RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 CLUAP1Q96AJ1 413 aa15.45■□□□□ 0.06
IRF1-208ENST00000472045 HSP90AB1P08238 724 aaKnown RBP15.45■□□□□ 0.06
IRF1-208ENST00000472045 NUTM2BA6NNL0 878 aaPredicted RBP15.44■□□□□ 0.06
IRF1-208ENST00000472045 NUTM2EB1AL46 878 aaPredicted RBP15.44■□□□□ 0.06
IRF1-208ENST00000472045 NUTM2AQ8IVF1 878 aaPredicted RBP15.44■□□□□ 0.06
IRF1-208ENST00000472045 DAPK1P53355 1430 aa15.44■□□□□ 0.06
IRF1-208ENST00000472045 PDE3BQ13370 1112 aa15.44■□□□□ 0.06
IRF1-208ENST00000472045 USP35Q9P2H5 1018 aa15.44■□□□□ 0.06
IRF1-208ENST00000472045 EIF2S2P20042 333 aaKnown RBP15.44■□□□□ 0.06
IRF1-208ENST00000472045 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
IRF1-208ENST00000472045 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
IRF1-208ENST00000472045 CCDC141Q6ZP82 1450 aa15.43■□□□□ 0.06
IRF1-208ENST00000472045 TIAM1Q13009 1591 aa15.42■□□□□ 0.06
IRF1-208ENST00000472045 RPGRIP1LQ68CZ1 1315 aa15.42■□□□□ 0.06
IRF1-208ENST00000472045 STRN4Q9NRL3 753 aa15.41■□□□□ 0.06
IRF1-208ENST00000472045 KIAA1107Q9UPP5 1409 aa15.41■□□□□ 0.06
IRF1-208ENST00000472045 KIF14Q15058 1648 aa15.41■□□□□ 0.06
IRF1-208ENST00000472045 ERBINQ96RT1 1412 aa15.4■□□□□ 0.06
IRF1-208ENST00000472045 DENND4BO75064 1496 aaPredicted RBP15.4■□□□□ 0.06
IRF1-208ENST00000472045 KLHL34Q8N239 644 aa15.4■□□□□ 0.06
IRF1-208ENST00000472045 AKNAQ7Z591 1439 aa15.4■□□□□ 0.06
IRF1-208ENST00000472045 RIPK4P57078 832 aa15.39■□□□□ 0.05
IRF1-208ENST00000472045 PRKRIP1Q9H875 184 aaPredicted RBP15.38■□□□□ 0.05
IRF1-208ENST00000472045 HMOX1P09601 288 aa15.38■□□□□ 0.05
IRF1-208ENST00000472045 ANP32EQ9BTT0 268 aa15.38■□□□□ 0.05
IRF1-208ENST00000472045 CDK19Q9BWU1 502 aa15.38■□□□□ 0.05
IRF1-208ENST00000472045 DDX58O95786 925 aaKnown RBP15.37■□□□□ 0.05
IRF1-208ENST00000472045 TRIM6-TRIM34B2RNG4 842 aa15.37■□□□□ 0.05
IRF1-208ENST00000472045 E9PSI1 815 aa15.37■□□□□ 0.05
IRF1-208ENST00000472045 APAF1O14727 1248 aa15.37■□□□□ 0.05
IRF1-208ENST00000472045 SF3B2Q13435 895 aaKnown RBP15.37■□□□□ 0.05
IRF1-208ENST00000472045 ANKRD30BQ9BXX2 1392 aa15.37■□□□□ 0.05
IRF1-208ENST00000472045 HSCBQ8IWL3 235 aa15.36■□□□□ 0.05
IRF1-208ENST00000472045 NECTIN2Q92692 538 aa15.36■□□□□ 0.05
IRF1-208ENST00000472045 GNL2Q13823 731 aaKnown RBP15.36■□□□□ 0.05
IRF1-208ENST00000472045 ZNF692Q9BU19 519 aaPredicted RBP15.36■□□□□ 0.05
IRF1-208ENST00000472045 RTEL1-TNFRSF6BF6WH68 1400 aa15.36■□□□□ 0.05
IRF1-208ENST00000472045 CEBPAP49715 358 aaPredicted RBP15.35■□□□□ 0.05
IRF1-208ENST00000472045 FANCAO15360 1455 aa15.35■□□□□ 0.05
IRF1-208ENST00000472045 SMG6Q86US8 1419 aaKnown RBP15.35■□□□□ 0.05
IRF1-208ENST00000472045 C9orf78Q9NZ63 289 aaPredicted RBP15.35■□□□□ 0.05
IRF1-208ENST00000472045 TSPYL4Q9UJ04 414 aa15.34■□□□□ 0.05
IRF1-208ENST00000472045 NBPF1Q3BBV0 1214 aa15.34■□□□□ 0.05
IRF1-208ENST00000472045 BCL2L13Q9BXK5 485 aa15.34■□□□□ 0.05
IRF1-208ENST00000472045 GOLGA6L4A6NEF3 574 aa15.34■□□□□ 0.05
IRF1-208ENST00000472045 CAMSAP2Q08AD1 1489 aa15.34■□□□□ 0.05
IRF1-208ENST00000472045 DMRT2Q9Y5R5 561 aa15.33■□□□□ 0.05
IRF1-208ENST00000472045 KIF7Q2M1P5 1343 aa15.33■□□□□ 0.05
IRF1-208ENST00000472045 PCF11O94913 1555 aaKnown RBP15.33■□□□□ 0.05
IRF1-208ENST00000472045 RUNDC1Q96C34 613 aa15.33■□□□□ 0.04
IRF1-208ENST00000472045 PRDM11Q9NQV5 511 aa15.33■□□□□ 0.04
IRF1-208ENST00000472045 CABP1Q9NZU7 370 aa15.33■□□□□ 0.04
IRF1-208ENST00000472045 TOM1L2Q6ZVM7 507 aa15.33■□□□□ 0.04
IRF1-208ENST00000472045 PLEKHO1Q53GL0 409 aaPredicted RBP15.32■□□□□ 0.04
IRF1-208ENST00000472045 TATP17735 454 aaPredicted RBP15.32■□□□□ 0.04
IRF1-208ENST00000472045 TEX14Q8IWB6 1497 aa15.32■□□□□ 0.04
IRF1-208ENST00000472045 CCDC7Q96M83 1385 aa15.32■□□□□ 0.04
IRF1-208ENST00000472045 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
IRF1-208ENST00000472045 ZKSCAN2Q63HK3 967 aa15.31■□□□□ 0.04
IRF1-208ENST00000472045 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
IRF1-208ENST00000472045 GNAI1P63096 354 aa15.31■□□□□ 0.04
IRF1-208ENST00000472045 TOMM22Q9NS69 142 aa15.3■□□□□ 0.04
IRF1-208ENST00000472045 ROCK1Q13464 1354 aa15.3■□□□□ 0.04
IRF1-208ENST00000472045 XPCQ01831 940 aaPredicted RBP15.3■□□□□ 0.04
IRF1-208ENST00000472045 FKBP5Q13451 457 aaPredicted RBP15.3■□□□□ 0.04
IRF1-208ENST00000472045 FBXO31Q5XUX0 539 aaPredicted RBP15.3■□□□□ 0.04
IRF1-208ENST00000472045 MTHFSP49914 203 aa15.29■□□□□ 0.04
IRF1-208ENST00000472045 GAS2L2Q8NHY3 880 aa15.29■□□□□ 0.04
IRF1-208ENST00000472045 ASXL2Q76L83 1435 aa15.29■□□□□ 0.04
IRF1-208ENST00000472045 SLC12A5Q9H2X9 1139 aa15.28■□□□□ 0.04
IRF1-208ENST00000472045 BIVM-ERCC5R4GMW8 1640 aa15.28■□□□□ 0.04
IRF1-208ENST00000472045 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
IRF1-208ENST00000472045 TCERG1O14776 1098 aaKnown RBP15.27■□□□□ 0.04
IRF1-208ENST00000472045 API5Q9BZZ5 524 aaKnown RBP15.27■□□□□ 0.04
IRF1-208ENST00000472045 CLSTN1O94985 981 aa15.27■□□□□ 0.04
IRF1-208ENST00000472045 NOL10Q9BSC4 688 aaKnown RBP15.27■□□□□ 0.04
IRF1-208ENST00000472045 WASHC2AQ641Q2 1341 aa15.26■□□□□ 0.03
IRF1-208ENST00000472045 VPS37DQ86XT2 251 aa15.26■□□□□ 0.03
IRF1-208ENST00000472045 RIC3Q7Z5B4 369 aa15.26■□□□□ 0.03
IRF1-208ENST00000472045 ATAD2Q6PL18 1390 aa15.25■□□□□ 0.03
IRF1-208ENST00000472045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.25■□□□□ 0.03
IRF1-208ENST00000472045 AIMP1Q12904 312 aaKnown RBP15.25■□□□□ 0.03
IRF1-208ENST00000472045 ERICH6BQ5W0A0 696 aa15.25■□□□□ 0.03
IRF1-208ENST00000472045 DDX54Q8TDD1 881 aaKnown RBP15.25■□□□□ 0.03
IRF1-208ENST00000472045 FBXW7Q969H0 707 aa15.25■□□□□ 0.03
IRF1-208ENST00000472045 HSP90B1P14625 803 aaKnown RBP15.25■□□□□ 0.03
IRF1-208ENST00000472045 RBM33Q96EV2 1170 aaKnown RBP15.25■□□□□ 0.03
IRF1-208ENST00000472045 PTMAP06454 111 aaKnown RBP15.24■□□□□ 0.03
IRF1-208ENST00000472045 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.24■□□□□ 0.03
IRF1-208ENST00000472045 NUDT16Q96DE0 195 aaKnown RBP15.24■□□□□ 0.03
IRF1-208ENST00000472045 ABCC5O15440 1437 aa15.23■□□□□ 0.03
IRF1-208ENST00000472045 SPG7Q9UQ90 795 aa15.23■□□□□ 0.03
IRF1-208ENST00000472045 LRRFIP1Q32MZ4 808 aaKnown RBP15.23■□□□□ 0.03
IRF1-208ENST00000472045 TRIM34Q9BYJ4 488 aa15.23■□□□□ 0.03
IRF1-208ENST00000472045 AMOTL2Q9Y2J4 779 aa15.23■□□□□ 0.03
IRF1-208ENST00000472045 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
IRF1-208ENST00000472045 IDI1Q13907 227 aa15.22■□□□□ 0.03
IRF1-208ENST00000472045 PRKAR2BP31323 418 aa15.22■□□□□ 0.03
IRF1-208ENST00000472045 ZC3H6P61129 1189 aaKnown RBP15.22■□□□□ 0.03
IRF1-208ENST00000472045 TRIM44Q96DX7 344 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms