RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 NCOA3Q9Y6Q9 1424 aa19.16■□□□□ 0.66
LSM2-209ENST00000470083 BCANQ96GW7 911 aa19.15■□□□□ 0.66
LSM2-209ENST00000470083 ADGRB3O60242 1522 aa19.15■□□□□ 0.66
LSM2-209ENST00000470083 LMTK2Q8IWU2 1503 aa19.14■□□□□ 0.65
LSM2-209ENST00000470083 NOS1P29475 1434 aa19.13■□□□□ 0.65
LSM2-209ENST00000470083 AHDC1Q5TGY3 1603 aaPredicted RBP19.13■□□□□ 0.65
LSM2-209ENST00000470083 PLEKHG1Q9ULL1 1385 aa19.12■□□□□ 0.65
LSM2-209ENST00000470083 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
LSM2-209ENST00000470083 CADPS2Q86UW7 1296 aa19.11■□□□□ 0.65
LSM2-209ENST00000470083 SLC52A1Q9NWF4 448 aa19.11■□□□□ 0.65
LSM2-209ENST00000470083 SHPRHQ149N8 1683 aa19.11■□□□□ 0.65
LSM2-209ENST00000470083 ZFYVE9O95405 1425 aa19.09■□□□□ 0.65
LSM2-209ENST00000470083 C14orf37Q86TY3 774 aa19.09■□□□□ 0.65
LSM2-209ENST00000470083 AFF2P51816 1311 aa19.08■□□□□ 0.65
LSM2-209ENST00000470083 C19orf44Q9H6X5 657 aa19.08■□□□□ 0.64
LSM2-209ENST00000470083 ABCC5O15440 1437 aa19.08■□□□□ 0.64
LSM2-209ENST00000470083 ATF3P18847 181 aa19.07■□□□□ 0.64
LSM2-209ENST00000470083 TBX22Q9Y458 520 aa19.07■□□□□ 0.64
LSM2-209ENST00000470083 NUTM2BA6NNL0 878 aaPredicted RBP19.06■□□□□ 0.64
LSM2-209ENST00000470083 NUTM2EB1AL46 878 aaPredicted RBP19.06■□□□□ 0.64
LSM2-209ENST00000470083 NUTM2AQ8IVF1 878 aaPredicted RBP19.06■□□□□ 0.64
LSM2-209ENST00000470083 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
LSM2-209ENST00000470083 HDGFP51858 240 aaKnown RBP19.05■□□□□ 0.64
LSM2-209ENST00000470083 RGS12O14924 1447 aa19.05■□□□□ 0.64
LSM2-209ENST00000470083 DIP2AQ14689 1571 aa19.05■□□□□ 0.64
LSM2-209ENST00000470083 CHD2O14647 1828 aaKnown RBP19.04■□□□□ 0.64
LSM2-209ENST00000470083 BRINP3Q76B58 766 aa19.04■□□□□ 0.64
LSM2-209ENST00000470083 RIMS2Q9UQ26 1411 aa19.04■□□□□ 0.64
LSM2-209ENST00000470083 RBM6P78332 1123 aaKnown RBP19.02■□□□□ 0.64
LSM2-209ENST00000470083 KANK4Q5T7N3 995 aaPredicted RBP19.02■□□□□ 0.64
LSM2-209ENST00000470083 PIK3R4Q99570 1358 aa19.01■□□□□ 0.63
LSM2-209ENST00000470083 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
LSM2-209ENST00000470083 SIPA1L2Q9P2F8 1722 aaPredicted RBP19■□□□□ 0.63
LSM2-209ENST00000470083 CROCC2H7BZ55 1655 aa18.99■□□□□ 0.63
LSM2-209ENST00000470083 RPRD2Q5VT52 1461 aaKnown RBP18.99■□□□□ 0.63
LSM2-209ENST00000470083 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
LSM2-209ENST00000470083 DAPK1P53355 1430 aa18.99■□□□□ 0.63
LSM2-209ENST00000470083 ADAMTS13Q76LX8 1427 aa18.99■□□□□ 0.63
LSM2-209ENST00000470083 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
LSM2-209ENST00000470083 ANKRD30AQ9BXX3 1397 aa18.98■□□□□ 0.63
LSM2-209ENST00000470083 NUTM2DQ5VT03 806 aaPredicted RBP18.98■□□□□ 0.63
LSM2-209ENST00000470083 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
LSM2-209ENST00000470083 DCCP43146 1447 aa18.98■□□□□ 0.63
LSM2-209ENST00000470083 C8orf37Q96NL8 207 aa18.97■□□□□ 0.63
LSM2-209ENST00000470083 ATAD2Q6PL18 1390 aa18.96■□□□□ 0.63
LSM2-209ENST00000470083 ASXL1Q8IXJ9 1541 aa18.96■□□□□ 0.63
LSM2-209ENST00000470083 FOXD1Q16676 465 aa18.96■□□□□ 0.63
LSM2-209ENST00000470083 LRRC59Q96AG4 307 aaKnown RBP18.95■□□□□ 0.62
LSM2-209ENST00000470083 ZRANB1Q9UGI0 708 aa18.94■□□□□ 0.62
LSM2-209ENST00000470083 TMEM131LA2VDJ0 1609 aa18.93■□□□□ 0.62
LSM2-209ENST00000470083 NGLY1Q96IV0 654 aa18.93■□□□□ 0.62
LSM2-209ENST00000470083 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
LSM2-209ENST00000470083 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
LSM2-209ENST00000470083 PTPN23Q9H3S7 1636 aa18.92■□□□□ 0.62
LSM2-209ENST00000470083 PNPLA6Q8IY17 1366 aa18.92■□□□□ 0.62
LSM2-209ENST00000470083 MST1RQ04912 1400 aa18.91■□□□□ 0.62
LSM2-209ENST00000470083 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
LSM2-209ENST00000470083 EP400Q96L91 3159 aa18.89■□□□□ 0.62
LSM2-209ENST00000470083 GCC2Q8IWJ2 1684 aa18.89■□□□□ 0.61
LSM2-209ENST00000470083 TRPM2O94759 1503 aa18.89■□□□□ 0.61
LSM2-209ENST00000470083 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
LSM2-209ENST00000470083 NHSL1Q5SYE7 1610 aa18.87■□□□□ 0.61
LSM2-209ENST00000470083 MYO5BQ9ULV0 1848 aa18.87■□□□□ 0.61
LSM2-209ENST00000470083 SETBP1Q9Y6X0 1596 aa18.85■□□□□ 0.61
LSM2-209ENST00000470083 ADAMTS2O95450 1211 aa18.85■□□□□ 0.61
LSM2-209ENST00000470083 ADGRL2O95490 1459 aa18.84■□□□□ 0.61
LSM2-209ENST00000470083 DDX17Q92841 729 aaKnown RBP18.84■□□□□ 0.61
LSM2-209ENST00000470083 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
LSM2-209ENST00000470083 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.61
LSM2-209ENST00000470083 USP21Q9UK80 565 aa18.83■□□□□ 0.6
LSM2-209ENST00000470083 CCDC125Q86Z20 511 aa18.82■□□□□ 0.6
LSM2-209ENST00000470083 FNBP4Q8N3X1 1017 aaPredicted RBP18.8■□□□□ 0.6
LSM2-209ENST00000470083 ADGRL3Q9HAR2 1447 aa18.8■□□□□ 0.6
LSM2-209ENST00000470083 XRN1Q8IZH2 1706 aaKnown RBP18.8■□□□□ 0.6
LSM2-209ENST00000470083 ATRNO75882 1429 aa18.79■□□□□ 0.6
LSM2-209ENST00000470083 UNC13BO14795 1591 aa18.79■□□□□ 0.6
LSM2-209ENST00000470083 PTCH1Q13635 1447 aa18.77■□□□□ 0.6
LSM2-209ENST00000470083 SOS2Q07890 1332 aaPredicted RBP18.75■□□□□ 0.59
LSM2-209ENST00000470083 METP08581 1390 aa18.75■□□□□ 0.59
LSM2-209ENST00000470083 C1orf167Q5SNV9 1468 aa18.75■□□□□ 0.59
LSM2-209ENST00000470083 NRXN3Q9Y4C0 1643 aa18.73■□□□□ 0.59
LSM2-209ENST00000470083 LAMC1P11047 1609 aa18.72■□□□□ 0.59
LSM2-209ENST00000470083 APLP2Q06481 763 aa18.71■□□□□ 0.59
LSM2-209ENST00000470083 E9PCH4 1651 aa18.7■□□□□ 0.58
LSM2-209ENST00000470083 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
LSM2-209ENST00000470083 BLMP54132 1417 aaPredicted RBP18.68■□□□□ 0.58
LSM2-209ENST00000470083 MYOM2P54296 1465 aa18.67■□□□□ 0.58
LSM2-209ENST00000470083 NALCNQ8IZF0 1738 aa18.67■□□□□ 0.58
LSM2-209ENST00000470083 GJD4Q96KN9 370 aaPredicted RBP18.67■□□□□ 0.58
LSM2-209ENST00000470083 ORAI2Q96SN7 254 aa18.67■□□□□ 0.58
LSM2-209ENST00000470083 FAM50AQ14320 339 aaKnown RBP18.66■□□□□ 0.58
LSM2-209ENST00000470083 IQGAP3Q86VI3 1631 aa18.64■□□□□ 0.57
LSM2-209ENST00000470083 COL22A1Q8NFW1 1626 aaPredicted RBP18.64■□□□□ 0.57
LSM2-209ENST00000470083 ZNF326Q5BKZ1 582 aaKnown RBP18.63■□□□□ 0.57
LSM2-209ENST00000470083 LRP5O75197 1615 aa18.63■□□□□ 0.57
LSM2-209ENST00000470083 LOC105371045A0A1W2PR82 267 aa18.62■□□□□ 0.57
LSM2-209ENST00000470083 DEFB132Q7Z7B7 95 aa18.62■□□□□ 0.57
LSM2-209ENST00000470083 NUP155O75694 1391 aa18.61■□□□□ 0.57
LSM2-209ENST00000470083 ROBO2Q9HCK4 1378 aa18.59■□□□□ 0.57
LSM2-209ENST00000470083 NPHP3Q7Z494 1330 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms