RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 TMEM2Q9UHN6 1383 aa21.27■■□□□ 1
DDX56-208ENST00000467318 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.24■□□□□ 0.99
DDX56-208ENST00000467318 L3MBTL2Q969R5 705 aa21.24■□□□□ 0.99
DDX56-208ENST00000467318 SLIT1O75093 1534 aa21.24■□□□□ 0.99
DDX56-208ENST00000467318 EID1Q9Y6B2 187 aa21.23■□□□□ 0.99
DDX56-208ENST00000467318 ARHGAP23Q9P227 1491 aa21.23■□□□□ 0.99
DDX56-208ENST00000467318 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
DDX56-208ENST00000467318 DCAF11Q8TEB1 546 aa21.22■□□□□ 0.99
DDX56-208ENST00000467318 RIMS2Q9UQ26 1411 aa21.22■□□□□ 0.99
DDX56-208ENST00000467318 ZFYVE9O95405 1425 aa21.22■□□□□ 0.99
DDX56-208ENST00000467318 NUTM2DQ5VT03 806 aaPredicted RBP21.21■□□□□ 0.99
DDX56-208ENST00000467318 ANKLE2Q86XL3 938 aa21.21■□□□□ 0.99
DDX56-208ENST00000467318 TXNDC2Q86VQ3 553 aa21.2■□□□□ 0.98
DDX56-208ENST00000467318 NEXMIFQ5QGS0 1516 aa21.2■□□□□ 0.98
DDX56-208ENST00000467318 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
DDX56-208ENST00000467318 PPP1R15AO75807 674 aaPredicted RBP21.18■□□□□ 0.98
DDX56-208ENST00000467318 PPLO60437 1756 aa21.17■□□□□ 0.98
DDX56-208ENST00000467318 LTKP29376 864 aa21.17■□□□□ 0.98
DDX56-208ENST00000467318 KDM2AQ9Y2K7 1162 aa21.17■□□□□ 0.98
DDX56-208ENST00000467318 MYOM2P54296 1465 aa21.16■□□□□ 0.98
DDX56-208ENST00000467318 IFT172Q9UG01 1749 aa21.16■□□□□ 0.98
DDX56-208ENST00000467318 SCAF11Q99590 1463 aaKnown RBP21.15■□□□□ 0.98
DDX56-208ENST00000467318 ADGRF5Q8IZF2 1346 aa21.12■□□□□ 0.97
DDX56-208ENST00000467318 NCKAP5LQ9HCH0 1330 aa21.12■□□□□ 0.97
DDX56-208ENST00000467318 PLEKHG1Q9ULL1 1385 aa21.11■□□□□ 0.97
DDX56-208ENST00000467318 NRXN1Q9ULB1 1477 aa21.11■□□□□ 0.97
DDX56-208ENST00000467318 MED14O60244 1454 aa21.09■□□□□ 0.97
DDX56-208ENST00000467318 PIK3C2GO75747 1445 aa21.09■□□□□ 0.97
DDX56-208ENST00000467318 PRAG1Q86YV5 1406 aa21.08■□□□□ 0.96
DDX56-208ENST00000467318 STRCQ7RTU9 1775 aa21.08■□□□□ 0.96
DDX56-208ENST00000467318 POLR1AO95602 1720 aaPredicted RBP21.08■□□□□ 0.96
DDX56-208ENST00000467318 BCANQ96GW7 911 aa21.07■□□□□ 0.96
DDX56-208ENST00000467318 NPHP4O75161 1426 aaPredicted RBP21.06■□□□□ 0.96
DDX56-208ENST00000467318 SETBP1Q9Y6X0 1596 aa21.06■□□□□ 0.96
DDX56-208ENST00000467318 C14orf93Q9H972 538 aaKnown RBP21.05■□□□□ 0.96
DDX56-208ENST00000467318 DMRT2Q9Y5R5 561 aa21.04■□□□□ 0.96
DDX56-208ENST00000467318 NBPF8Q3BBV2 869 aa21.03■□□□□ 0.96
DDX56-208ENST00000467318 TBX22Q9Y458 520 aa21.02■□□□□ 0.96
DDX56-208ENST00000467318 ADAMTS13Q76LX8 1427 aa21.01■□□□□ 0.95
DDX56-208ENST00000467318 IQGAP1P46940 1657 aa21.01■□□□□ 0.95
DDX56-208ENST00000467318 CFAP70Q5T0N1 1121 aa21.01■□□□□ 0.95
DDX56-208ENST00000467318 SLC26A8Q96RN1 970 aa21■□□□□ 0.95
DDX56-208ENST00000467318 ALKQ9UM73 1620 aa21■□□□□ 0.95
DDX56-208ENST00000467318 LAMC1P11047 1609 aa20.99■□□□□ 0.95
DDX56-208ENST00000467318 NRXN3Q9Y4C0 1643 aa20.99■□□□□ 0.95
DDX56-208ENST00000467318 DIP2AQ14689 1571 aa20.99■□□□□ 0.95
DDX56-208ENST00000467318 KIAA1210Q9ULL0 1709 aa20.99■□□□□ 0.95
DDX56-208ENST00000467318 PIK3R4Q99570 1358 aa20.96■□□□□ 0.95
DDX56-208ENST00000467318 TRPM1Q7Z4N2 1603 aa20.95■□□□□ 0.94
DDX56-208ENST00000467318 RALGAPBQ86X10 1494 aa20.95■□□□□ 0.94
DDX56-208ENST00000467318 ROCK2O75116 1388 aaKnown RBP20.95■□□□□ 0.94
DDX56-208ENST00000467318 NBPF1Q3BBV0 1214 aa20.94■□□□□ 0.94
DDX56-208ENST00000467318 SETD1AO15047 1707 aaKnown RBP20.93■□□□□ 0.94
DDX56-208ENST00000467318 METP08581 1390 aa20.93■□□□□ 0.94
DDX56-208ENST00000467318 TMEM132EQ6IEE7 984 aa20.93■□□□□ 0.94
DDX56-208ENST00000467318 GPRASP1Q5JY77 1395 aa20.92■□□□□ 0.94
DDX56-208ENST00000467318 ADGRB1O14514 1584 aa20.91■□□□□ 0.94
DDX56-208ENST00000467318 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
DDX56-208ENST00000467318 YTHDC2Q9H6S0 1430 aaKnown RBP20.88■□□□□ 0.93
DDX56-208ENST00000467318 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
DDX56-208ENST00000467318 KCNA6P17658 529 aa20.87■□□□□ 0.93
DDX56-208ENST00000467318 LRPPRCP42704 1394 aaKnown RBP20.87■□□□□ 0.93
DDX56-208ENST00000467318 ABCC11Q96J66 1382 aa20.87■□□□□ 0.93
DDX56-208ENST00000467318 AMOTL2Q9Y2J4 779 aa20.86■□□□□ 0.93
DDX56-208ENST00000467318 PTPRUQ92729 1446 aa20.85■□□□□ 0.93
DDX56-208ENST00000467318 STK26Q9P289 416 aa20.84■□□□□ 0.93
DDX56-208ENST00000467318 CHD2O14647 1828 aaKnown RBP20.84■□□□□ 0.93
DDX56-208ENST00000467318 TECPR2O15040 1411 aa20.83■□□□□ 0.93
DDX56-208ENST00000467318 SIRT1Q96EB6 747 aa20.83■□□□□ 0.93
DDX56-208ENST00000467318 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.93
DDX56-208ENST00000467318 ZNF335Q9H4Z2 1342 aaPredicted RBP20.83■□□□□ 0.93
DDX56-208ENST00000467318 STRCP1A6NGW2 1772 aa20.81■□□□□ 0.92
DDX56-208ENST00000467318 EIF3AQ14152 1382 aaKnown RBP20.81■□□□□ 0.92
DDX56-208ENST00000467318 NWD1Q149M9 1564 aa20.8■□□□□ 0.92
DDX56-208ENST00000467318 DLC1Q96QB1 1528 aa20.8■□□□□ 0.92
DDX56-208ENST00000467318 XRN1Q8IZH2 1706 aaKnown RBP20.79■□□□□ 0.92
DDX56-208ENST00000467318 PTCH1Q13635 1447 aa20.79■□□□□ 0.92
DDX56-208ENST00000467318 FAM135BQ49AJ0 1406 aa20.79■□□□□ 0.92
DDX56-208ENST00000467318 NKTRP30414 1462 aaKnown RBP20.79■□□□□ 0.92
DDX56-208ENST00000467318 KNDC1Q76NI1 1749 aa20.78■□□□□ 0.92
DDX56-208ENST00000467318 EIF4G2P78344 907 aaKnown RBP eCLIP20.78■□□□□ 0.92
DDX56-208ENST00000467318 USP47Q96K76 1375 aa20.78■□□□□ 0.92
DDX56-208ENST00000467318 RBM33Q96EV2 1170 aaKnown RBP20.77■□□□□ 0.92
DDX56-208ENST00000467318 CPS1P31327 1500 aa20.77■□□□□ 0.92
DDX56-208ENST00000467318 ROBO2Q9HCK4 1378 aa20.77■□□□□ 0.91
DDX56-208ENST00000467318 PRAM1Q96QH2 718 aa20.76■□□□□ 0.91
DDX56-208ENST00000467318 POGKQ9P215 609 aa20.76■□□□□ 0.91
DDX56-208ENST00000467318 PROSER2Q86WR7 435 aaPredicted RBP20.74■□□□□ 0.91
DDX56-208ENST00000467318 CENPJQ9HC77 1338 aaPredicted RBP20.74■□□□□ 0.91
DDX56-208ENST00000467318 WAPLQ7Z5K2 1190 aa20.73■□□□□ 0.91
DDX56-208ENST00000467318 ARHGEF28Q8N1W1 1705 aaKnown RBP20.73■□□□□ 0.91
DDX56-208ENST00000467318 ST20-MTHFSA0A0A6YYL1 179 aa20.73■□□□□ 0.91
DDX56-208ENST00000467318 SLC24A1O60721 1099 aa20.73■□□□□ 0.91
DDX56-208ENST00000467318 NCOA3Q9Y6Q9 1424 aa20.71■□□□□ 0.91
DDX56-208ENST00000467318 PLEKHH1Q9ULM0 1364 aa20.7■□□□□ 0.9
DDX56-208ENST00000467318 HSPA5P11021 654 aaKnown RBP20.7■□□□□ 0.9
DDX56-208ENST00000467318 LTBP4Q8N2S1 1624 aa20.69■□□□□ 0.9
DDX56-208ENST00000467318 SBNO2Q9Y2G9 1366 aa20.69■□□□□ 0.9
DDX56-208ENST00000467318 SAFB2Q14151 953 aaKnown RBP eCLIP20.68■□□□□ 0.9
DDX56-208ENST00000467318 TMEM94Q12767 1356 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms