RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.96■■□□□ 1.43
COL16A1-207ENST00000466829 RIMS2Q9UQ26 1411 aa23.95■■□□□ 1.42
COL16A1-207ENST00000466829 NUTM2DQ5VT03 806 aaPredicted RBP23.95■■□□□ 1.42
COL16A1-207ENST00000466829 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
COL16A1-207ENST00000466829 LRRC7Q96NW7 1537 aa23.93■■□□□ 1.42
COL16A1-207ENST00000466829 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
COL16A1-207ENST00000466829 KCNA6P17658 529 aa23.91■■□□□ 1.42
COL16A1-207ENST00000466829 ZNF326Q5BKZ1 582 aaKnown RBP23.91■■□□□ 1.42
COL16A1-207ENST00000466829 TMEM131LA2VDJ0 1609 aa23.89■■□□□ 1.42
COL16A1-207ENST00000466829 PROSER2Q86WR7 435 aaPredicted RBP23.89■■□□□ 1.41
COL16A1-207ENST00000466829 SLC4A1APQ9BWU0 796 aaKnown RBP23.89■■□□□ 1.41
COL16A1-207ENST00000466829 ZFYVE9O95405 1425 aa23.89■■□□□ 1.41
COL16A1-207ENST00000466829 PLEKHG1Q9ULL1 1385 aa23.89■■□□□ 1.41
COL16A1-207ENST00000466829 STRCP1A6NGW2 1772 aa23.87■■□□□ 1.41
COL16A1-207ENST00000466829 HSPA1LP34931 641 aa23.84■■□□□ 1.41
COL16A1-207ENST00000466829 RBM33Q96EV2 1170 aaKnown RBP23.84■■□□□ 1.41
COL16A1-207ENST00000466829 DISP3Q9P2K9 1392 aa23.83■■□□□ 1.41
COL16A1-207ENST00000466829 MYO5BQ9ULV0 1848 aa23.83■■□□□ 1.41
COL16A1-207ENST00000466829 TMEM94Q12767 1356 aa23.82■■□□□ 1.4
COL16A1-207ENST00000466829 TBX22Q9Y458 520 aa23.82■■□□□ 1.4
COL16A1-207ENST00000466829 SPHKAPQ2M3C7 1700 aa23.79■■□□□ 1.4
COL16A1-207ENST00000466829 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
COL16A1-207ENST00000466829 FOXD1Q16676 465 aa23.76■■□□□ 1.39
COL16A1-207ENST00000466829 TRPM2O94759 1503 aa23.74■■□□□ 1.39
COL16A1-207ENST00000466829 NKTRP30414 1462 aaKnown RBP23.74■■□□□ 1.39
COL16A1-207ENST00000466829 MPHOSPH9Q99550 1183 aa23.72■■□□□ 1.39
COL16A1-207ENST00000466829 MSH6P52701 1360 aa23.72■■□□□ 1.39
COL16A1-207ENST00000466829 ADAMTS13Q76LX8 1427 aa23.72■■□□□ 1.39
COL16A1-207ENST00000466829 CLTCL1P53675 1640 aa23.7■■□□□ 1.39
COL16A1-207ENST00000466829 ALKQ9UM73 1620 aa23.7■■□□□ 1.39
COL16A1-207ENST00000466829 AMOTL2Q9Y2J4 779 aa23.7■■□□□ 1.38
COL16A1-207ENST00000466829 NWD1Q149M9 1564 aa23.69■■□□□ 1.38
COL16A1-207ENST00000466829 PIK3R4Q99570 1358 aa23.68■■□□□ 1.38
COL16A1-207ENST00000466829 DIP2AQ14689 1571 aa23.68■■□□□ 1.38
COL16A1-207ENST00000466829 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
COL16A1-207ENST00000466829 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
COL16A1-207ENST00000466829 VGFO15240 615 aaPredicted RBP23.67■■□□□ 1.38
COL16A1-207ENST00000466829 XIRP1Q702N8 1843 aaKnown RBP23.65■■□□□ 1.38
COL16A1-207ENST00000466829 SLAIN2Q9P270 581 aa23.64■■□□□ 1.37
COL16A1-207ENST00000466829 RPGRIP1LQ68CZ1 1315 aa23.63■■□□□ 1.37
COL16A1-207ENST00000466829 CCDC144AA2RUR9 1427 aa23.63■■□□□ 1.37
COL16A1-207ENST00000466829 CHD2O14647 1828 aaKnown RBP23.63■■□□□ 1.37
COL16A1-207ENST00000466829 KIF1BO60333 1816 aa23.62■■□□□ 1.37
COL16A1-207ENST00000466829 ATF3P18847 181 aa23.62■■□□□ 1.37
COL16A1-207ENST00000466829 RGL3Q3MIN7 710 aa23.62■■□□□ 1.37
COL16A1-207ENST00000466829 FAM135BQ49AJ0 1406 aa23.61■■□□□ 1.37
COL16A1-207ENST00000466829 NEXMIFQ5QGS0 1516 aa23.61■■□□□ 1.37
COL16A1-207ENST00000466829 C19orf44Q9H6X5 657 aa23.6■■□□□ 1.37
COL16A1-207ENST00000466829 METP08581 1390 aa23.6■■□□□ 1.37
COL16A1-207ENST00000466829 PTPRUQ92729 1446 aa23.59■■□□□ 1.37
COL16A1-207ENST00000466829 NCOA3Q9Y6Q9 1424 aa23.59■■□□□ 1.37
COL16A1-207ENST00000466829 RAB3GAP2Q9H2M9 1393 aa23.59■■□□□ 1.37
COL16A1-207ENST00000466829 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
COL16A1-207ENST00000466829 CADPS2Q86UW7 1296 aa23.58■■□□□ 1.37
COL16A1-207ENST00000466829 ILDR2Q71H61 639 aa23.57■■□□□ 1.36
COL16A1-207ENST00000466829 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
COL16A1-207ENST00000466829 NRXN3Q9Y4C0 1643 aa23.54■■□□□ 1.36
COL16A1-207ENST00000466829 MED1Q15648 1581 aaPredicted RBP23.5■■□□□ 1.35
COL16A1-207ENST00000466829 ROBO1Q9Y6N7 1651 aa23.5■■□□□ 1.35
COL16A1-207ENST00000466829 ADGRF5Q8IZF2 1346 aa23.48■■□□□ 1.35
COL16A1-207ENST00000466829 ANKRD30BQ9BXX2 1392 aa23.47■■□□□ 1.35
COL16A1-207ENST00000466829 SPATA31E1Q6ZUB1 1445 aa23.45■■□□□ 1.34
COL16A1-207ENST00000466829 XRN1Q8IZH2 1706 aaKnown RBP23.45■■□□□ 1.34
COL16A1-207ENST00000466829 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.45■■□□□ 1.34
COL16A1-207ENST00000466829 STK26Q9P289 416 aa23.43■■□□□ 1.34
COL16A1-207ENST00000466829 PPLO60437 1756 aa23.42■■□□□ 1.34
COL16A1-207ENST00000466829 DCCP43146 1447 aa23.42■■□□□ 1.34
COL16A1-207ENST00000466829 HRCP23327 699 aa23.41■■□□□ 1.34
COL16A1-207ENST00000466829 BRINP3Q76B58 766 aa23.41■■□□□ 1.34
COL16A1-207ENST00000466829 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
COL16A1-207ENST00000466829 ADGRL3Q9HAR2 1447 aa23.4■■□□□ 1.34
COL16A1-207ENST00000466829 SOCS7O14512 581 aa23.38■■□□□ 1.33
COL16A1-207ENST00000466829 TMEM132EQ6IEE7 984 aa23.38■■□□□ 1.33
COL16A1-207ENST00000466829 PTCH1Q13635 1447 aa23.38■■□□□ 1.33
COL16A1-207ENST00000466829 JCADQ9P266 1359 aa23.38■■□□□ 1.33
COL16A1-207ENST00000466829 PHLPP1O60346 1717 aa23.37■■□□□ 1.33
COL16A1-207ENST00000466829 MST1RQ04912 1400 aa23.34■■□□□ 1.33
COL16A1-207ENST00000466829 KDM2AQ9Y2K7 1162 aa23.33■■□□□ 1.33
COL16A1-207ENST00000466829 WAPLQ7Z5K2 1190 aa23.32■■□□□ 1.32
COL16A1-207ENST00000466829 PIK3C2GO75747 1445 aa23.32■■□□□ 1.32
COL16A1-207ENST00000466829 SETD1AO15047 1707 aaKnown RBP23.31■■□□□ 1.32
COL16A1-207ENST00000466829 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
COL16A1-207ENST00000466829 MEX3CQ5U5Q3 659 aaKnown RBP23.31■■□□□ 1.32
COL16A1-207ENST00000466829 LRPPRCP42704 1394 aaKnown RBP23.3■■□□□ 1.32
COL16A1-207ENST00000466829 DCAF11Q8TEB1 546 aa23.3■■□□□ 1.32
COL16A1-207ENST00000466829 C14orf93Q9H972 538 aaKnown RBP23.3■■□□□ 1.32
COL16A1-207ENST00000466829 ASXL1Q8IXJ9 1541 aa23.29■■□□□ 1.32
COL16A1-207ENST00000466829 DDX17Q92841 729 aaKnown RBP23.29■■□□□ 1.32
COL16A1-207ENST00000466829 NALCNQ8IZF0 1738 aa23.28■■□□□ 1.32
COL16A1-207ENST00000466829 PRAG1Q86YV5 1406 aa23.27■■□□□ 1.32
COL16A1-207ENST00000466829 COL16A1Q07092 1604 aaPredicted RBP23.27■■□□□ 1.32
COL16A1-207ENST00000466829 AHDC1Q5TGY3 1603 aaPredicted RBP23.27■■□□□ 1.32
COL16A1-207ENST00000466829 C1orf167Q5SNV9 1468 aa23.27■■□□□ 1.32
COL16A1-207ENST00000466829 IFT172Q9UG01 1749 aa23.27■■□□□ 1.32
COL16A1-207ENST00000466829 SPATA31A6Q5VVP1 1343 aa23.27■■□□□ 1.32
COL16A1-207ENST00000466829 DHX57Q6P158 1386 aaKnown RBP23.27■■□□□ 1.31
COL16A1-207ENST00000466829 ABCC11Q96J66 1382 aa23.27■■□□□ 1.31
COL16A1-207ENST00000466829 NUTM2BA6NNL0 878 aaPredicted RBP23.26■■□□□ 1.31
COL16A1-207ENST00000466829 NUTM2EB1AL46 878 aaPredicted RBP23.26■■□□□ 1.31
COL16A1-207ENST00000466829 NUTM2AQ8IVF1 878 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms