RNA–Protein interactions for RNA: ENST00000471294.1

HDLBP-234, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-234ENST00000471294 NEXMIFQ5QGS0 1516 aa17.32■□□□□ 0.36
HDLBP-234ENST00000471294 TMEM2Q9UHN6 1383 aa17.32■□□□□ 0.36
HDLBP-234ENST00000471294 VGFO15240 615 aaPredicted RBP17.32■□□□□ 0.36
HDLBP-234ENST00000471294 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.32■□□□□ 0.36
HDLBP-234ENST00000471294 MYO5BQ9ULV0 1848 aa17.32■□□□□ 0.36
HDLBP-234ENST00000471294 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
HDLBP-234ENST00000471294 RGL3Q3MIN7 710 aa17.31■□□□□ 0.36
HDLBP-234ENST00000471294 CHGAP10645 457 aaKnown RBP17.3■□□□□ 0.36
HDLBP-234ENST00000471294 ZNF326Q5BKZ1 582 aaKnown RBP17.3■□□□□ 0.36
HDLBP-234ENST00000471294 DCAF11Q8TEB1 546 aa17.3■□□□□ 0.36
HDLBP-234ENST00000471294 RIMS2Q9UQ26 1411 aa17.29■□□□□ 0.36
HDLBP-234ENST00000471294 PRAG1Q86YV5 1406 aa17.28■□□□□ 0.36
HDLBP-234ENST00000471294 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
HDLBP-234ENST00000471294 KIAA1210Q9ULL0 1709 aa17.25■□□□□ 0.35
HDLBP-234ENST00000471294 PIK3C2GO75747 1445 aa17.25■□□□□ 0.35
HDLBP-234ENST00000471294 EID1Q9Y6B2 187 aa17.24■□□□□ 0.35
HDLBP-234ENST00000471294 LAMC1P11047 1609 aa17.22■□□□□ 0.35
HDLBP-234ENST00000471294 PLEKHG1Q9ULL1 1385 aa17.22■□□□□ 0.35
HDLBP-234ENST00000471294 RALGAPBQ86X10 1494 aa17.22■□□□□ 0.35
HDLBP-234ENST00000471294 LMTK3Q96Q04 1460 aa17.22■□□□□ 0.35
HDLBP-234ENST00000471294 SCAF11Q99590 1463 aaKnown RBP17.22■□□□□ 0.35
HDLBP-234ENST00000471294 SETBP1Q9Y6X0 1596 aa17.22■□□□□ 0.35
HDLBP-234ENST00000471294 ADGRF5Q8IZF2 1346 aa17.21■□□□□ 0.34
HDLBP-234ENST00000471294 MED14O60244 1454 aa17.2■□□□□ 0.34
HDLBP-234ENST00000471294 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
HDLBP-234ENST00000471294 ANKLE2Q86XL3 938 aa17.2■□□□□ 0.34
HDLBP-234ENST00000471294 KDM2AQ9Y2K7 1162 aa17.2■□□□□ 0.34
HDLBP-234ENST00000471294 TRPM1Q7Z4N2 1603 aa17.19■□□□□ 0.34
HDLBP-234ENST00000471294 NBPF8Q3BBV2 869 aa17.19■□□□□ 0.34
HDLBP-234ENST00000471294 TXNDC2Q86VQ3 553 aa17.19■□□□□ 0.34
HDLBP-234ENST00000471294 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
HDLBP-234ENST00000471294 DIP2AQ14689 1571 aa17.18■□□□□ 0.34
HDLBP-234ENST00000471294 LTKP29376 864 aa17.17■□□□□ 0.34
HDLBP-234ENST00000471294 POLR1AO95602 1720 aaPredicted RBP17.16■□□□□ 0.34
HDLBP-234ENST00000471294 NRXN3Q9Y4C0 1643 aa17.14■□□□□ 0.33
HDLBP-234ENST00000471294 ALKQ9UM73 1620 aa17.14■□□□□ 0.33
HDLBP-234ENST00000471294 TBX22Q9Y458 520 aa17.13■□□□□ 0.33
HDLBP-234ENST00000471294 ROCK2O75116 1388 aaKnown RBP17.13■□□□□ 0.33
HDLBP-234ENST00000471294 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
HDLBP-234ENST00000471294 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
HDLBP-234ENST00000471294 SETD1AO15047 1707 aaKnown RBP17.12■□□□□ 0.33
HDLBP-234ENST00000471294 ADGRB1O14514 1584 aa17.11■□□□□ 0.33
HDLBP-234ENST00000471294 NPHP4O75161 1426 aaPredicted RBP17.11■□□□□ 0.33
HDLBP-234ENST00000471294 CFAP70Q5T0N1 1121 aa17.1■□□□□ 0.33
HDLBP-234ENST00000471294 NUTM2DQ5VT03 806 aaPredicted RBP17.1■□□□□ 0.33
HDLBP-234ENST00000471294 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
HDLBP-234ENST00000471294 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
HDLBP-234ENST00000471294 CARD11Q9BXL7 1154 aa17.07■□□□□ 0.32
HDLBP-234ENST00000471294 ABCC11Q96J66 1382 aa17.06■□□□□ 0.32
HDLBP-234ENST00000471294 SIRT1Q96EB6 747 aa17.06■□□□□ 0.32
HDLBP-234ENST00000471294 ASXL1Q8IXJ9 1541 aa17.06■□□□□ 0.32
HDLBP-234ENST00000471294 TECPR2O15040 1411 aa17.05■□□□□ 0.32
HDLBP-234ENST00000471294 STRCQ7RTU9 1775 aa17.05■□□□□ 0.32
HDLBP-234ENST00000471294 LRPPRCP42704 1394 aaKnown RBP17.05■□□□□ 0.32
HDLBP-234ENST00000471294 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
HDLBP-234ENST00000471294 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
HDLBP-234ENST00000471294 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
HDLBP-234ENST00000471294 DLC1Q96QB1 1528 aa17.05■□□□□ 0.32
HDLBP-234ENST00000471294 HSPA2P54652 639 aa17.04■□□□□ 0.32
HDLBP-234ENST00000471294 EIF4G2P78344 907 aaKnown RBP eCLIP17.04■□□□□ 0.32
HDLBP-234ENST00000471294 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
HDLBP-234ENST00000471294 NCKAP5LQ9HCH0 1330 aa17.03■□□□□ 0.32
HDLBP-234ENST00000471294 KNDC1Q76NI1 1749 aa17.03■□□□□ 0.32
HDLBP-234ENST00000471294 METP08581 1390 aa17.02■□□□□ 0.32
HDLBP-234ENST00000471294 USP47Q96K76 1375 aa17.02■□□□□ 0.32
HDLBP-234ENST00000471294 BCANQ96GW7 911 aa17.02■□□□□ 0.32
HDLBP-234ENST00000471294 FAM135BQ49AJ0 1406 aa17.01■□□□□ 0.31
HDLBP-234ENST00000471294 SBNO2Q9Y2G9 1366 aa17.01■□□□□ 0.31
HDLBP-234ENST00000471294 PTCH1Q13635 1447 aa17■□□□□ 0.31
HDLBP-234ENST00000471294 CPS1P31327 1500 aa17■□□□□ 0.31
HDLBP-234ENST00000471294 CHD2O14647 1828 aaKnown RBP16.99■□□□□ 0.31
HDLBP-234ENST00000471294 AEBP2Q6ZN18 517 aaPredicted RBP16.99■□□□□ 0.31
HDLBP-234ENST00000471294 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
HDLBP-234ENST00000471294 XRN1Q8IZH2 1706 aaKnown RBP16.99■□□□□ 0.31
HDLBP-234ENST00000471294 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
HDLBP-234ENST00000471294 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
HDLBP-234ENST00000471294 ARHGEF28Q8N1W1 1705 aaKnown RBP16.97■□□□□ 0.31
HDLBP-234ENST00000471294 KCNA6P17658 529 aa16.96■□□□□ 0.31
HDLBP-234ENST00000471294 PTPRUQ92729 1446 aa16.96■□□□□ 0.3
HDLBP-234ENST00000471294 NKTRP30414 1462 aaKnown RBP16.95■□□□□ 0.3
HDLBP-234ENST00000471294 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
HDLBP-234ENST00000471294 AMOTL2Q9Y2J4 779 aa16.94■□□□□ 0.3
HDLBP-234ENST00000471294 CENPJQ9HC77 1338 aaPredicted RBP16.94■□□□□ 0.3
HDLBP-234ENST00000471294 ST20-MTHFSA0A0A6YYL1 179 aa16.93■□□□□ 0.3
HDLBP-234ENST00000471294 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
HDLBP-234ENST00000471294 NCOA3Q9Y6Q9 1424 aa16.93■□□□□ 0.3
HDLBP-234ENST00000471294 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
HDLBP-234ENST00000471294 TESK2Q96S53 571 aa16.91■□□□□ 0.3
HDLBP-234ENST00000471294 ROBO2Q9HCK4 1378 aa16.89■□□□□ 0.3
HDLBP-234ENST00000471294 STK26Q9P289 416 aa16.89■□□□□ 0.29
HDLBP-234ENST00000471294 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
HDLBP-234ENST00000471294 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
HDLBP-234ENST00000471294 CDCA8Q53HL2 280 aa16.88■□□□□ 0.29
HDLBP-234ENST00000471294 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
HDLBP-234ENST00000471294 POGKQ9P215 609 aa16.88■□□□□ 0.29
HDLBP-234ENST00000471294 ADGRB2O60241 1585 aa16.87■□□□□ 0.29
HDLBP-234ENST00000471294 TMF1P82094 1093 aa16.87■□□□□ 0.29
HDLBP-234ENST00000471294 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
HDLBP-234ENST00000471294 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
HDLBP-234ENST00000471294 STRCP1A6NGW2 1772 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms