RNA–Protein interactions for RNA: ENST00000465271.5

CNIH4-205, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNIH4, Length 4,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-205ENST00000465271 STRCQ7RTU9 1775 aa13.13□□□□□ -0.31
CNIH4-205ENST00000465271 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
CNIH4-205ENST00000465271 DLC1Q96QB1 1528 aa13.13□□□□□ -0.31
CNIH4-205ENST00000465271 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
CNIH4-205ENST00000465271 NWD1Q149M9 1564 aa13.12□□□□□ -0.31
CNIH4-205ENST00000465271 PKD2Q13563 968 aa13.12□□□□□ -0.31
CNIH4-205ENST00000465271 ANKRD26Q9UPS8 1709 aa13.11□□□□□ -0.31
CNIH4-205ENST00000465271 DIP2AQ14689 1571 aa13.1□□□□□ -0.31
CNIH4-205ENST00000465271 AKAP12Q02952 1782 aa13.1□□□□□ -0.31
CNIH4-205ENST00000465271 CEP170BQ9Y4F5 1589 aaPredicted RBP13.1□□□□□ -0.31
CNIH4-205ENST00000465271 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
CNIH4-205ENST00000465271 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.09□□□□□ -0.31
CNIH4-205ENST00000465271 L3MBTL2Q969R5 705 aa13.08□□□□□ -0.31
CNIH4-205ENST00000465271 CCDC144AA2RUR9 1427 aa13.08□□□□□ -0.32
CNIH4-205ENST00000465271 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
CNIH4-205ENST00000465271 TULP4Q9NRJ4 1543 aa13.06□□□□□ -0.32
CNIH4-205ENST00000465271 TECPR2O15040 1411 aa13.06□□□□□ -0.32
CNIH4-205ENST00000465271 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
CNIH4-205ENST00000465271 SLC4A1APQ9BWU0 796 aaKnown RBP13.04□□□□□ -0.32
CNIH4-205ENST00000465271 NALCNQ8IZF0 1738 aa13.02□□□□□ -0.32
CNIH4-205ENST00000465271 SBNO2Q9Y2G9 1366 aa13.02□□□□□ -0.33
CNIH4-205ENST00000465271 ADAMTS13Q76LX8 1427 aa13.01□□□□□ -0.33
CNIH4-205ENST00000465271 CRYBG1Q9Y4K1 1723 aa13□□□□□ -0.33
CNIH4-205ENST00000465271 ZMYM3Q14202 1370 aa13□□□□□ -0.33
CNIH4-205ENST00000465271 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
CNIH4-205ENST00000465271 SHPRHQ149N8 1683 aa12.98□□□□□ -0.33
CNIH4-205ENST00000465271 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
CNIH4-205ENST00000465271 KIF3BO15066 747 aa12.98□□□□□ -0.33
CNIH4-205ENST00000465271 TESK2Q96S53 571 aa12.98□□□□□ -0.33
CNIH4-205ENST00000465271 FMN2Q9NZ56 1722 aa12.97□□□□□ -0.33
CNIH4-205ENST00000465271 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
CNIH4-205ENST00000465271 KANK1Q14678 1352 aa12.96□□□□□ -0.33
CNIH4-205ENST00000465271 RGPD8O14715 1765 aaPredicted RBP12.95□□□□□ -0.34
CNIH4-205ENST00000465271 KIF20BQ96Q89 1820 aa12.95□□□□□ -0.34
CNIH4-205ENST00000465271 STAC3Q96MF2 364 aa12.94□□□□□ -0.34
CNIH4-205ENST00000465271 SETD1BQ9UPS6 1966 aaKnown RBP12.94□□□□□ -0.34
CNIH4-205ENST00000465271 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
CNIH4-205ENST00000465271 TONSLQ96HA7 1378 aa12.92□□□□□ -0.34
CNIH4-205ENST00000465271 PTPRUQ92729 1446 aa12.92□□□□□ -0.34
CNIH4-205ENST00000465271 RPGRIP1LQ68CZ1 1315 aa12.91□□□□□ -0.34
CNIH4-205ENST00000465271 ADGRF5Q8IZF2 1346 aa12.91□□□□□ -0.34
CNIH4-205ENST00000465271 PHRF1Q9P1Y6 1649 aaKnown RBP12.9□□□□□ -0.34
CNIH4-205ENST00000465271 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
CNIH4-205ENST00000465271 LMTK3Q96Q04 1460 aa12.89□□□□□ -0.35
CNIH4-205ENST00000465271 CCDC7Q96M83 1385 aa12.89□□□□□ -0.35
CNIH4-205ENST00000465271 ZNF316A6NFI3 1004 aaPredicted RBP12.89□□□□□ -0.35
CNIH4-205ENST00000465271 ITSN1Q15811 1721 aa12.89□□□□□ -0.35
CNIH4-205ENST00000465271 IDI1Q13907 227 aa12.88□□□□□ -0.35
CNIH4-205ENST00000465271 USP47Q96K76 1375 aa12.88□□□□□ -0.35
CNIH4-205ENST00000465271 DISP3Q9P2K9 1392 aa12.88□□□□□ -0.35
CNIH4-205ENST00000465271 LRRC7Q96NW7 1537 aa12.88□□□□□ -0.35
CNIH4-205ENST00000465271 CDC42BPGQ6DT37 1551 aa12.87□□□□□ -0.35
CNIH4-205ENST00000465271 C14orf93Q9H972 538 aaKnown RBP12.87□□□□□ -0.35
CNIH4-205ENST00000465271 FBXO31Q5XUX0 539 aaPredicted RBP12.86□□□□□ -0.35
CNIH4-205ENST00000465271 TRIM52Q96A61 297 aa12.86□□□□□ -0.35
CNIH4-205ENST00000465271 ARID4BQ4LE39 1312 aaPredicted RBP12.86□□□□□ -0.35
CNIH4-205ENST00000465271 TMEM2Q9UHN6 1383 aa12.86□□□□□ -0.35
CNIH4-205ENST00000465271 PLEKHG1Q9ULL1 1385 aa12.86□□□□□ -0.35
CNIH4-205ENST00000465271 SLC52A1Q9NWF4 448 aa12.86□□□□□ -0.35
CNIH4-205ENST00000465271 PTCH1Q13635 1447 aa12.85□□□□□ -0.35
CNIH4-205ENST00000465271 NBPF1Q3BBV0 1214 aa12.85□□□□□ -0.35
CNIH4-205ENST00000465271 RGPD1P0DJD0 1748 aa12.85□□□□□ -0.35
CNIH4-205ENST00000465271 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
CNIH4-205ENST00000465271 TNRQ92752 1358 aa12.84□□□□□ -0.35
CNIH4-205ENST00000465271 FAM135BQ49AJ0 1406 aa12.83□□□□□ -0.35
CNIH4-205ENST00000465271 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
CNIH4-205ENST00000465271 HSPA5P11021 654 aaKnown RBP12.82□□□□□ -0.36
CNIH4-205ENST00000465271 KIF7Q2M1P5 1343 aa12.82□□□□□ -0.36
CNIH4-205ENST00000465271 CAMTA1Q9Y6Y1 1673 aa12.81□□□□□ -0.36
CNIH4-205ENST00000465271 PER1O15534 1290 aaPredicted RBP12.81□□□□□ -0.36
CNIH4-205ENST00000465271 YTHDC2Q9H6S0 1430 aaKnown RBP12.8□□□□□ -0.36
CNIH4-205ENST00000465271 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
CNIH4-205ENST00000465271 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
CNIH4-205ENST00000465271 PIK3C2AO00443 1686 aa12.79□□□□□ -0.36
CNIH4-205ENST00000465271 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
CNIH4-205ENST00000465271 METP08581 1390 aa12.79□□□□□ -0.36
CNIH4-205ENST00000465271 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
CNIH4-205ENST00000465271 MST1RQ04912 1400 aa12.78□□□□□ -0.36
CNIH4-205ENST00000465271 ATP7BP35670 1465 aa12.78□□□□□ -0.36
CNIH4-205ENST00000465271 ABCC11Q96J66 1382 aa12.77□□□□□ -0.36
CNIH4-205ENST00000465271 NKTRP30414 1462 aaKnown RBP12.77□□□□□ -0.37
CNIH4-205ENST00000465271 LRPPRCP42704 1394 aaKnown RBP12.76□□□□□ -0.37
CNIH4-205ENST00000465271 PEAK1Q9H792 1746 aa12.76□□□□□ -0.37
CNIH4-205ENST00000465271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
CNIH4-205ENST00000465271 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
CNIH4-205ENST00000465271 GGT6Q6P531 493 aa12.75□□□□□ -0.37
CNIH4-205ENST00000465271 NPC1L1Q9UHC9 1359 aa12.75□□□□□ -0.37
CNIH4-205ENST00000465271 SIRT1Q96EB6 747 aa12.75□□□□□ -0.37
CNIH4-205ENST00000465271 DCAF11Q8TEB1 546 aa12.74□□□□□ -0.37
CNIH4-205ENST00000465271 ROCK2O75116 1388 aaKnown RBP12.74□□□□□ -0.37
CNIH4-205ENST00000465271 PARD3Q8TEW0 1356 aa12.74□□□□□ -0.37
CNIH4-205ENST00000465271 LMO7Q8WWI1 1683 aa12.74□□□□□ -0.37
CNIH4-205ENST00000465271 CPSF1Q10570 1443 aaKnown RBP12.74□□□□□ -0.37
CNIH4-205ENST00000465271 KDM4FA0A1W2PPD8 638 aa12.73□□□□□ -0.37
CNIH4-205ENST00000465271 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
CNIH4-205ENST00000465271 LTKP29376 864 aa12.72□□□□□ -0.37
CNIH4-205ENST00000465271 SMG6Q86US8 1419 aaKnown RBP12.72□□□□□ -0.37
CNIH4-205ENST00000465271 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
CNIH4-205ENST00000465271 NHSL1Q5SYE7 1610 aa12.71□□□□□ -0.38
CNIH4-205ENST00000465271 LTBP4Q8N2S1 1624 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms