RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 GPRASP1Q5JY77 1395 aa38.69■■■■□ 3.78
HOXB3-207ENST00000472863 NUTM2DQ5VT03 806 aaPredicted RBP38.68■■■■□ 3.78
HOXB3-207ENST00000472863 STAG3Q9UJ98 1225 aa38.67■■■■□ 3.78
HOXB3-207ENST00000472863 TNRQ92752 1358 aa38.66■■■■□ 3.78
HOXB3-207ENST00000472863 NRXN1Q9ULB1 1477 aa38.65■■■■□ 3.78
HOXB3-207ENST00000472863 NEXMIFQ5QGS0 1516 aa38.64■■■■□ 3.78
HOXB3-207ENST00000472863 PLPPR3Q6T4P5 718 aa38.64■■■■□ 3.78
HOXB3-207ENST00000472863 C3P01024 1663 aa38.62■■■■□ 3.77
HOXB3-207ENST00000472863 CFAP70Q5T0N1 1121 aa38.62■■■■□ 3.77
HOXB3-207ENST00000472863 C11orf95C9JLR9 678 aaPredicted RBP38.61■■■■□ 3.77
HOXB3-207ENST00000472863 VGFO15240 615 aaPredicted RBP38.59■■■■□ 3.77
HOXB3-207ENST00000472863 ST20-MTHFSA0A0A6YYL1 179 aa38.58■■■■□ 3.77
HOXB3-207ENST00000472863 DDX10Q13206 875 aaKnown RBP38.58■■■■□ 3.77
HOXB3-207ENST00000472863 A2ML1A8K2U0 1454 aa38.58■■■■□ 3.77
HOXB3-207ENST00000472863 LAMC1P11047 1609 aa38.57■■■■□ 3.77
HOXB3-207ENST00000472863 WASHC2AQ641Q2 1341 aa38.56■■■■□ 3.76
HOXB3-207ENST00000472863 PIK3C2GO75747 1445 aa38.56■■■■□ 3.76
HOXB3-207ENST00000472863 KIAA1210Q9ULL0 1709 aa38.55■■■■□ 3.76
HOXB3-207ENST00000472863 C14orf93Q9H972 538 aaKnown RBP38.5■■■■□ 3.75
HOXB3-207ENST00000472863 ADAMTSL3P82987 1691 aa38.5■■■■□ 3.75
HOXB3-207ENST00000472863 ZFYVE9O95405 1425 aa38.5■■■■□ 3.75
HOXB3-207ENST00000472863 RIMS1Q86UR5 1692 aaKnown RBP38.49■■■■□ 3.75
HOXB3-207ENST00000472863 SENP3Q9H4L4 574 aaPredicted RBP38.48■■■■□ 3.75
HOXB3-207ENST00000472863 CCDC7Q96M83 1385 aa38.44■■■■□ 3.74
HOXB3-207ENST00000472863 KIF7Q2M1P5 1343 aa38.43■■■■□ 3.74
HOXB3-207ENST00000472863 RIMS2Q9UQ26 1411 aa38.43■■■■□ 3.74
HOXB3-207ENST00000472863 NLRP1Q9C000 1473 aa38.42■■■■□ 3.74
HOXB3-207ENST00000472863 SCAF11Q99590 1463 aaKnown RBP38.41■■■■□ 3.74
HOXB3-207ENST00000472863 IQGAP1P46940 1657 aa38.41■■■■□ 3.74
HOXB3-207ENST00000472863 UBR1Q8IWV7 1749 aa38.39■■■■□ 3.74
HOXB3-207ENST00000472863 TMEM132EQ6IEE7 984 aa38.39■■■■□ 3.74
HOXB3-207ENST00000472863 MIER1Q8N108 512 aa38.38■■■■□ 3.73
HOXB3-207ENST00000472863 KDM5AP29375 1690 aaKnown RBP38.36■■■■□ 3.73
HOXB3-207ENST00000472863 SETBP1Q9Y6X0 1596 aa38.36■■■■□ 3.73
HOXB3-207ENST00000472863 TESK2Q96S53 571 aa38.35■■■■□ 3.73
HOXB3-207ENST00000472863 POLR1AO95602 1720 aaPredicted RBP38.34■■■■□ 3.73
HOXB3-207ENST00000472863 ADGRB1O14514 1584 aa38.33■■■■□ 3.73
HOXB3-207ENST00000472863 TMEM2Q9UHN6 1383 aa38.31■■■■□ 3.72
HOXB3-207ENST00000472863 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.31■■■■□ 3.72
HOXB3-207ENST00000472863 POLR3GLQ9BT43 218 aa38.3■■■■□ 3.72
HOXB3-207ENST00000472863 HDGFP51858 240 aaKnown RBP38.27■■■■□ 3.72
HOXB3-207ENST00000472863 TRAK1Q9UPV9 953 aa38.27■■■■□ 3.72
HOXB3-207ENST00000472863 MYO3AQ8NEV4 1616 aa38.25■■■■□ 3.71
HOXB3-207ENST00000472863 EIF3AQ14152 1382 aaKnown RBP38.25■■■■□ 3.71
HOXB3-207ENST00000472863 ALKQ9UM73 1620 aa38.23■■■■□ 3.71
HOXB3-207ENST00000472863 DISP3Q9P2K9 1392 aa38.21■■■■□ 3.71
HOXB3-207ENST00000472863 ASXL1Q8IXJ9 1541 aa38.2■■■■□ 3.71
HOXB3-207ENST00000472863 LTKP29376 864 aa38.2■■■■□ 3.71
HOXB3-207ENST00000472863 THEMISQ8N1K5 641 aaPredicted RBP38.19■■■■□ 3.7
HOXB3-207ENST00000472863 TMF1P82094 1093 aa38.18■■■■□ 3.7
HOXB3-207ENST00000472863 PTPRMP28827 1452 aa38.18■■■■□ 3.7
HOXB3-207ENST00000472863 TXNDC2Q86VQ3 553 aa38.16■■■■□ 3.7
HOXB3-207ENST00000472863 STK26Q9P289 416 aa38.15■■■■□ 3.7
HOXB3-207ENST00000472863 CEP170BQ9Y4F5 1589 aaPredicted RBP38.14■■■■□ 3.7
HOXB3-207ENST00000472863 NRXN3Q9Y4C0 1643 aa38.13■■■■□ 3.7
HOXB3-207ENST00000472863 SETD1BQ9UPS6 1966 aaKnown RBP38.13■■■■□ 3.69
HOXB3-207ENST00000472863 SLIT1O75093 1534 aa38.12■■■■□ 3.69
HOXB3-207ENST00000472863 ARHGAP23Q9P227 1491 aa38.12■■■■□ 3.69
HOXB3-207ENST00000472863 BCANQ96GW7 911 aa38.12■■■■□ 3.69
HOXB3-207ENST00000472863 CENPJQ9HC77 1338 aaPredicted RBP38.11■■■■□ 3.69
HOXB3-207ENST00000472863 EID1Q9Y6B2 187 aa38.11■■■■□ 3.69
HOXB3-207ENST00000472863 SETD1AO15047 1707 aaKnown RBP38.08■■■■□ 3.69
HOXB3-207ENST00000472863 YTHDC2Q9H6S0 1430 aaKnown RBP38.08■■■■□ 3.69
HOXB3-207ENST00000472863 PLEKHG1Q9ULL1 1385 aa38.05■■■■□ 3.68
HOXB3-207ENST00000472863 ARHGEF28Q8N1W1 1705 aaKnown RBP38.04■■■■□ 3.68
HOXB3-207ENST00000472863 METP08581 1390 aa38.04■■■■□ 3.68
HOXB3-207ENST00000472863 ANP32CO43423 234 aa38.01■■■■□ 3.68
HOXB3-207ENST00000472863 SBNO2Q9Y2G9 1366 aa38■■■■□ 3.67
HOXB3-207ENST00000472863 ZNF142P52746 1687 aaPredicted RBP38■■■■□ 3.67
HOXB3-207ENST00000472863 ADAMTS13Q76LX8 1427 aa38■■■■□ 3.67
HOXB3-207ENST00000472863 QRICH2Q9H0J4 1663 aa37.99■■■■□ 3.67
HOXB3-207ENST00000472863 SLC24A1O60721 1099 aa37.99■■■■□ 3.67
HOXB3-207ENST00000472863 SAFB2Q14151 953 aaKnown RBP eCLIP37.98■■■■□ 3.67
HOXB3-207ENST00000472863 CDCA8Q53HL2 280 aa37.97■■■■□ 3.67
HOXB3-207ENST00000472863 LRPPRCP42704 1394 aaKnown RBP37.96■■■■□ 3.67
HOXB3-207ENST00000472863 PRAM1Q96QH2 718 aa37.95■■■■□ 3.67
HOXB3-207ENST00000472863 SLC26A8Q96RN1 970 aa37.95■■■■□ 3.67
HOXB3-207ENST00000472863 KDM4FA0A1W2PPD8 638 aa37.93■■■■□ 3.66
HOXB3-207ENST00000472863 ABCC11Q96J66 1382 aa37.91■■■■□ 3.66
HOXB3-207ENST00000472863 POGKQ9P215 609 aa37.91■■■■□ 3.66
HOXB3-207ENST00000472863 MED14O60244 1454 aa37.9■■■■□ 3.66
HOXB3-207ENST00000472863 ANKLE2Q86XL3 938 aa37.88■■■■□ 3.65
HOXB3-207ENST00000472863 WAPLQ7Z5K2 1190 aa37.87■■■■□ 3.65
HOXB3-207ENST00000472863 DLC1Q96QB1 1528 aa37.85■■■■□ 3.65
HOXB3-207ENST00000472863 TBX22Q9Y458 520 aa37.85■■■■□ 3.65
HOXB3-207ENST00000472863 PANK3Q9H999 370 aa37.84■■■■□ 3.65
HOXB3-207ENST00000472863 MINK1Q8N4C8 1332 aaPredicted RBP37.83■■■■□ 3.65
HOXB3-207ENST00000472863 PLEKHH1Q9ULM0 1364 aa37.82■■■■□ 3.64
HOXB3-207ENST00000472863 EVC2Q86UK5 1308 aa37.81■■■■□ 3.64
HOXB3-207ENST00000472863 TULP4Q9NRJ4 1543 aa37.79■■■■□ 3.64
HOXB3-207ENST00000472863 CNGB1Q14028 1251 aaPredicted RBP37.79■■■■□ 3.64
HOXB3-207ENST00000472863 PRKRIP1Q9H875 184 aaPredicted RBP37.79■■■■□ 3.64
HOXB3-207ENST00000472863 PER1O15534 1290 aaPredicted RBP37.78■■■■□ 3.64
HOXB3-207ENST00000472863 TECPR2O15040 1411 aa37.77■■■■□ 3.64
HOXB3-207ENST00000472863 PTPRUQ92729 1446 aa37.77■■■■□ 3.64
HOXB3-207ENST00000472863 MYOM1P52179 1685 aa37.75■■■■□ 3.63
HOXB3-207ENST00000472863 SIRT1Q96EB6 747 aa37.75■■■■□ 3.63
HOXB3-207ENST00000472863 KNDC1Q76NI1 1749 aa37.74■■■■□ 3.63
HOXB3-207ENST00000472863 CABP2Q9NPB3 220 aa37.73■■■■□ 3.63
HOXB3-207ENST00000472863 DIP2AQ14689 1571 aa37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms