RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ADGRF5Q8IZF2 1346 aa25.29■■□□□ 1.64
SMC4-211ENST00000469858 IDI1Q13907 227 aa25.29■■□□□ 1.64
SMC4-211ENST00000469858 SLC52A1Q9NWF4 448 aa25.29■■□□□ 1.64
SMC4-211ENST00000469858 MYO5BQ9ULV0 1848 aa25.28■■□□□ 1.64
SMC4-211ENST00000469858 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
SMC4-211ENST00000469858 IQGAP1P46940 1657 aa25.26■■□□□ 1.63
SMC4-211ENST00000469858 NRXN1Q9ULB1 1477 aa25.26■■□□□ 1.63
SMC4-211ENST00000469858 RPGRIP1LQ68CZ1 1315 aa25.24■■□□□ 1.63
SMC4-211ENST00000469858 SPATA31D1Q6ZQQ2 1576 aa25.24■■□□□ 1.63
SMC4-211ENST00000469858 TMEM131LA2VDJ0 1609 aa25.24■■□□□ 1.63
SMC4-211ENST00000469858 ANP32CO43423 234 aa25.23■■□□□ 1.63
SMC4-211ENST00000469858 POLR3GLQ9BT43 218 aa25.23■■□□□ 1.63
SMC4-211ENST00000469858 NEXMIFQ5QGS0 1516 aa25.22■■□□□ 1.63
SMC4-211ENST00000469858 CFAP70Q5T0N1 1121 aa25.21■■□□□ 1.63
SMC4-211ENST00000469858 ZMYM3Q14202 1370 aa25.2■■□□□ 1.62
SMC4-211ENST00000469858 PIK3C2GO75747 1445 aa25.19■■□□□ 1.62
SMC4-211ENST00000469858 SCAF11Q99590 1463 aaKnown RBP25.19■■□□□ 1.62
SMC4-211ENST00000469858 YTHDC1Q96MU7 727 aaKnown RBP25.18■■□□□ 1.62
SMC4-211ENST00000469858 NUTM2DQ5VT03 806 aaPredicted RBP25.16■■□□□ 1.62
SMC4-211ENST00000469858 TESK2Q96S53 571 aa25.14■■□□□ 1.61
SMC4-211ENST00000469858 VGFO15240 615 aaPredicted RBP25.13■■□□□ 1.61
SMC4-211ENST00000469858 SETBP1Q9Y6X0 1596 aa25.13■■□□□ 1.61
SMC4-211ENST00000469858 STAG3Q9UJ98 1225 aa25.13■■□□□ 1.61
SMC4-211ENST00000469858 EIF3AQ14152 1382 aaKnown RBP25.11■■□□□ 1.61
SMC4-211ENST00000469858 DISP3Q9P2K9 1392 aa25.1■■□□□ 1.61
SMC4-211ENST00000469858 FER1L4A9Z1Z3 1794 aa25.1■■□□□ 1.61
SMC4-211ENST00000469858 C14orf93Q9H972 538 aaKnown RBP25.09■■□□□ 1.61
SMC4-211ENST00000469858 ZFYVE9O95405 1425 aa25.09■■□□□ 1.61
SMC4-211ENST00000469858 TMF1P82094 1093 aa25.07■■□□□ 1.6
SMC4-211ENST00000469858 A2ML1A8K2U0 1454 aa25.07■■□□□ 1.6
SMC4-211ENST00000469858 ADGRB1O14514 1584 aa25.06■■□□□ 1.6
SMC4-211ENST00000469858 TNRQ92752 1358 aa25.05■■□□□ 1.6
SMC4-211ENST00000469858 CCER2I3L3R5 266 aa25.05■■□□□ 1.6
SMC4-211ENST00000469858 C3P01024 1663 aa25.03■■□□□ 1.6
SMC4-211ENST00000469858 MYO3AQ8NEV4 1616 aa25.02■■□□□ 1.6
SMC4-211ENST00000469858 TMEM132EQ6IEE7 984 aa25.02■■□□□ 1.6
SMC4-211ENST00000469858 SENP3Q9H4L4 574 aaPredicted RBP25.02■■□□□ 1.6
SMC4-211ENST00000469858 CENPBP07199 599 aaPredicted RBP25■■□□□ 1.59
SMC4-211ENST00000469858 CEBPAP49715 358 aaPredicted RBP24.99■■□□□ 1.59
SMC4-211ENST00000469858 RIMS2Q9UQ26 1411 aa24.99■■□□□ 1.59
SMC4-211ENST00000469858 PRKRIP1Q9H875 184 aaPredicted RBP24.98■■□□□ 1.59
SMC4-211ENST00000469858 TRAK1Q9UPV9 953 aa24.98■■□□□ 1.59
SMC4-211ENST00000469858 UBR1Q8IWV7 1749 aa24.97■■□□□ 1.59
SMC4-211ENST00000469858 KDM5AP29375 1690 aaKnown RBP24.96■■□□□ 1.59
SMC4-211ENST00000469858 QRICH2Q9H0J4 1663 aa24.95■■□□□ 1.59
SMC4-211ENST00000469858 ASXL1Q8IXJ9 1541 aa24.95■■□□□ 1.58
SMC4-211ENST00000469858 ARHGEF28Q8N1W1 1705 aaKnown RBP24.95■■□□□ 1.58
SMC4-211ENST00000469858 PLPPR3Q6T4P5 718 aa24.94■■□□□ 1.58
SMC4-211ENST00000469858 CENPJQ9HC77 1338 aaPredicted RBP24.94■■□□□ 1.58
SMC4-211ENST00000469858 ALKQ9UM73 1620 aa24.93■■□□□ 1.58
SMC4-211ENST00000469858 CDCA8Q53HL2 280 aa24.93■■□□□ 1.58
SMC4-211ENST00000469858 CNGB1Q14028 1251 aaPredicted RBP24.92■■□□□ 1.58
SMC4-211ENST00000469858 NLRP1Q9C000 1473 aa24.91■■□□□ 1.58
SMC4-211ENST00000469858 SBNO2Q9Y2G9 1366 aa24.91■■□□□ 1.58
SMC4-211ENST00000469858 SLC24A1O60721 1099 aa24.9■■□□□ 1.58
SMC4-211ENST00000469858 RIMS1Q86UR5 1692 aaKnown RBP24.89■■□□□ 1.57
SMC4-211ENST00000469858 MYOM1P52179 1685 aa24.88■■□□□ 1.57
SMC4-211ENST00000469858 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.87■■□□□ 1.57
SMC4-211ENST00000469858 SETD1AO15047 1707 aaKnown RBP24.86■■□□□ 1.57
SMC4-211ENST00000469858 PANK3Q9H999 370 aa24.85■■□□□ 1.57
SMC4-211ENST00000469858 STK26Q9P289 416 aa24.85■■□□□ 1.57
SMC4-211ENST00000469858 NRXN3Q9Y4C0 1643 aa24.85■■□□□ 1.57
SMC4-211ENST00000469858 TMEM2Q9UHN6 1383 aa24.85■■□□□ 1.57
SMC4-211ENST00000469858 YTHDC2Q9H6S0 1430 aaKnown RBP24.84■■□□□ 1.57
SMC4-211ENST00000469858 PTPRMP28827 1452 aa24.83■■□□□ 1.57
SMC4-211ENST00000469858 HDGFP51858 240 aaKnown RBP24.83■■□□□ 1.57
SMC4-211ENST00000469858 ADAMTSL3P82987 1691 aa24.82■■□□□ 1.56
SMC4-211ENST00000469858 PER1O15534 1290 aaPredicted RBP24.82■■□□□ 1.56
SMC4-211ENST00000469858 CCDC184Q52MB2 194 aa24.82■■□□□ 1.56
SMC4-211ENST00000469858 MRS2Q9HD23 443 aa24.78■■□□□ 1.56
SMC4-211ENST00000469858 SAFB2Q14151 953 aaKnown RBP eCLIP24.78■■□□□ 1.56
SMC4-211ENST00000469858 KTN1Q86UP2 1357 aaKnown RBP24.76■■□□□ 1.56
SMC4-211ENST00000469858 TULP4Q9NRJ4 1543 aa24.75■■□□□ 1.55
SMC4-211ENST00000469858 BCANQ96GW7 911 aa24.75■■□□□ 1.55
SMC4-211ENST00000469858 RALBP1Q15311 655 aa24.74■■□□□ 1.55
SMC4-211ENST00000469858 PRAM1Q96QH2 718 aa24.74■■□□□ 1.55
SMC4-211ENST00000469858 LRPPRCP42704 1394 aaKnown RBP24.73■■□□□ 1.55
SMC4-211ENST00000469858 SLIT1O75093 1534 aa24.73■■□□□ 1.55
SMC4-211ENST00000469858 POGKQ9P215 609 aa24.73■■□□□ 1.55
SMC4-211ENST00000469858 EVC2Q86UK5 1308 aa24.72■■□□□ 1.55
SMC4-211ENST00000469858 LTKP29376 864 aa24.72■■□□□ 1.55
SMC4-211ENST00000469858 METP08581 1390 aa24.72■■□□□ 1.55
SMC4-211ENST00000469858 PARD3Q8TEW0 1356 aa24.72■■□□□ 1.55
SMC4-211ENST00000469858 DLC1Q96QB1 1528 aa24.71■■□□□ 1.55
SMC4-211ENST00000469858 CC2D1BQ5T0F9 858 aaKnown RBP24.71■■□□□ 1.55
SMC4-211ENST00000469858 ARHGAP23Q9P227 1491 aa24.71■■□□□ 1.55
SMC4-211ENST00000469858 CEP170BQ9Y4F5 1589 aaPredicted RBP24.71■■□□□ 1.55
SMC4-211ENST00000469858 TXNDC2Q86VQ3 553 aa24.71■■□□□ 1.55
SMC4-211ENST00000469858 KNSTRNQ9Y448 316 aa24.71■■□□□ 1.55
SMC4-211ENST00000469858 MYBBP1AQ9BQG0 1328 aaKnown RBP24.7■■□□□ 1.54
SMC4-211ENST00000469858 PLEKHG1Q9ULL1 1385 aa24.7■■□□□ 1.54
SMC4-211ENST00000469858 EID1Q9Y6B2 187 aa24.69■■□□□ 1.54
SMC4-211ENST00000469858 THEMISQ8N1K5 641 aaPredicted RBP24.69■■□□□ 1.54
SMC4-211ENST00000469858 MINK1Q8N4C8 1332 aaPredicted RBP24.68■■□□□ 1.54
SMC4-211ENST00000469858 KNDC1Q76NI1 1749 aa24.67■■□□□ 1.54
SMC4-211ENST00000469858 ADAMTS13Q76LX8 1427 aa24.67■■□□□ 1.54
SMC4-211ENST00000469858 ABCC11Q96J66 1382 aa24.67■■□□□ 1.54
SMC4-211ENST00000469858 FAM9BQ8IZU0 186 aa24.66■■□□□ 1.54
SMC4-211ENST00000469858 TMC1Q8TDI8 760 aa24.66■■□□□ 1.54
SMC4-211ENST00000469858 PUS7Q96PZ0 661 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 1016.7 ms