RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 NEXMIFQ5QGS0 1516 aa23.24■■□□□ 1.31
PCOLCE-205ENST00000472348 MYOM2P54296 1465 aa23.24■■□□□ 1.31
PCOLCE-205ENST00000472348 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.22■■□□□ 1.31
PCOLCE-205ENST00000472348 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
PCOLCE-205ENST00000472348 POLR1AO95602 1720 aaPredicted RBP23.19■■□□□ 1.3
PCOLCE-205ENST00000472348 NRXN1Q9ULB1 1477 aa23.18■■□□□ 1.3
PCOLCE-205ENST00000472348 VGFO15240 615 aaPredicted RBP23.18■■□□□ 1.3
PCOLCE-205ENST00000472348 RIMS2Q9UQ26 1411 aa23.17■■□□□ 1.3
PCOLCE-205ENST00000472348 CHGAP10645 457 aaKnown RBP23.17■■□□□ 1.3
PCOLCE-205ENST00000472348 NEUROD1Q13562 356 aa23.17■■□□□ 1.3
PCOLCE-205ENST00000472348 MED14O60244 1454 aa23.17■■□□□ 1.3
PCOLCE-205ENST00000472348 STRCQ7RTU9 1775 aa23.16■■□□□ 1.3
PCOLCE-205ENST00000472348 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
PCOLCE-205ENST00000472348 SCAF11Q99590 1463 aaKnown RBP23.15■■□□□ 1.3
PCOLCE-205ENST00000472348 KIAA1210Q9ULL0 1709 aa23.14■■□□□ 1.3
PCOLCE-205ENST00000472348 EID1Q9Y6B2 187 aa23.14■■□□□ 1.29
PCOLCE-205ENST00000472348 LAMC1P11047 1609 aa23.13■■□□□ 1.29
PCOLCE-205ENST00000472348 RGL3Q3MIN7 710 aa23.13■■□□□ 1.29
PCOLCE-205ENST00000472348 ANKLE2Q86XL3 938 aa23.13■■□□□ 1.29
PCOLCE-205ENST00000472348 L3MBTL2Q969R5 705 aa23.13■■□□□ 1.29
PCOLCE-205ENST00000472348 SETBP1Q9Y6X0 1596 aa23.12■■□□□ 1.29
PCOLCE-205ENST00000472348 ZEB1P37275 1124 aaPredicted RBP23.11■■□□□ 1.29
PCOLCE-205ENST00000472348 PLEKHG1Q9ULL1 1385 aa23.11■■□□□ 1.29
PCOLCE-205ENST00000472348 PIK3C2GO75747 1445 aa23.09■■□□□ 1.29
PCOLCE-205ENST00000472348 DCAF11Q8TEB1 546 aa23.09■■□□□ 1.29
PCOLCE-205ENST00000472348 DIP2AQ14689 1571 aa23.09■■□□□ 1.29
PCOLCE-205ENST00000472348 TXNDC2Q86VQ3 553 aa23.08■■□□□ 1.29
PCOLCE-205ENST00000472348 PRAG1Q86YV5 1406 aa23.07■■□□□ 1.28
PCOLCE-205ENST00000472348 PPP1R15AO75807 674 aaPredicted RBP23.06■■□□□ 1.28
PCOLCE-205ENST00000472348 LTKP29376 864 aa23.06■■□□□ 1.28
PCOLCE-205ENST00000472348 IQGAP1P46940 1657 aa23.06■■□□□ 1.28
PCOLCE-205ENST00000472348 NRXN3Q9Y4C0 1643 aa23.05■■□□□ 1.28
PCOLCE-205ENST00000472348 NCKAP5LQ9HCH0 1330 aa23.04■■□□□ 1.28
PCOLCE-205ENST00000472348 SETD1AO15047 1707 aaKnown RBP23.03■■□□□ 1.28
PCOLCE-205ENST00000472348 TRPM1Q7Z4N2 1603 aa23.02■■□□□ 1.28
PCOLCE-205ENST00000472348 ADGRF5Q8IZF2 1346 aa23.02■■□□□ 1.28
PCOLCE-205ENST00000472348 NPHP4O75161 1426 aaPredicted RBP23.01■■□□□ 1.27
PCOLCE-205ENST00000472348 DMRT2Q9Y5R5 561 aa23.01■■□□□ 1.27
PCOLCE-205ENST00000472348 PIK3R4Q99570 1358 aa23.01■■□□□ 1.27
PCOLCE-205ENST00000472348 ALKQ9UM73 1620 aa23■■□□□ 1.27
PCOLCE-205ENST00000472348 C14orf93Q9H972 538 aaKnown RBP22.99■■□□□ 1.27
PCOLCE-205ENST00000472348 TBX22Q9Y458 520 aa22.99■■□□□ 1.27
PCOLCE-205ENST00000472348 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
PCOLCE-205ENST00000472348 KDM2AQ9Y2K7 1162 aa22.97■■□□□ 1.27
PCOLCE-205ENST00000472348 RALGAPBQ86X10 1494 aa22.97■■□□□ 1.27
PCOLCE-205ENST00000472348 GPRASP1Q5JY77 1395 aa22.95■■□□□ 1.26
PCOLCE-205ENST00000472348 ADGRB1O14514 1584 aa22.93■■□□□ 1.26
PCOLCE-205ENST00000472348 CHD2O14647 1828 aaKnown RBP22.92■■□□□ 1.26
PCOLCE-205ENST00000472348 NBPF8Q3BBV2 869 aa22.91■■□□□ 1.26
PCOLCE-205ENST00000472348 KNDC1Q76NI1 1749 aa22.91■■□□□ 1.26
PCOLCE-205ENST00000472348 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
PCOLCE-205ENST00000472348 ILDR1Q86SU0 546 aaPredicted RBP22.9■■□□□ 1.26
PCOLCE-205ENST00000472348 NWD1Q149M9 1564 aa22.88■■□□□ 1.25
PCOLCE-205ENST00000472348 ASXL1Q8IXJ9 1541 aa22.87■■□□□ 1.25
PCOLCE-205ENST00000472348 CFAP70Q5T0N1 1121 aa22.87■■□□□ 1.25
PCOLCE-205ENST00000472348 TECPR2O15040 1411 aa22.87■■□□□ 1.25
PCOLCE-205ENST00000472348 XRN1Q8IZH2 1706 aaKnown RBP22.86■■□□□ 1.25
PCOLCE-205ENST00000472348 CERKQ8TCT0 537 aa22.86■■□□□ 1.25
PCOLCE-205ENST00000472348 DLC1Q96QB1 1528 aa22.86■■□□□ 1.25
PCOLCE-205ENST00000472348 SIRT1Q96EB6 747 aa22.85■■□□□ 1.25
PCOLCE-205ENST00000472348 ABCC11Q96J66 1382 aa22.85■■□□□ 1.25
PCOLCE-205ENST00000472348 ZNF335Q9H4Z2 1342 aaPredicted RBP22.84■■□□□ 1.25
PCOLCE-205ENST00000472348 ROCK2O75116 1388 aaKnown RBP22.84■■□□□ 1.25
PCOLCE-205ENST00000472348 LRPPRCP42704 1394 aaKnown RBP22.84■■□□□ 1.25
PCOLCE-205ENST00000472348 LTBP4Q8N2S1 1624 aa22.83■■□□□ 1.25
PCOLCE-205ENST00000472348 BCANQ96GW7 911 aa22.83■■□□□ 1.25
PCOLCE-205ENST00000472348 YTHDC2Q9H6S0 1430 aaKnown RBP22.82■■□□□ 1.24
PCOLCE-205ENST00000472348 METP08581 1390 aa22.82■■□□□ 1.24
PCOLCE-205ENST00000472348 CPS1P31327 1500 aa22.82■■□□□ 1.24
PCOLCE-205ENST00000472348 NKTRP30414 1462 aaKnown RBP22.81■■□□□ 1.24
PCOLCE-205ENST00000472348 SLC26A8Q96RN1 970 aa22.81■■□□□ 1.24
PCOLCE-205ENST00000472348 PTCH1Q13635 1447 aa22.81■■□□□ 1.24
PCOLCE-205ENST00000472348 FAM135BQ49AJ0 1406 aa22.8■■□□□ 1.24
PCOLCE-205ENST00000472348 KCNA6P17658 529 aa22.79■■□□□ 1.24
PCOLCE-205ENST00000472348 FBXO41Q8TF61 875 aa22.79■■□□□ 1.24
PCOLCE-205ENST00000472348 NBPF1Q3BBV0 1214 aa22.78■■□□□ 1.24
PCOLCE-205ENST00000472348 ARHGEF28Q8N1W1 1705 aaKnown RBP22.78■■□□□ 1.24
PCOLCE-205ENST00000472348 EIF3AQ14152 1382 aaKnown RBP22.76■■□□□ 1.23
PCOLCE-205ENST00000472348 PTPRUQ92729 1446 aa22.76■■□□□ 1.23
PCOLCE-205ENST00000472348 NCOA3Q9Y6Q9 1424 aa22.76■■□□□ 1.23
PCOLCE-205ENST00000472348 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
PCOLCE-205ENST00000472348 SLC24A1O60721 1099 aa22.75■■□□□ 1.23
PCOLCE-205ENST00000472348 STRCP1A6NGW2 1772 aa22.73■■□□□ 1.23
PCOLCE-205ENST00000472348 TMEM132EQ6IEE7 984 aa22.73■■□□□ 1.23
PCOLCE-205ENST00000472348 AMOTL2Q9Y2J4 779 aa22.73■■□□□ 1.23
PCOLCE-205ENST00000472348 SBNO2Q9Y2G9 1366 aa22.73■■□□□ 1.23
PCOLCE-205ENST00000472348 SENP3Q9H4L4 574 aaPredicted RBP22.68■■□□□ 1.22
PCOLCE-205ENST00000472348 USP47Q96K76 1375 aa22.67■■□□□ 1.22
PCOLCE-205ENST00000472348 EIF4G2P78344 907 aaKnown RBP eCLIP22.66■■□□□ 1.22
PCOLCE-205ENST00000472348 PHF23Q9BUL5 403 aaPredicted RBP22.66■■□□□ 1.22
PCOLCE-205ENST00000472348 ADGRB2O60241 1585 aa22.66■■□□□ 1.22
PCOLCE-205ENST00000472348 ROBO2Q9HCK4 1378 aa22.65■■□□□ 1.22
PCOLCE-205ENST00000472348 QRICH2Q9H0J4 1663 aa22.65■■□□□ 1.22
PCOLCE-205ENST00000472348 TRAK1Q9UPV9 953 aa22.64■■□□□ 1.21
PCOLCE-205ENST00000472348 CENPJQ9HC77 1338 aaPredicted RBP22.63■■□□□ 1.21
PCOLCE-205ENST00000472348 IQSEC2Q5JU85 1478 aa22.63■■□□□ 1.21
PCOLCE-205ENST00000472348 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
PCOLCE-205ENST00000472348 XIRP1Q702N8 1843 aaKnown RBP22.61■■□□□ 1.21
PCOLCE-205ENST00000472348 STK26Q9P289 416 aa22.61■■□□□ 1.21
PCOLCE-205ENST00000472348 DCCP43146 1447 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms