RNA–Protein interactions for RNA: ENST00000468479.5

FDPS-207, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 938 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-207ENST00000468479 HDGFP51858 240 aaKnown RBP19.29■□□□□ 0.68
FDPS-207ENST00000468479 NUP155O75694 1391 aa19.29■□□□□ 0.68
FDPS-207ENST00000468479 UBR1Q8IWV7 1749 aa19.28■□□□□ 0.68
FDPS-207ENST00000468479 UNC13BO14795 1591 aa19.28■□□□□ 0.68
FDPS-207ENST00000468479 IQGAP1P46940 1657 aa19.28■□□□□ 0.68
FDPS-207ENST00000468479 STRCP1A6NGW2 1772 aa19.28■□□□□ 0.68
FDPS-207ENST00000468479 SYNMO15061 1565 aa19.27■□□□□ 0.67
FDPS-207ENST00000468479 TET3O43151 1660 aa19.27■□□□□ 0.67
FDPS-207ENST00000468479 LTKP29376 864 aa19.26■□□□□ 0.67
FDPS-207ENST00000468479 KDM5AP29375 1690 aaKnown RBP19.25■□□□□ 0.67
FDPS-207ENST00000468479 ZNF316A6NFI3 1004 aaPredicted RBP19.25■□□□□ 0.67
FDPS-207ENST00000468479 PIK3C2BO00750 1634 aa19.25■□□□□ 0.67
FDPS-207ENST00000468479 SENP3Q9H4L4 574 aaPredicted RBP19.24■□□□□ 0.67
FDPS-207ENST00000468479 ADGRB3O60242 1522 aa19.24■□□□□ 0.67
FDPS-207ENST00000468479 CFAP65Q6ZU64 1925 aaKnown RBP19.22■□□□□ 0.67
FDPS-207ENST00000468479 SIN3AQ96ST3 1273 aa19.22■□□□□ 0.67
FDPS-207ENST00000468479 PPP1R15AO75807 674 aaPredicted RBP19.21■□□□□ 0.67
FDPS-207ENST00000468479 SLC4A1APQ9BWU0 796 aaKnown RBP19.21■□□□□ 0.67
FDPS-207ENST00000468479 IQGAP3Q86VI3 1631 aa19.21■□□□□ 0.67
FDPS-207ENST00000468479 NEUROD1Q13562 356 aa19.2■□□□□ 0.66
FDPS-207ENST00000468479 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.2■□□□□ 0.66
FDPS-207ENST00000468479 BCANQ96GW7 911 aa19.2■□□□□ 0.66
FDPS-207ENST00000468479 CHGAP10645 457 aaKnown RBP19.19■□□□□ 0.66
FDPS-207ENST00000468479 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
FDPS-207ENST00000468479 ANKRD30BQ9BXX2 1392 aa19.18■□□□□ 0.66
FDPS-207ENST00000468479 LRRC7Q96NW7 1537 aa19.15■□□□□ 0.66
FDPS-207ENST00000468479 XIRP1Q702N8 1843 aaKnown RBP19.15■□□□□ 0.66
FDPS-207ENST00000468479 RIMS2Q9UQ26 1411 aa19.14■□□□□ 0.65
FDPS-207ENST00000468479 KCNA6P17658 529 aa19.13■□□□□ 0.65
FDPS-207ENST00000468479 SLC26A8Q96RN1 970 aa19.13■□□□□ 0.65
FDPS-207ENST00000468479 PLEKHG1Q9ULL1 1385 aa19.13■□□□□ 0.65
FDPS-207ENST00000468479 SETD1AO15047 1707 aaKnown RBP19.11■□□□□ 0.65
FDPS-207ENST00000468479 E9PCH4 1651 aa19.11■□□□□ 0.65
FDPS-207ENST00000468479 ZFYVE9O95405 1425 aa19.11■□□□□ 0.65
FDPS-207ENST00000468479 TMEM131LA2VDJ0 1609 aa19.08■□□□□ 0.65
FDPS-207ENST00000468479 TBX22Q9Y458 520 aa19.07■□□□□ 0.64
FDPS-207ENST00000468479 NKTRP30414 1462 aaKnown RBP19.06■□□□□ 0.64
FDPS-207ENST00000468479 ZNF326Q5BKZ1 582 aaKnown RBP19.06■□□□□ 0.64
FDPS-207ENST00000468479 PROSER2Q86WR7 435 aaPredicted RBP19.06■□□□□ 0.64
FDPS-207ENST00000468479 RGS17Q9UGC6 210 aaPredicted RBP19.05■□□□□ 0.64
FDPS-207ENST00000468479 TMEM94Q12767 1356 aa19.05■□□□□ 0.64
FDPS-207ENST00000468479 DIEXFQ68CQ4 756 aaKnown RBP19.04■□□□□ 0.64
FDPS-207ENST00000468479 FOXD1Q16676 465 aa19.02■□□□□ 0.64
FDPS-207ENST00000468479 PIK3R4Q99570 1358 aa19.02■□□□□ 0.64
FDPS-207ENST00000468479 TRPM2O94759 1503 aa19.01■□□□□ 0.63
FDPS-207ENST00000468479 DIP2AQ14689 1571 aa19.01■□□□□ 0.63
FDPS-207ENST00000468479 NUTM2DQ5VT03 806 aaPredicted RBP19■□□□□ 0.63
FDPS-207ENST00000468479 ROBO1Q9Y6N7 1651 aa19■□□□□ 0.63
FDPS-207ENST00000468479 SPHKAPQ2M3C7 1700 aa19■□□□□ 0.63
FDPS-207ENST00000468479 NWD1Q149M9 1564 aa18.99■□□□□ 0.63
FDPS-207ENST00000468479 MSH6P52701 1360 aa18.99■□□□□ 0.63
FDPS-207ENST00000468479 L3MBTL2Q969R5 705 aa18.97■□□□□ 0.63
FDPS-207ENST00000468479 NCOA3Q9Y6Q9 1424 aa18.97■□□□□ 0.63
FDPS-207ENST00000468479 C14orf37Q86TY3 774 aa18.96■□□□□ 0.63
FDPS-207ENST00000468479 ADAMTS13Q76LX8 1427 aa18.96■□□□□ 0.63
FDPS-207ENST00000468479 RPGRIP1LQ68CZ1 1315 aa18.95■□□□□ 0.62
FDPS-207ENST00000468479 VGFO15240 615 aaPredicted RBP18.94■□□□□ 0.62
FDPS-207ENST00000468479 POTEAQ6S8J7 498 aa18.94■□□□□ 0.62
FDPS-207ENST00000468479 FAM135BQ49AJ0 1406 aa18.93■□□□□ 0.62
FDPS-207ENST00000468479 MYO5BQ9ULV0 1848 aa18.93■□□□□ 0.62
FDPS-207ENST00000468479 PHLPP1O60346 1717 aa18.92■□□□□ 0.62
FDPS-207ENST00000468479 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
FDPS-207ENST00000468479 AMOTL2Q9Y2J4 779 aa18.91■□□□□ 0.62
FDPS-207ENST00000468479 CLTCL1P53675 1640 aa18.91■□□□□ 0.62
FDPS-207ENST00000468479 CCDC144AA2RUR9 1427 aa18.91■□□□□ 0.62
FDPS-207ENST00000468479 SETBP1Q9Y6X0 1596 aa18.9■□□□□ 0.62
FDPS-207ENST00000468479 ATF3P18847 181 aa18.89■□□□□ 0.61
FDPS-207ENST00000468479 CADPS2Q86UW7 1296 aa18.89■□□□□ 0.61
FDPS-207ENST00000468479 C19orf44Q9H6X5 657 aa18.89■□□□□ 0.61
FDPS-207ENST00000468479 SLAIN2Q9P270 581 aa18.89■□□□□ 0.61
FDPS-207ENST00000468479 CHD2O14647 1828 aaKnown RBP18.86■□□□□ 0.61
FDPS-207ENST00000468479 NEXMIFQ5QGS0 1516 aa18.86■□□□□ 0.61
FDPS-207ENST00000468479 KIF1BO60333 1816 aa18.84■□□□□ 0.61
FDPS-207ENST00000468479 METP08581 1390 aa18.82■□□□□ 0.6
FDPS-207ENST00000468479 DCCP43146 1447 aa18.82■□□□□ 0.6
FDPS-207ENST00000468479 PTPRUQ92729 1446 aa18.82■□□□□ 0.6
FDPS-207ENST00000468479 EIF4G2P78344 907 aaKnown RBP eCLIP18.81■□□□□ 0.6
FDPS-207ENST00000468479 STAC3Q96MF2 364 aa18.81■□□□□ 0.6
FDPS-207ENST00000468479 COL16A1Q07092 1604 aaPredicted RBP18.79■□□□□ 0.6
FDPS-207ENST00000468479 NRXN3Q9Y4C0 1643 aa18.79■□□□□ 0.6
FDPS-207ENST00000468479 NBPF8Q3BBV2 869 aa18.78■□□□□ 0.6
FDPS-207ENST00000468479 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
FDPS-207ENST00000468479 PTCH1Q13635 1447 aa18.76■□□□□ 0.59
FDPS-207ENST00000468479 XRN1Q8IZH2 1706 aaKnown RBP18.76■□□□□ 0.59
FDPS-207ENST00000468479 JCADQ9P266 1359 aa18.76■□□□□ 0.59
FDPS-207ENST00000468479 SPATA31E1Q6ZUB1 1445 aa18.75■□□□□ 0.59
FDPS-207ENST00000468479 RALGAPBQ86X10 1494 aa18.75■□□□□ 0.59
FDPS-207ENST00000468479 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
FDPS-207ENST00000468479 SHPRHQ149N8 1683 aa18.73■□□□□ 0.59
FDPS-207ENST00000468479 HSPA5P11021 654 aaKnown RBP18.73■□□□□ 0.59
FDPS-207ENST00000468479 PRAG1Q86YV5 1406 aa18.73■□□□□ 0.59
FDPS-207ENST00000468479 LRP6O75581 1613 aa18.72■□□□□ 0.59
FDPS-207ENST00000468479 DCAF11Q8TEB1 546 aa18.72■□□□□ 0.59
FDPS-207ENST00000468479 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.71■□□□□ 0.59
FDPS-207ENST00000468479 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.59
FDPS-207ENST00000468479 BRINP3Q76B58 766 aa18.69■□□□□ 0.58
FDPS-207ENST00000468479 UPF1Q92900 1129 aaKnown RBP eCLIP18.69■□□□□ 0.58
FDPS-207ENST00000468479 ROBO2Q9HCK4 1378 aa18.68■□□□□ 0.58
FDPS-207ENST00000468479 PPLO60437 1756 aa18.68■□□□□ 0.58
FDPS-207ENST00000468479 MST1RQ04912 1400 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms