RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 INO80Q9ULG1 1556 aaPredicted RBP13.83□□□□□ -0.2
UFD1-206ENST00000466373 IQGAP1P46940 1657 aa13.83□□□□□ -0.2
UFD1-206ENST00000466373 WDR43Q15061 677 aaKnown RBP eCLIP13.83□□□□□ -0.2
UFD1-206ENST00000466373 CDCA8Q53HL2 280 aa13.83□□□□□ -0.2
UFD1-206ENST00000466373 CFAP65Q6ZU64 1925 aaKnown RBP13.82□□□□□ -0.2
UFD1-206ENST00000466373 GGT6Q6P531 493 aa13.82□□□□□ -0.2
UFD1-206ENST00000466373 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
UFD1-206ENST00000466373 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
UFD1-206ENST00000466373 EIF3AQ14152 1382 aaKnown RBP13.8□□□□□ -0.2
UFD1-206ENST00000466373 CCDC146Q8IYE0 955 aa13.79□□□□□ -0.2
UFD1-206ENST00000466373 STAC3Q96MF2 364 aa13.79□□□□□ -0.2
UFD1-206ENST00000466373 MROH1Q8NDA8 1641 aa13.78□□□□□ -0.2
UFD1-206ENST00000466373 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
UFD1-206ENST00000466373 VWDEQ8N2E2 1590 aa13.78□□□□□ -0.2
UFD1-206ENST00000466373 PLEKHH1Q9ULM0 1364 aa13.77□□□□□ -0.21
UFD1-206ENST00000466373 KIDINS220Q9ULH0 1771 aa13.77□□□□□ -0.21
UFD1-206ENST00000466373 NUTM2DQ5VT03 806 aaPredicted RBP13.77□□□□□ -0.21
UFD1-206ENST00000466373 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
UFD1-206ENST00000466373 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
UFD1-206ENST00000466373 SYNMO15061 1565 aa13.76□□□□□ -0.21
UFD1-206ENST00000466373 C20orf194Q5TEA3 1177 aa13.76□□□□□ -0.21
UFD1-206ENST00000466373 SKAP1Q86WV1 359 aa13.76□□□□□ -0.21
UFD1-206ENST00000466373 CRBNQ96SW2 442 aa13.76□□□□□ -0.21
UFD1-206ENST00000466373 TMEM132EQ6IEE7 984 aa13.75□□□□□ -0.21
UFD1-206ENST00000466373 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
UFD1-206ENST00000466373 NOS1P29475 1434 aa13.75□□□□□ -0.21
UFD1-206ENST00000466373 PPRC1Q5VV67 1664 aaKnown RBP13.75□□□□□ -0.21
UFD1-206ENST00000466373 ZMYM4Q5VZL5 1548 aa13.75□□□□□ -0.21
UFD1-206ENST00000466373 ABCA6Q8N139 1617 aa13.75□□□□□ -0.21
UFD1-206ENST00000466373 KIF1BO60333 1816 aa13.74□□□□□ -0.21
UFD1-206ENST00000466373 MAP3K4Q9Y6R4 1608 aa13.74□□□□□ -0.21
UFD1-206ENST00000466373 EFCAB6Q5THR3 1501 aa13.74□□□□□ -0.21
UFD1-206ENST00000466373 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
UFD1-206ENST00000466373 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
UFD1-206ENST00000466373 MYOM1P52179 1685 aa13.74□□□□□ -0.21
UFD1-206ENST00000466373 CD109Q6YHK3 1445 aa13.73□□□□□ -0.21
UFD1-206ENST00000466373 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
UFD1-206ENST00000466373 RAPGEF3O95398 923 aa13.73□□□□□ -0.21
UFD1-206ENST00000466373 TNNT2P45379 298 aaPredicted RBP13.73□□□□□ -0.21
UFD1-206ENST00000466373 ERVK-7P63135 1459 aa13.73□□□□□ -0.21
UFD1-206ENST00000466373 MROH2AA6NES4 1674 aa13.73□□□□□ -0.21
UFD1-206ENST00000466373 KDM5AP29375 1690 aaKnown RBP13.72□□□□□ -0.21
UFD1-206ENST00000466373 APAF1O14727 1248 aa13.72□□□□□ -0.21
UFD1-206ENST00000466373 DUSP27Q5VZP5 1158 aa13.72□□□□□ -0.21
UFD1-206ENST00000466373 NPM2Q86SE8 214 aaKnown RBP13.72□□□□□ -0.21
UFD1-206ENST00000466373 INSRP06213 1382 aa13.72□□□□□ -0.21
UFD1-206ENST00000466373 GOLGA2Q08379 1002 aa13.72□□□□□ -0.21
UFD1-206ENST00000466373 ANP32AP39687 249 aaKnown RBP13.71□□□□□ -0.21
UFD1-206ENST00000466373 NOP58Q9Y2X3 529 aaKnown RBP13.71□□□□□ -0.22
UFD1-206ENST00000466373 MYOM2P54296 1465 aa13.71□□□□□ -0.22
UFD1-206ENST00000466373 CENPJQ9HC77 1338 aaPredicted RBP13.71□□□□□ -0.22
UFD1-206ENST00000466373 NPATQ14207 1427 aa13.7□□□□□ -0.22
UFD1-206ENST00000466373 SLC12A5Q9H2X9 1139 aa13.7□□□□□ -0.22
UFD1-206ENST00000466373 KIAA1210Q9ULL0 1709 aa13.7□□□□□ -0.22
UFD1-206ENST00000466373 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
UFD1-206ENST00000466373 PIK3C2GO75747 1445 aa13.69□□□□□ -0.22
UFD1-206ENST00000466373 POGZQ7Z3K3 1410 aa13.68□□□□□ -0.22
UFD1-206ENST00000466373 ZNF521Q96K83 1311 aa13.68□□□□□ -0.22
UFD1-206ENST00000466373 SAFB2Q14151 953 aaKnown RBP eCLIP13.67□□□□□ -0.22
UFD1-206ENST00000466373 NPC1L1Q9UHC9 1359 aa13.67□□□□□ -0.22
UFD1-206ENST00000466373 TCERG1O14776 1098 aaKnown RBP13.67□□□□□ -0.22
UFD1-206ENST00000466373 PDE4AP27815 886 aa13.67□□□□□ -0.22
UFD1-206ENST00000466373 NBR1Q14596 966 aa13.67□□□□□ -0.22
UFD1-206ENST00000466373 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
UFD1-206ENST00000466373 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
UFD1-206ENST00000466373 SLFN5Q08AF3 891 aa13.66□□□□□ -0.22
UFD1-206ENST00000466373 IPO9Q96P70 1041 aaKnown RBP13.66□□□□□ -0.22
UFD1-206ENST00000466373 C14orf93Q9H972 538 aaKnown RBP13.66□□□□□ -0.22
UFD1-206ENST00000466373 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
UFD1-206ENST00000466373 FRMPD1Q5SYB0 1578 aa13.66□□□□□ -0.22
UFD1-206ENST00000466373 NEUROD2Q15784 382 aa13.66□□□□□ -0.22
UFD1-206ENST00000466373 ADGRB3O60242 1522 aa13.65□□□□□ -0.22
UFD1-206ENST00000466373 NEURL4Q96JN8 1562 aa13.65□□□□□ -0.22
UFD1-206ENST00000466373 MORC1Q86VD1 984 aa13.65□□□□□ -0.23
UFD1-206ENST00000466373 NSD3Q9BZ95 1437 aa13.65□□□□□ -0.23
UFD1-206ENST00000466373 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
UFD1-206ENST00000466373 LMTK2Q8IWU2 1503 aa13.64□□□□□ -0.23
UFD1-206ENST00000466373 BCAR3O75815 825 aa13.63□□□□□ -0.23
UFD1-206ENST00000466373 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
UFD1-206ENST00000466373 MLH3Q9UHC1 1453 aa13.63□□□□□ -0.23
UFD1-206ENST00000466373 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
UFD1-206ENST00000466373 HECW2Q9P2P5 1572 aa13.63□□□□□ -0.23
UFD1-206ENST00000466373 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
UFD1-206ENST00000466373 STK26Q9P289 416 aa13.62□□□□□ -0.23
UFD1-206ENST00000466373 SBNO2Q9Y2G9 1366 aa13.61□□□□□ -0.23
UFD1-206ENST00000466373 ABCC3O15438 1527 aa13.61□□□□□ -0.23
UFD1-206ENST00000466373 PPLO60437 1756 aa13.6□□□□□ -0.23
UFD1-206ENST00000466373 IDI1Q13907 227 aa13.6□□□□□ -0.23
UFD1-206ENST00000466373 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.6□□□□□ -0.23
UFD1-206ENST00000466373 CABP2Q9NPB3 220 aa13.6□□□□□ -0.23
UFD1-206ENST00000466373 TRMT2AQ8IZ69 625 aaKnown RBP13.59□□□□□ -0.23
UFD1-206ENST00000466373 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
UFD1-206ENST00000466373 E9PSI1 815 aa13.59□□□□□ -0.23
UFD1-206ENST00000466373 ADGRB1O14514 1584 aa13.59□□□□□ -0.23
UFD1-206ENST00000466373 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.23
UFD1-206ENST00000466373 MTHFSP49914 203 aa13.58□□□□□ -0.23
UFD1-206ENST00000466373 CFAP74Q9C0B2 1584 aa13.58□□□□□ -0.24
UFD1-206ENST00000466373 SETBP1Q9Y6X0 1596 aa13.58□□□□□ -0.24
UFD1-206ENST00000466373 NKTRP30414 1462 aaKnown RBP13.58□□□□□ -0.24
UFD1-206ENST00000466373 SIGLEC1Q9BZZ2 1709 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms