RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 SETD5Q9C0A6 1442 aa22.98■■□□□ 1.27
FDPS-208ENST00000470171 CFAP65Q6ZU64 1925 aaKnown RBP22.98■■□□□ 1.27
FDPS-208ENST00000470171 KCNA6P17658 529 aa22.97■■□□□ 1.27
FDPS-208ENST00000470171 BCANQ96GW7 911 aa22.97■■□□□ 1.27
FDPS-208ENST00000470171 TBX22Q9Y458 520 aa22.97■■□□□ 1.27
FDPS-208ENST00000470171 TMEM131LA2VDJ0 1609 aa22.95■■□□□ 1.26
FDPS-208ENST00000470171 UBAP1LF5GYI3 381 aa22.94■■□□□ 1.26
FDPS-208ENST00000470171 TRPM2O94759 1503 aa22.93■■□□□ 1.26
FDPS-208ENST00000470171 RPGRIP1LQ68CZ1 1315 aa22.93■■□□□ 1.26
FDPS-208ENST00000470171 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
FDPS-208ENST00000470171 PIK3R4Q99570 1358 aa22.92■■□□□ 1.26
FDPS-208ENST00000470171 ZNF326Q5BKZ1 582 aaKnown RBP22.9■■□□□ 1.26
FDPS-208ENST00000470171 SLC26A8Q96RN1 970 aa22.9■■□□□ 1.26
FDPS-208ENST00000470171 VGFO15240 615 aaPredicted RBP22.88■■□□□ 1.25
FDPS-208ENST00000470171 LRRC7Q96NW7 1537 aa22.87■■□□□ 1.25
FDPS-208ENST00000470171 SPHKAPQ2M3C7 1700 aa22.85■■□□□ 1.25
FDPS-208ENST00000470171 NKTRP30414 1462 aaKnown RBP22.85■■□□□ 1.25
FDPS-208ENST00000470171 NCOA3Q9Y6Q9 1424 aa22.84■■□□□ 1.25
FDPS-208ENST00000470171 DIP2AQ14689 1571 aa22.84■■□□□ 1.25
FDPS-208ENST00000470171 CCDC144AA2RUR9 1427 aa22.83■■□□□ 1.25
FDPS-208ENST00000470171 RAB3GAP2Q9H2M9 1393 aa22.83■■□□□ 1.25
FDPS-208ENST00000470171 PROSER2Q86WR7 435 aaPredicted RBP22.82■■□□□ 1.24
FDPS-208ENST00000470171 ADAMTS13Q76LX8 1427 aa22.8■■□□□ 1.24
FDPS-208ENST00000470171 TMEM94Q12767 1356 aa22.77■■□□□ 1.24
FDPS-208ENST00000470171 NUTM2DQ5VT03 806 aaPredicted RBP22.77■■□□□ 1.24
FDPS-208ENST00000470171 CLTCL1P53675 1640 aa22.76■■□□□ 1.23
FDPS-208ENST00000470171 NWD1Q149M9 1564 aa22.76■■□□□ 1.23
FDPS-208ENST00000470171 ANKRD30BQ9BXX2 1392 aa22.75■■□□□ 1.23
FDPS-208ENST00000470171 SETBP1Q9Y6X0 1596 aa22.74■■□□□ 1.23
FDPS-208ENST00000470171 FOXD1Q16676 465 aa22.73■■□□□ 1.23
FDPS-208ENST00000470171 MSH6P52701 1360 aa22.73■■□□□ 1.23
FDPS-208ENST00000470171 PIP4K2BP78356 416 aa22.72■■□□□ 1.23
FDPS-208ENST00000470171 STAC3Q96MF2 364 aa22.72■■□□□ 1.23
FDPS-208ENST00000470171 AMOTL2Q9Y2J4 779 aa22.72■■□□□ 1.23
FDPS-208ENST00000470171 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
FDPS-208ENST00000470171 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
FDPS-208ENST00000470171 C19orf44Q9H6X5 657 aa22.69■■□□□ 1.22
FDPS-208ENST00000470171 SPATA31E1Q6ZUB1 1445 aa22.68■■□□□ 1.22
FDPS-208ENST00000470171 FAM135BQ49AJ0 1406 aa22.67■■□□□ 1.22
FDPS-208ENST00000470171 KIF1BO60333 1816 aa22.67■■□□□ 1.22
FDPS-208ENST00000470171 CADPS2Q86UW7 1296 aa22.67■■□□□ 1.22
FDPS-208ENST00000470171 STRCP1A6NGW2 1772 aa22.67■■□□□ 1.22
FDPS-208ENST00000470171 MYO5BQ9ULV0 1848 aa22.66■■□□□ 1.22
FDPS-208ENST00000470171 C14orf37Q86TY3 774 aa22.65■■□□□ 1.22
FDPS-208ENST00000470171 RGL3Q3MIN7 710 aa22.64■■□□□ 1.21
FDPS-208ENST00000470171 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
FDPS-208ENST00000470171 SLAIN2Q9P270 581 aa22.63■■□□□ 1.21
FDPS-208ENST00000470171 METP08581 1390 aa22.63■■□□□ 1.21
FDPS-208ENST00000470171 ATF3P18847 181 aa22.62■■□□□ 1.21
FDPS-208ENST00000470171 HSPA1LP34931 641 aa22.62■■□□□ 1.21
FDPS-208ENST00000470171 CHD2O14647 1828 aaKnown RBP22.61■■□□□ 1.21
FDPS-208ENST00000470171 DCCP43146 1447 aa22.61■■□□□ 1.21
FDPS-208ENST00000470171 PRAG1Q86YV5 1406 aa22.61■■□□□ 1.21
FDPS-208ENST00000470171 PTPRUQ92729 1446 aa22.6■■□□□ 1.21
FDPS-208ENST00000470171 ALKQ9UM73 1620 aa22.57■■□□□ 1.2
FDPS-208ENST00000470171 NRXN3Q9Y4C0 1643 aa22.57■■□□□ 1.2
FDPS-208ENST00000470171 PTCH1Q13635 1447 aa22.57■■□□□ 1.2
FDPS-208ENST00000470171 RBM33Q96EV2 1170 aaKnown RBP22.56■■□□□ 1.2
FDPS-208ENST00000470171 ADGRF5Q8IZF2 1346 aa22.56■■□□□ 1.2
FDPS-208ENST00000470171 SIRT1Q96EB6 747 aa22.53■■□□□ 1.2
FDPS-208ENST00000470171 MYOM2P54296 1465 aa22.53■■□□□ 1.2
FDPS-208ENST00000470171 PIK3C2GO75747 1445 aa22.52■■□□□ 1.2
FDPS-208ENST00000470171 C14orf93Q9H972 538 aaKnown RBP22.52■■□□□ 1.2
FDPS-208ENST00000470171 XRN1Q8IZH2 1706 aaKnown RBP22.51■■□□□ 1.19
FDPS-208ENST00000470171 ABCC11Q96J66 1382 aa22.5■■□□□ 1.19
FDPS-208ENST00000470171 ADGRL3Q9HAR2 1447 aa22.49■■□□□ 1.19
FDPS-208ENST00000470171 NRXN1Q9ULB1 1477 aa22.49■■□□□ 1.19
FDPS-208ENST00000470171 PPLO60437 1756 aa22.49■■□□□ 1.19
FDPS-208ENST00000470171 LRPPRCP42704 1394 aaKnown RBP22.49■■□□□ 1.19
FDPS-208ENST00000470171 XIRP1Q702N8 1843 aaKnown RBP22.48■■□□□ 1.19
FDPS-208ENST00000470171 TECPR2O15040 1411 aa22.48■■□□□ 1.19
FDPS-208ENST00000470171 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
FDPS-208ENST00000470171 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
FDPS-208ENST00000470171 ROBO2Q9HCK4 1378 aa22.45■■□□□ 1.18
FDPS-208ENST00000470171 DISP3Q9P2K9 1392 aa22.45■■□□□ 1.18
FDPS-208ENST00000470171 DCAF11Q8TEB1 546 aa22.44■■□□□ 1.18
FDPS-208ENST00000470171 YTHDC2Q9H6S0 1430 aaKnown RBP22.4■■□□□ 1.18
FDPS-208ENST00000470171 CFAP70Q5T0N1 1121 aa22.39■■□□□ 1.17
FDPS-208ENST00000470171 BRINP3Q76B58 766 aa22.39■■□□□ 1.17
FDPS-208ENST00000470171 MST1RQ04912 1400 aa22.39■■□□□ 1.17
FDPS-208ENST00000470171 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.38■■□□□ 1.17
FDPS-208ENST00000470171 IFT172Q9UG01 1749 aa22.38■■□□□ 1.17
FDPS-208ENST00000470171 STK26Q9P289 416 aa22.38■■□□□ 1.17
FDPS-208ENST00000470171 JCADQ9P266 1359 aa22.38■■□□□ 1.17
FDPS-208ENST00000470171 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
FDPS-208ENST00000470171 ROBO1Q9Y6N7 1651 aa22.37■■□□□ 1.17
FDPS-208ENST00000470171 TMEM132EQ6IEE7 984 aa22.37■■□□□ 1.17
FDPS-208ENST00000470171 LAMC1P11047 1609 aa22.37■■□□□ 1.17
FDPS-208ENST00000470171 KDM2AQ9Y2K7 1162 aa22.36■■□□□ 1.17
FDPS-208ENST00000470171 LRRC59Q96AG4 307 aaKnown RBP22.33■■□□□ 1.17
FDPS-208ENST00000470171 SPATA31A6Q5VVP1 1343 aa22.32■■□□□ 1.16
FDPS-208ENST00000470171 C1orf167Q5SNV9 1468 aa22.32■■□□□ 1.16
FDPS-208ENST00000470171 AHDC1Q5TGY3 1603 aaPredicted RBP22.31■■□□□ 1.16
FDPS-208ENST00000470171 PHF23Q9BUL5 403 aaPredicted RBP22.31■■□□□ 1.16
FDPS-208ENST00000470171 WAPLQ7Z5K2 1190 aa22.3■■□□□ 1.16
FDPS-208ENST00000470171 POGKQ9P215 609 aa22.3■■□□□ 1.16
FDPS-208ENST00000470171 DLC1Q96QB1 1528 aa22.3■■□□□ 1.16
FDPS-208ENST00000470171 ASXL1Q8IXJ9 1541 aa22.28■■□□□ 1.16
FDPS-208ENST00000470171 CDC42BPGQ6DT37 1551 aa22.28■■□□□ 1.16
FDPS-208ENST00000470171 PRAM1Q96QH2 718 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms