RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 NPC1L1Q9UHC9 1359 aa8.24□□□□□ -1.09
PSMD6-204ENST00000467853 ARHGAP5Q13017 1502 aa8.23□□□□□ -1.09
PSMD6-204ENST00000467853 KDM2BQ8NHM5 1336 aa8.23□□□□□ -1.09
PSMD6-204ENST00000467853 PLIN1O60240 522 aa8.23□□□□□ -1.09
PSMD6-204ENST00000467853 PIK3C2GO75747 1445 aa8.23□□□□□ -1.09
PSMD6-204ENST00000467853 AAMPQ13685 434 aa8.23□□□□□ -1.09
PSMD6-204ENST00000467853 PPP2R1AP30153 589 aa8.22□□□□□ -1.09
PSMD6-204ENST00000467853 ADAMTS8Q9UP79 889 aa8.22□□□□□ -1.09
PSMD6-204ENST00000467853 DNAJC5BQ9UF47 199 aa8.22□□□□□ -1.09
PSMD6-204ENST00000467853 SCAPERQ9BY12 1400 aa8.22□□□□□ -1.09
PSMD6-204ENST00000467853 MYO5CQ9NQX4 1742 aa8.22□□□□□ -1.09
PSMD6-204ENST00000467853 RNF17Q9BXT8 1623 aaKnown RBP8.22□□□□□ -1.09
PSMD6-204ENST00000467853 CDC42BPBQ9Y5S2 1711 aa8.22□□□□□ -1.09
PSMD6-204ENST00000467853 SYNMO15061 1565 aa8.22□□□□□ -1.09
PSMD6-204ENST00000467853 BECN1Q14457 450 aa8.22□□□□□ -1.09
PSMD6-204ENST00000467853 DUSP27Q5VZP5 1158 aa8.21□□□□□ -1.09
PSMD6-204ENST00000467853 ASXL1Q8IXJ9 1541 aa8.21□□□□□ -1.09
PSMD6-204ENST00000467853 SYCP2Q9BX26 1530 aa8.21□□□□□ -1.09
PSMD6-204ENST00000467853 E9PSI1 815 aa8.21□□□□□ -1.1
PSMD6-204ENST00000467853 NFKBIBQ15653 356 aa8.21□□□□□ -1.1
PSMD6-204ENST00000467853 PLA2R1Q13018 1463 aa8.21□□□□□ -1.1
PSMD6-204ENST00000467853 CGNL1Q0VF96 1302 aa8.21□□□□□ -1.1
PSMD6-204ENST00000467853 MAGI2Q86UL8 1455 aa8.21□□□□□ -1.1
PSMD6-204ENST00000467853 MAPK8IP3Q9UPT6 1336 aa8.2□□□□□ -1.1
PSMD6-204ENST00000467853 SCAF11Q99590 1463 aaKnown RBP8.2□□□□□ -1.1
PSMD6-204ENST00000467853 SLFN5Q08AF3 891 aa8.2□□□□□ -1.1
PSMD6-204ENST00000467853 ABCC2Q92887 1545 aa8.2□□□□□ -1.1
PSMD6-204ENST00000467853 NKTRP30414 1462 aaKnown RBP8.19□□□□□ -1.1
PSMD6-204ENST00000467853 ZNF521Q96K83 1311 aa8.19□□□□□ -1.1
PSMD6-204ENST00000467853 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
PSMD6-204ENST00000467853 UPF2Q9HAU5 1272 aaKnown RBP8.19□□□□□ -1.1
PSMD6-204ENST00000467853 EFCAB2Q5VUJ9 269 aa8.19□□□□□ -1.1
PSMD6-204ENST00000467853 WDR7Q9Y4E6 1490 aa8.18□□□□□ -1.1
PSMD6-204ENST00000467853 CANXP27824 592 aaKnown RBP8.18□□□□□ -1.1
PSMD6-204ENST00000467853 IQGAP1P46940 1657 aa8.18□□□□□ -1.1
PSMD6-204ENST00000467853 AMER1Q5JTC6 1135 aaPredicted RBP8.18□□□□□ -1.1
PSMD6-204ENST00000467853 KANK1Q14678 1352 aa8.18□□□□□ -1.1
PSMD6-204ENST00000467853 PLEKHH1Q9ULM0 1364 aa8.17□□□□□ -1.1
PSMD6-204ENST00000467853 C8orf34Q49A92 452 aa8.17□□□□□ -1.1
PSMD6-204ENST00000467853 TRMT2AQ8IZ69 625 aaKnown RBP8.17□□□□□ -1.1
PSMD6-204ENST00000467853 ZMYM3Q14202 1370 aa8.17□□□□□ -1.1
PSMD6-204ENST00000467853 C20orf194Q5TEA3 1177 aa8.17□□□□□ -1.1
PSMD6-204ENST00000467853 PMFBP1Q8TBY8 1022 aa8.17□□□□□ -1.1
PSMD6-204ENST00000467853 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
PSMD6-204ENST00000467853 CAPN15O75808 1086 aa8.16□□□□□ -1.1
PSMD6-204ENST00000467853 RGS3P49796 1198 aa8.16□□□□□ -1.1
PSMD6-204ENST00000467853 IL27Q8NEV9 243 aa8.16□□□□□ -1.1
PSMD6-204ENST00000467853 KDM5AP29375 1690 aaKnown RBP8.16□□□□□ -1.1
PSMD6-204ENST00000467853 TRPM2O94759 1503 aa8.16□□□□□ -1.1
PSMD6-204ENST00000467853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.16□□□□□ -1.1
PSMD6-204ENST00000467853 KIAA1210Q9ULL0 1709 aa8.16□□□□□ -1.1
PSMD6-204ENST00000467853 L1TD1Q5T7N2 865 aaKnown RBP8.15□□□□□ -1.1
PSMD6-204ENST00000467853 RTEL1-TNFRSF6BF6WH68 1400 aa8.15□□□□□ -1.1
PSMD6-204ENST00000467853 TTC37Q6PGP7 1564 aa8.15□□□□□ -1.1
PSMD6-204ENST00000467853 CENPJQ9HC77 1338 aaPredicted RBP8.15□□□□□ -1.1
PSMD6-204ENST00000467853 SPHKAPQ2M3C7 1700 aa8.15□□□□□ -1.1
PSMD6-204ENST00000467853 NEURL4Q96JN8 1562 aa8.15□□□□□ -1.11
PSMD6-204ENST00000467853 PLCH2O75038 1416 aa8.14□□□□□ -1.11
PSMD6-204ENST00000467853 FRAT1Q92837 279 aaPredicted RBP8.14□□□□□ -1.11
PSMD6-204ENST00000467853 CEP152O94986 1710 aa8.14□□□□□ -1.11
PSMD6-204ENST00000467853 SHROOM2Q13796 1616 aa8.14□□□□□ -1.11
PSMD6-204ENST00000467853 APAF1O14727 1248 aa8.13□□□□□ -1.11
PSMD6-204ENST00000467853 CLUAP1Q96AJ1 413 aa8.13□□□□□ -1.11
PSMD6-204ENST00000467853 SPAG9O60271 1321 aaKnown RBP8.13□□□□□ -1.11
PSMD6-204ENST00000467853 PTPRTO14522 1441 aa8.13□□□□□ -1.11
PSMD6-204ENST00000467853 POLR3AO14802 1390 aaPredicted RBP8.12□□□□□ -1.11
PSMD6-204ENST00000467853 FAM43AQ8N2R8 423 aa8.12□□□□□ -1.11
PSMD6-204ENST00000467853 SLC4A3P48751 1232 aa8.12□□□□□ -1.11
PSMD6-204ENST00000467853 CFAP53Q96M91 514 aa8.12□□□□□ -1.11
PSMD6-204ENST00000467853 RTN4Q9NQC3 1192 aaKnown RBP8.12□□□□□ -1.11
PSMD6-204ENST00000467853 RWDD1Q9H446 243 aaPredicted RBP8.12□□□□□ -1.11
PSMD6-204ENST00000467853 VIRMAQ69YN4 1812 aaKnown RBP8.12□□□□□ -1.11
PSMD6-204ENST00000467853 CCDC146Q8IYE0 955 aa8.11□□□□□ -1.11
PSMD6-204ENST00000467853 TET3O43151 1660 aa8.11□□□□□ -1.11
PSMD6-204ENST00000467853 ABCC1P33527 1531 aa8.11□□□□□ -1.11
PSMD6-204ENST00000467853 ARAP3Q8WWN8 1544 aa8.11□□□□□ -1.11
PSMD6-204ENST00000467853 RSPH6AQ9H0K4 717 aa8.11□□□□□ -1.11
PSMD6-204ENST00000467853 MYOM2P54296 1465 aa8.11□□□□□ -1.11
PSMD6-204ENST00000467853 WDR63Q8IWG1 891 aa8.1□□□□□ -1.11
PSMD6-204ENST00000467853 FOXD4L1Q9NU39 408 aa8.1□□□□□ -1.11
PSMD6-204ENST00000467853 RUNDC1Q96C34 613 aa8.1□□□□□ -1.11
PSMD6-204ENST00000467853 SBNO2Q9Y2G9 1366 aa8.1□□□□□ -1.11
PSMD6-204ENST00000467853 FRAT2O75474 233 aaPredicted RBP8.1□□□□□ -1.11
PSMD6-204ENST00000467853 MYH16Q9H6N6 1097 aa8.1□□□□□ -1.11
PSMD6-204ENST00000467853 SKAP1Q86WV1 359 aa8.09□□□□□ -1.11
PSMD6-204ENST00000467853 BRPF3Q9ULD4 1205 aa8.09□□□□□ -1.11
PSMD6-204ENST00000467853 MYOM1P52179 1685 aa8.09□□□□□ -1.11
PSMD6-204ENST00000467853 BCAR3O75815 825 aa8.09□□□□□ -1.11
PSMD6-204ENST00000467853 CT47B1P0C2W7 299 aaPredicted RBP8.09□□□□□ -1.11
PSMD6-204ENST00000467853 MORC1Q86VD1 984 aa8.09□□□□□ -1.11
PSMD6-204ENST00000467853 ANO8Q9HCE9 1232 aaPredicted RBP8.09□□□□□ -1.11
PSMD6-204ENST00000467853 UHRF1BP1LA0JNW5 1464 aa8.08□□□□□ -1.12
PSMD6-204ENST00000467853 WWC1Q8IX03 1113 aa8.08□□□□□ -1.12
PSMD6-204ENST00000467853 CLTCL1P53675 1640 aa8.08□□□□□ -1.12
PSMD6-204ENST00000467853 DEPDC5O75140 1603 aa8.08□□□□□ -1.12
PSMD6-204ENST00000467853 CCDC27Q2M243 656 aa8.08□□□□□ -1.12
PSMD6-204ENST00000467853 COG6Q9Y2V7 657 aa8.07□□□□□ -1.12
PSMD6-204ENST00000467853 MAP3K4Q9Y6R4 1608 aa8.07□□□□□ -1.12
PSMD6-204ENST00000467853 IGHDP01880 384 aa8.07□□□□□ -1.12
PSMD6-204ENST00000467853 ERVK-7P63135 1459 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms