RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 ADGRL2O95490 1459 aa12.33□□□□□ -0.44
FDPS-209ENST00000471117 LRP5O75197 1615 aa12.33□□□□□ -0.44
FDPS-209ENST00000471117 CFAP65Q6ZU64 1925 aaKnown RBP12.33□□□□□ -0.44
FDPS-209ENST00000471117 HFM1A2PYH4 1435 aa12.32□□□□□ -0.44
FDPS-209ENST00000471117 SHPRHQ149N8 1683 aa12.32□□□□□ -0.44
FDPS-209ENST00000471117 ANKRD30AQ9BXX3 1397 aa12.31□□□□□ -0.44
FDPS-209ENST00000471117 LTKP29376 864 aa12.31□□□□□ -0.44
FDPS-209ENST00000471117 RRP7BPQ9NSQ0 103 aa12.31□□□□□ -0.44
FDPS-209ENST00000471117 SCAF11Q99590 1463 aaKnown RBP12.31□□□□□ -0.44
FDPS-209ENST00000471117 DHX57Q6P158 1386 aaKnown RBP12.3□□□□□ -0.44
FDPS-209ENST00000471117 NAIPQ13075 1403 aa12.29□□□□□ -0.44
FDPS-209ENST00000471117 TXNDC2Q86VQ3 553 aa12.29□□□□□ -0.44
FDPS-209ENST00000471117 WASHC2CQ9Y4E1 1318 aa12.28□□□□□ -0.44
FDPS-209ENST00000471117 RTEL1-TNFRSF6BF6WH68 1400 aa12.28□□□□□ -0.44
FDPS-209ENST00000471117 KIF3BO15066 747 aa12.27□□□□□ -0.45
FDPS-209ENST00000471117 C8orf37Q96NL8 207 aa12.27□□□□□ -0.45
FDPS-209ENST00000471117 MSH6P52701 1360 aa12.27□□□□□ -0.45
FDPS-209ENST00000471117 UBR1Q8IWV7 1749 aa12.26□□□□□ -0.45
FDPS-209ENST00000471117 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
FDPS-209ENST00000471117 KIF15Q9NS87 1388 aa12.26□□□□□ -0.45
FDPS-209ENST00000471117 KCNA6P17658 529 aa12.25□□□□□ -0.45
FDPS-209ENST00000471117 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
FDPS-209ENST00000471117 NGLY1Q96IV0 654 aa12.24□□□□□ -0.45
FDPS-209ENST00000471117 DUOX2Q9NRD8 1548 aa12.23□□□□□ -0.45
FDPS-209ENST00000471117 ANKRD50Q9ULJ7 1429 aa12.23□□□□□ -0.45
FDPS-209ENST00000471117 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
FDPS-209ENST00000471117 PRDM15P57071 1507 aaPredicted RBP12.22□□□□□ -0.45
FDPS-209ENST00000471117 SENP3-EIF4A1A0A087X0R7 540 aa12.22□□□□□ -0.45
FDPS-209ENST00000471117 CCDC125Q86Z20 511 aa12.22□□□□□ -0.45
FDPS-209ENST00000471117 SLC26A8Q96RN1 970 aa12.22□□□□□ -0.45
FDPS-209ENST00000471117 DEFB132Q7Z7B7 95 aa12.21□□□□□ -0.45
FDPS-209ENST00000471117 EID1Q9Y6B2 187 aa12.21□□□□□ -0.45
FDPS-209ENST00000471117 KDM5AP29375 1690 aaKnown RBP12.2□□□□□ -0.46
FDPS-209ENST00000471117 AHDC1Q5TGY3 1603 aaPredicted RBP12.2□□□□□ -0.46
FDPS-209ENST00000471117 DIP2AQ14689 1571 aa12.2□□□□□ -0.46
FDPS-209ENST00000471117 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
FDPS-209ENST00000471117 DHX29Q7Z478 1369 aaKnown RBP12.19□□□□□ -0.46
FDPS-209ENST00000471117 ARHGAP23Q9P227 1491 aa12.19□□□□□ -0.46
FDPS-209ENST00000471117 NWD1Q149M9 1564 aa12.18□□□□□ -0.46
FDPS-209ENST00000471117 SLIT1O75093 1534 aa12.17□□□□□ -0.46
FDPS-209ENST00000471117 EIF2AK4Q9P2K8 1649 aaKnown RBP12.17□□□□□ -0.46
FDPS-209ENST00000471117 EP400Q96L91 3159 aa12.17□□□□□ -0.46
FDPS-209ENST00000471117 ERVK-7P63135 1459 aa12.16□□□□□ -0.46
FDPS-209ENST00000471117 NHSL1Q5SYE7 1610 aa12.16□□□□□ -0.46
FDPS-209ENST00000471117 ADAMTS2O95450 1211 aa12.16□□□□□ -0.46
FDPS-209ENST00000471117 UNC13BO14795 1591 aa12.15□□□□□ -0.46
FDPS-209ENST00000471117 C14orf37Q86TY3 774 aa12.15□□□□□ -0.46
FDPS-209ENST00000471117 ABCC3O15438 1527 aa12.15□□□□□ -0.46
FDPS-209ENST00000471117 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
FDPS-209ENST00000471117 USP21Q9UK80 565 aa12.13□□□□□ -0.47
FDPS-209ENST00000471117 MROH1Q8NDA8 1641 aa12.12□□□□□ -0.47
FDPS-209ENST00000471117 TRPC5Q9UL62 973 aaPredicted RBP12.12□□□□□ -0.47
FDPS-209ENST00000471117 NUP155O75694 1391 aa12.12□□□□□ -0.47
FDPS-209ENST00000471117 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
FDPS-209ENST00000471117 BRINP3Q76B58 766 aa12.11□□□□□ -0.47
FDPS-209ENST00000471117 BCANQ96GW7 911 aa12.11□□□□□ -0.47
FDPS-209ENST00000471117 MPHOSPH9Q99550 1183 aa12.11□□□□□ -0.47
FDPS-209ENST00000471117 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
FDPS-209ENST00000471117 IQGAP3Q86VI3 1631 aa12.11□□□□□ -0.47
FDPS-209ENST00000471117 TET3O43151 1660 aa12.1□□□□□ -0.47
FDPS-209ENST00000471117 TMEM2Q9UHN6 1383 aa12.1□□□□□ -0.47
FDPS-209ENST00000471117 SIN3AQ96ST3 1273 aa12.1□□□□□ -0.47
FDPS-209ENST00000471117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.471e-9■□□□□ 9.9
FDPS-209ENST00000471117 KANK1Q14678 1352 aa12.09□□□□□ -0.47
FDPS-209ENST00000471117 ATF3P18847 181 aa12.09□□□□□ -0.47
FDPS-209ENST00000471117 SF3B2Q13435 895 aaKnown RBP12.09□□□□□ -0.47
FDPS-209ENST00000471117 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
FDPS-209ENST00000471117 STAG3Q9UJ98 1225 aa12.09□□□□□ -0.47
FDPS-209ENST00000471117 CHD2O14647 1828 aaKnown RBP12.09□□□□□ -0.47
FDPS-209ENST00000471117 BCL9LQ86UU0 1499 aa12.08□□□□□ -0.47
FDPS-209ENST00000471117 PIK3C2BO00750 1634 aa12.08□□□□□ -0.48
FDPS-209ENST00000471117 NEUROD1Q13562 356 aa12.08□□□□□ -0.48
FDPS-209ENST00000471117 CEP152O94986 1710 aa12.07□□□□□ -0.48
FDPS-209ENST00000471117 CADPS2Q86UW7 1296 aa12.07□□□□□ -0.48
FDPS-209ENST00000471117 DDX17Q92841 729 aaKnown RBP12.07□□□□□ -0.48
FDPS-209ENST00000471117 LRRC59Q96AG4 307 aaKnown RBP12.07□□□□□ -0.48
FDPS-209ENST00000471117 PNPLA6Q8IY17 1366 aa12.06□□□□□ -0.48
FDPS-209ENST00000471117 ATRNO75882 1429 aa12.06□□□□□ -0.48
FDPS-209ENST00000471117 BRWD3Q6RI45 1802 aa12.06□□□□□ -0.48
FDPS-209ENST00000471117 C1QTNF8P60827 252 aa12.04□□□□□ -0.48
FDPS-209ENST00000471117 R3HDM1Q15032 1099 aaKnown RBP12.04□□□□□ -0.48
FDPS-209ENST00000471117 ZNF784Q8NCA9 323 aaPredicted RBP12.04□□□□□ -0.48
FDPS-209ENST00000471117 ASXL1Q8IXJ9 1541 aa12.03□□□□□ -0.48
FDPS-209ENST00000471117 C19orf44Q9H6X5 657 aa12.03□□□□□ -0.48
FDPS-209ENST00000471117 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
FDPS-209ENST00000471117 LMTK2Q8IWU2 1503 aa12.02□□□□□ -0.48
FDPS-209ENST00000471117 E9PCH4 1651 aa12.01□□□□□ -0.49
FDPS-209ENST00000471117 FNBP4Q8N3X1 1017 aaPredicted RBP12.01□□□□□ -0.49
FDPS-209ENST00000471117 EFCAB6Q5THR3 1501 aa12.01□□□□□ -0.49
FDPS-209ENST00000471117 DCAF8L1A6NGE4 600 aa12□□□□□ -0.49
FDPS-209ENST00000471117 ANKRD30BQ9BXX2 1392 aa12□□□□□ -0.49
FDPS-209ENST00000471117 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
FDPS-209ENST00000471117 GJD4Q96KN9 370 aaPredicted RBP11.99□□□□□ -0.49
FDPS-209ENST00000471117 NCOA3Q9Y6Q9 1424 aa11.99□□□□□ -0.49
FDPS-209ENST00000471117 SPHKAPQ2M3C7 1700 aa11.98□□□□□ -0.49
FDPS-209ENST00000471117 TONSLQ96HA7 1378 aa11.98□□□□□ -0.49
FDPS-209ENST00000471117 PPP1R15AO75807 674 aaPredicted RBP11.97□□□□□ -0.49
FDPS-209ENST00000471117 BAG6P46379 1132 aa11.97□□□□□ -0.49
FDPS-209ENST00000471117 CAMTA1Q9Y6Y1 1673 aa11.97□□□□□ -0.49
FDPS-209ENST00000471117 IDI1Q13907 227 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms