHGAP10645 457 aaKnown RBP19.47■□□□□ 0.71
TPM3-216ENST00000473036 FAM135BQ49AJ0 1406 aa19.47■□□□□ 0.71
TPM3-216ENST00000473036 RIMS2Q9UQ26 1411 aa19.46■□□□□ 0.71
TPM3-216ENST00000473036 KIF1BO60333 1816 aa19.45■□□□□ 0.7
TPM3-216ENST00000473036 ACIN1Q9UKV3 1341 aaKnown RBP19.45■□□□□ 0.7
TPM3-216ENST00000473036 NUTM2DQ5VT03 806 aaPredicted RBP19.44■□□□□ 0.7
TPM3-216ENST00000473036 ANKRD30BQ9BXX2 1392 aa19.42■□□□□ 0.7
TPM3-216ENST00000473036 NEXMIFQ5QGS0 1516 aa19.41■□□□□ 0.7
TPM3-216ENST00000473036 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
TPM3-216ENST00000473036 SPATA31E1Q6ZUB1 1445 aa19.4■□□□□ 0.7
TPM3-216ENST00000473036 XIRP1Q702N8 1843 aaKnown RBP19.39■□□□□ 0.69
TPM3-216ENST00000473036 CCDC144AA2RUR9 1427 aa19.38■□□□□ 0.69
TPM3-216ENST00000473036 KCNA6P17658 529 aa19.38■□□□□ 0.69
TPM3-216ENST00000473036 RGS17Q9UGC6 210 aaPredicted RBP19.38■□□□□ 0.69
TPM3-216ENST00000473036 PLEKHG1Q9ULL1 1385 aa19.37■□□□□ 0.69
TPM3-216ENST00000473036 NRXN3Q9Y4C0 1643 aa19.36■□□□□ 0.69
TPM3-216ENST00000473036 NKTRP30414 1462 aaKnown RBP19.36■□□□□ 0.69
TPM3-216ENST00000473036 SLC26A8Q96RN1 970 aa19.36■□□□□ 0.69
TPM3-216ENST00000473036 ADAMTS13Q76LX8 1427 aa19.35■□□□□ 0.69
TPM3-216ENST00000473036 TMEM94Q12767 1356 aa19.35■□□□□ 0.69
TPM3-216ENST00000473036 PPLO60437 1756 aa19.35■□□□□ 0.69
TPM3-216ENST00000473036 ZNF326Q5BKZ1 582 aaKnown RBP19.35■□□□□ 0.69
TPM3-216ENST00000473036 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.33■□□□□ 0.68
TPM3-216ENST00000473036 IFT172Q9UG01 1749 aa19.33■□□□□ 0.68
TPM3-216ENST00000473036 NWD1Q149M9 1564 aa19.32■□□□□ 0.68
TPM3-216ENST00000473036 PPP1R15AO75807 674 aaPredicted RBP19.31■□□□□ 0.68
TPM3-216ENST00000473036 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
TPM3-216ENST00000473036 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
TPM3-216ENST00000473036 SETBP1Q9Y6X0 1596 aa19.3■□□□□ 0.68
TPM3-216ENST00000473036 ROBO1Q9Y6N7 1651 aa19.3■□□□□ 0.68
TPM3-216ENST00000473036 HDGFP51858 240 aaKnown RBP19.29■□□□□ 0.68
TPM3-216ENST00000473036 MSH6P52701 1360 aa19.29■□□□□ 0.68
TPM3-216ENST00000473036 DHX57Q6P158 1386 aaKnown RBP19.29■□□□□ 0.68
TPM3-216ENST00000473036 CHD2O14647 1828 aaKnown RBP19.28■□□□□ 0.68
TPM3-216ENST00000473036 SETD1AO15047 1707 aaKnown RBP19.28■□□□□ 0.68
TPM3-216ENST00000473036 RPGRIP1LQ68CZ1 1315 aa19.27■□□□□ 0.68
TPM3-216ENST00000473036 NCOA3Q9Y6Q9 1424 aa19.27■□□□□ 0.68
TPM3-216ENST00000473036 ADGRF5Q8IZF2 1346 aa19.26■□□□□ 0.67
TPM3-216ENST00000473036 BCANQ96GW7 911 aa19.26■□□□□ 0.67
TPM3-216ENST00000473036 TBX22Q9Y458 520 aa19.26■□□□□ 0.67
TPM3-216ENST00000473036 PTPRUQ92729 1446 aa19.25■□□□□ 0.67
TPM3-216ENST00000473036 POTEAQ6S8J7 498 aa19.25■□□□□ 0.67
TPM3-216ENST00000473036 PCGF6Q9BYE7 350 aa19.25■□□□□ 0.67
TPM3-216ENST00000473036 DIP2AQ14689 1571 aa19.24■□□□□ 0.67
TPM3-216ENST00000473036 JCADQ9P266 1359 aa19.24■□□□□ 0.67
TPM3-216ENST00000473036 SLAIN2Q9P270 581 aa19.24■□□□□ 0.67
TPM3-216ENST00000473036 METP08581 1390 aa19.23■□□□□ 0.67
TPM3-216ENST00000473036 VGFO15240 615 aaPredicted RBP19.21■□□□□ 0.67
TPM3-216ENST00000473036 RBM33Q96EV2 1170 aaKnown RBP19.2■□□□□ 0.66
TPM3-216ENST00000473036 SIN3AQ96ST3 1273 aa19.2■□□□□ 0.66
TPM3-216ENST00000473036 NRXN1Q9ULB1 1477 aa19.2■□□□□ 0.66
TPM3-216ENST00000473036 SPATA31A6Q5VVP1 1343 aa19.19■□□□□ 0.66
TPM3-216ENST00000473036 PIK3C2GO75747 1445 aa19.18■□□□□ 0.66
TPM3-216ENST00000473036 PHLPP1O60346 1717 aa19.18■□□□□ 0.66
TPM3-216ENST00000473036 XRN1Q8IZH2 1706 aaKnown RBP19.18■□□□□ 0.66
TPM3-216ENST00000473036 MYOM2P54296 1465 aa19.17■□□□□ 0.66
TPM3-216ENST00000473036 ASXL1Q8IXJ9 1541 aa19.17■□□□□ 0.66
TPM3-216ENST00000473036 PIK3R4Q99570 1358 aa19.17■□□□□ 0.66
TPM3-216ENST00000473036 AMOTL2Q9Y2J4 779 aa19.15■□□□□ 0.66
TPM3-216ENST00000473036 CADPS2Q86UW7 1296 aa19.14■□□□□ 0.65
TPM3-216ENST00000473036 COL16A1Q07092 1604 aaPredicted RBP19.14■□□□□ 0.65
TPM3-216ENST00000473036 ZNF772Q68DY9 489 aaPredicted RBP19.13■□□□□ 0.65
TPM3-216ENST00000473036 DCAF11Q8TEB1 546 aa19.12■□□□□ 0.65
TPM3-216ENST00000473036 AHDC1Q5TGY3 1603 aaPredicted RBP19.11■□□□□ 0.65
TPM3-216ENST00000473036 C19orf44Q9H6X5 657 aa19.11■□□□□ 0.65
TPM3-216ENST00000473036 KDM2AQ9Y2K7 1162 aa19.11■□□□□ 0.65
TPM3-216ENST00000473036 CFAP70Q5T0N1 1121 aa19.1■□□□□ 0.65
TPM3-216ENST00000473036 TMEM132EQ6IEE7 984 aa19.1■□□□□ 0.65
TPM3-216ENST00000473036 C14orf93Q9H972 538 aaKnown RBP19.1■□□□□ 0.65
TPM3-216ENST00000473036 NEUROD1Q13562 356 aa19.08■□□□□ 0.64
TPM3-216ENST00000473036 DCCP43146 1447 aa19.08■□□□□ 0.64
TPM3-216ENST00000473036 SHPRHQ149N8 1683 aa19.08■□□□□ 0.64
TPM3-216ENST00000473036 ROBO2Q9HCK4 1378 aa19.07■□□□□ 0.64
TPM3-216ENST00000473036 ATF3P18847 181 aa19.07■□□□□ 0.64
TPM3-216ENST00000473036 L3MBTL2Q969R5 705 aa19.07■□□□□ 0.64
TPM3-216ENST00000473036 PRAG1Q86YV5 1406 aa19.07■□□□□ 0.64
TPM3-216ENST00000473036 C14orf37Q86TY3 774 aa19.06■□□□□ 0.64
TPM3-216ENST00000473036 ADGRB1O14514 1584 aa19.06■□□□□ 0.64
TPM3-216ENST00000473036 CDK12Q9NYV4 1490 aaPredicted RBP19.05■□□□□ 0.64
TPM3-216ENST00000473036 MEX3CQ5U5Q3 659 aaKnown RBP19.05■□□□□ 0.64
TPM3-216ENST00000473036 LRP6O75581 1613 aa19.04■□□□□ 0.64
TPM3-216ENST00000473036 LAMC1P11047 1609 aa19.04■□□□□ 0.64
TPM3-216ENST00000473036 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.04■□□□□ 0.64
TPM3-216ENST00000473036 PTCH1Q13635 1447 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms