RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 NUTM2DQ5VT03 806 aaPredicted RBP24.68■■□□□ 1.54
PTPRU-206ENST00000465525 NBPF8Q3BBV2 869 aa24.67■■□□□ 1.54
PTPRU-206ENST00000465525 NEXMIFQ5QGS0 1516 aa24.67■■□□□ 1.54
PTPRU-206ENST00000465525 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
PTPRU-206ENST00000465525 RPGRIP1LQ68CZ1 1315 aa24.65■■□□□ 1.54
PTPRU-206ENST00000465525 LMTK3Q96Q04 1460 aa24.63■■□□□ 1.53
PTPRU-206ENST00000465525 HDGFP51858 240 aaKnown RBP24.62■■□□□ 1.53
PTPRU-206ENST00000465525 TMEM2Q9UHN6 1383 aa24.62■■□□□ 1.53
PTPRU-206ENST00000465525 SENP3Q9H4L4 574 aaPredicted RBP24.62■■□□□ 1.53
PTPRU-206ENST00000465525 PRAG1Q86YV5 1406 aa24.61■■□□□ 1.53
PTPRU-206ENST00000465525 ADGRF5Q8IZF2 1346 aa24.6■■□□□ 1.53
PTPRU-206ENST00000465525 MYOM2P54296 1465 aa24.6■■□□□ 1.53
PTPRU-206ENST00000465525 RIMS2Q9UQ26 1411 aa24.59■■□□□ 1.53
PTPRU-206ENST00000465525 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.59■■□□□ 1.53
PTPRU-206ENST00000465525 STAC3Q96MF2 364 aa24.59■■□□□ 1.53
PTPRU-206ENST00000465525 SLIT1O75093 1534 aa24.58■■□□□ 1.53
PTPRU-206ENST00000465525 EID1Q9Y6B2 187 aa24.58■■□□□ 1.53
PTPRU-206ENST00000465525 ARHGAP23Q9P227 1491 aa24.58■■□□□ 1.52
PTPRU-206ENST00000465525 TRPM1Q7Z4N2 1603 aa24.56■■□□□ 1.52
PTPRU-206ENST00000465525 VGFO15240 615 aaPredicted RBP24.56■■□□□ 1.52
PTPRU-206ENST00000465525 HSPA2P54652 639 aa24.56■■□□□ 1.52
PTPRU-206ENST00000465525 TXNDC2Q86VQ3 553 aa24.56■■□□□ 1.52
PTPRU-206ENST00000465525 ZFYVE9O95405 1425 aa24.56■■□□□ 1.52
PTPRU-206ENST00000465525 ANKLE2Q86XL3 938 aa24.56■■□□□ 1.52
PTPRU-206ENST00000465525 LTKP29376 864 aa24.53■■□□□ 1.52
PTPRU-206ENST00000465525 NRXN1Q9ULB1 1477 aa24.53■■□□□ 1.52
PTPRU-206ENST00000465525 RALGAPBQ86X10 1494 aa24.51■■□□□ 1.51
PTPRU-206ENST00000465525 PIK3C2GO75747 1445 aa24.5■■□□□ 1.51
PTPRU-206ENST00000465525 SCAF11Q99590 1463 aaKnown RBP24.5■■□□□ 1.51
PTPRU-206ENST00000465525 NBPF1Q3BBV0 1214 aa24.48■■□□□ 1.51
PTPRU-206ENST00000465525 CFAP70Q5T0N1 1121 aa24.47■■□□□ 1.51
PTPRU-206ENST00000465525 NCKAP5LQ9HCH0 1330 aa24.46■■□□□ 1.51
PTPRU-206ENST00000465525 KIAA1210Q9ULL0 1709 aa24.46■■□□□ 1.51
PTPRU-206ENST00000465525 ROCK2O75116 1388 aaKnown RBP24.46■■□□□ 1.51
PTPRU-206ENST00000465525 IQGAP1P46940 1657 aa24.46■■□□□ 1.51
PTPRU-206ENST00000465525 PLEKHG1Q9ULL1 1385 aa24.44■■□□□ 1.5
PTPRU-206ENST00000465525 NRXN3Q9Y4C0 1643 aa24.44■■□□□ 1.5
PTPRU-206ENST00000465525 BCANQ96GW7 911 aa24.43■■□□□ 1.5
PTPRU-206ENST00000465525 MED14O60244 1454 aa24.42■■□□□ 1.5
PTPRU-206ENST00000465525 LAMC1P11047 1609 aa24.41■■□□□ 1.5
PTPRU-206ENST00000465525 POLR1AO95602 1720 aaPredicted RBP24.41■■□□□ 1.5
PTPRU-206ENST00000465525 CARD11Q9BXL7 1154 aa24.4■■□□□ 1.5
PTPRU-206ENST00000465525 C14orf93Q9H972 538 aaKnown RBP24.4■■□□□ 1.5
PTPRU-206ENST00000465525 ALKQ9UM73 1620 aa24.4■■□□□ 1.5
PTPRU-206ENST00000465525 NPHP4O75161 1426 aaPredicted RBP24.4■■□□□ 1.5
PTPRU-206ENST00000465525 HIRIP3Q9BW71 556 aaPredicted RBP24.39■■□□□ 1.49
PTPRU-206ENST00000465525 SETD1AO15047 1707 aaKnown RBP24.38■■□□□ 1.49
PTPRU-206ENST00000465525 SETBP1Q9Y6X0 1596 aa24.38■■□□□ 1.49
PTPRU-206ENST00000465525 TMEM132EQ6IEE7 984 aa24.37■■□□□ 1.49
PTPRU-206ENST00000465525 STRCQ7RTU9 1775 aa24.37■■□□□ 1.49
PTPRU-206ENST00000465525 ASXL1Q8IXJ9 1541 aa24.37■■□□□ 1.49
PTPRU-206ENST00000465525 GPRASP1Q5JY77 1395 aa24.36■■□□□ 1.49
PTPRU-206ENST00000465525 DMRT2Q9Y5R5 561 aa24.36■■□□□ 1.49
PTPRU-206ENST00000465525 ADGRB1O14514 1584 aa24.35■■□□□ 1.49
PTPRU-206ENST00000465525 TBX22Q9Y458 520 aa24.35■■□□□ 1.49
PTPRU-206ENST00000465525 SLC26A8Q96RN1 970 aa24.34■■□□□ 1.49
PTPRU-206ENST00000465525 USP47Q96K76 1375 aa24.33■■□□□ 1.49
PTPRU-206ENST00000465525 HSPA5P11021 654 aaKnown RBP24.33■■□□□ 1.49
PTPRU-206ENST00000465525 ADAMTS13Q76LX8 1427 aa24.33■■□□□ 1.49
PTPRU-206ENST00000465525 EIF4G2P78344 907 aaKnown RBP eCLIP24.31■■□□□ 1.48
PTPRU-206ENST00000465525 METP08581 1390 aa24.29■■□□□ 1.48
PTPRU-206ENST00000465525 DIP2AQ14689 1571 aa24.28■■□□□ 1.48
PTPRU-206ENST00000465525 STK26Q9P289 416 aa24.28■■□□□ 1.48
PTPRU-206ENST00000465525 TRAK1Q9UPV9 953 aa24.26■■□□□ 1.47
PTPRU-206ENST00000465525 PIK3R4Q99570 1358 aa24.25■■□□□ 1.47
PTPRU-206ENST00000465525 ARHGEF28Q8N1W1 1705 aaKnown RBP24.24■■□□□ 1.47
PTPRU-206ENST00000465525 YTHDC2Q9H6S0 1430 aaKnown RBP24.24■■□□□ 1.47
PTPRU-206ENST00000465525 ST20-MTHFSA0A0A6YYL1 179 aa24.24■■□□□ 1.47
PTPRU-206ENST00000465525 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
PTPRU-206ENST00000465525 PTPRUQ92729 1446 aa24.19■■□□□ 1.46
PTPRU-206ENST00000465525 LRPPRCP42704 1394 aaKnown RBP24.19■■□□□ 1.46
PTPRU-206ENST00000465525 KCNA6P17658 529 aa24.18■■□□□ 1.46
PTPRU-206ENST00000465525 AMOTL2Q9Y2J4 779 aa24.18■■□□□ 1.46
PTPRU-206ENST00000465525 EIF3AQ14152 1382 aaKnown RBP24.17■■□□□ 1.46
PTPRU-206ENST00000465525 QRICH2Q9H0J4 1663 aa24.17■■□□□ 1.46
PTPRU-206ENST00000465525 KNDC1Q76NI1 1749 aa24.17■■□□□ 1.46
PTPRU-206ENST00000465525 ABCC11Q96J66 1382 aa24.15■■□□□ 1.46
PTPRU-206ENST00000465525 CHD2O14647 1828 aaKnown RBP24.15■■□□□ 1.46
PTPRU-206ENST00000465525 SAFB2Q14151 953 aaKnown RBP eCLIP24.15■■□□□ 1.46
PTPRU-206ENST00000465525 XRN1Q8IZH2 1706 aaKnown RBP24.13■■□□□ 1.45
PTPRU-206ENST00000465525 CENPJQ9HC77 1338 aaPredicted RBP24.13■■□□□ 1.45
PTPRU-206ENST00000465525 PRAM1Q96QH2 718 aa24.12■■□□□ 1.45
PTPRU-206ENST00000465525 C11orf95C9JLR9 678 aaPredicted RBP24.11■■□□□ 1.45
PTPRU-206ENST00000465525 SIRT1Q96EB6 747 aa24.11■■□□□ 1.45
PTPRU-206ENST00000465525 TESK2Q96S53 571 aa24.11■■□□□ 1.45
PTPRU-206ENST00000465525 CPS1P31327 1500 aa24.11■■□□□ 1.45
PTPRU-206ENST00000465525 DLC1Q96QB1 1528 aa24.11■■□□□ 1.45
PTPRU-206ENST00000465525 WAPLQ7Z5K2 1190 aa24.11■■□□□ 1.45
PTPRU-206ENST00000465525 PLEKHH1Q9ULM0 1364 aa24.1■■□□□ 1.45
PTPRU-206ENST00000465525 POGKQ9P215 609 aa24.1■■□□□ 1.45
PTPRU-206ENST00000465525 ZNF335Q9H4Z2 1342 aaPredicted RBP24.1■■□□□ 1.45
PTPRU-206ENST00000465525 ROBO2Q9HCK4 1378 aa24.1■■□□□ 1.45
PTPRU-206ENST00000465525 TECPR2O15040 1411 aa24.1■■□□□ 1.45
PTPRU-206ENST00000465525 NWD1Q149M9 1564 aa24.08■■□□□ 1.45
PTPRU-206ENST00000465525 DISP3Q9P2K9 1392 aa24.06■■□□□ 1.44
PTPRU-206ENST00000465525 STRCP1A6NGW2 1772 aa24.06■■□□□ 1.44
PTPRU-206ENST00000465525 PTCH1Q13635 1447 aa24.06■■□□□ 1.44
PTPRU-206ENST00000465525 POLR3GLQ9BT43 218 aa24.05■■□□□ 1.44
PTPRU-206ENST00000465525 FAM135BQ49AJ0 1406 aa24.05■■□□□ 1.44
PTPRU-206ENST00000465525 MINK1Q8N4C8 1332 aaPredicted RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms