RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 PPLO60437 1756 aa19.23■□□□□ 0.67
ATF3-208ENST00000465155 A2ML1A8K2U0 1454 aa19.23■□□□□ 0.67
ATF3-208ENST00000465155 CEP170BQ9Y4F5 1589 aaPredicted RBP19.21■□□□□ 0.67
ATF3-208ENST00000465155 ZNF142P52746 1687 aaPredicted RBP19.2■□□□□ 0.66
ATF3-208ENST00000465155 NEXMIFQ5QGS0 1516 aa19.19■□□□□ 0.66
ATF3-208ENST00000465155 RPGRIP1LQ68CZ1 1315 aa19.18■□□□□ 0.66
ATF3-208ENST00000465155 MYOM2P54296 1465 aa19.17■□□□□ 0.66
ATF3-208ENST00000465155 UHRF1BP1Q6BDS2 1440 aa19.17■□□□□ 0.66
ATF3-208ENST00000465155 NBPF8Q3BBV2 869 aa19.15■□□□□ 0.66
ATF3-208ENST00000465155 STAC3Q96MF2 364 aa19.15■□□□□ 0.66
ATF3-208ENST00000465155 PRAG1Q86YV5 1406 aa19.15■□□□□ 0.66
ATF3-208ENST00000465155 NUTM2DQ5VT03 806 aaPredicted RBP19.14■□□□□ 0.66
ATF3-208ENST00000465155 RIMS2Q9UQ26 1411 aa19.14■□□□□ 0.65
ATF3-208ENST00000465155 ADGRF5Q8IZF2 1346 aa19.13■□□□□ 0.65
ATF3-208ENST00000465155 TMEM2Q9UHN6 1383 aa19.13■□□□□ 0.65
ATF3-208ENST00000465155 ZFYVE9O95405 1425 aa19.12■□□□□ 0.65
ATF3-208ENST00000465155 VGFO15240 615 aaPredicted RBP19.12■□□□□ 0.65
ATF3-208ENST00000465155 THEMISQ8N1K5 641 aaPredicted RBP19.12■□□□□ 0.65
ATF3-208ENST00000465155 TRPM1Q7Z4N2 1603 aa19.11■□□□□ 0.65
ATF3-208ENST00000465155 NRXN1Q9ULB1 1477 aa19.11■□□□□ 0.65
ATF3-208ENST00000465155 SLIT1O75093 1534 aa19.1■□□□□ 0.65
ATF3-208ENST00000465155 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
ATF3-208ENST00000465155 HDGFP51858 240 aaKnown RBP19.08■□□□□ 0.65
ATF3-208ENST00000465155 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.08■□□□□ 0.65
ATF3-208ENST00000465155 PIK3C2GO75747 1445 aa19.08■□□□□ 0.65
ATF3-208ENST00000465155 RALGAPBQ86X10 1494 aa19.07■□□□□ 0.64
ATF3-208ENST00000465155 KIAA1210Q9ULL0 1709 aa19.07■□□□□ 0.64
ATF3-208ENST00000465155 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
ATF3-208ENST00000465155 EID1Q9Y6B2 187 aa19.05■□□□□ 0.64
ATF3-208ENST00000465155 LAMC1P11047 1609 aa19.04■□□□□ 0.64
ATF3-208ENST00000465155 LTKP29376 864 aa19.03■□□□□ 0.64
ATF3-208ENST00000465155 ROCK2O75116 1388 aaKnown RBP19.03■□□□□ 0.64
ATF3-208ENST00000465155 CFAP70Q5T0N1 1121 aa19.03■□□□□ 0.64
ATF3-208ENST00000465155 SCAF11Q99590 1463 aaKnown RBP19.02■□□□□ 0.64
ATF3-208ENST00000465155 IQGAP1P46940 1657 aa19.02■□□□□ 0.64
ATF3-208ENST00000465155 NBPF1Q3BBV0 1214 aa19.02■□□□□ 0.64
ATF3-208ENST00000465155 LMTK3Q96Q04 1460 aa19.01■□□□□ 0.63
ATF3-208ENST00000465155 NRXN3Q9Y4C0 1643 aa19.01■□□□□ 0.63
ATF3-208ENST00000465155 POLR1AO95602 1720 aaPredicted RBP19■□□□□ 0.63
ATF3-208ENST00000465155 C14orf93Q9H972 538 aaKnown RBP19■□□□□ 0.63
ATF3-208ENST00000465155 ALKQ9UM73 1620 aa19■□□□□ 0.63
ATF3-208ENST00000465155 SETBP1Q9Y6X0 1596 aa19■□□□□ 0.63
ATF3-208ENST00000465155 PLEKHG1Q9ULL1 1385 aa19■□□□□ 0.63
ATF3-208ENST00000465155 ANKLE2Q86XL3 938 aa19■□□□□ 0.63
ATF3-208ENST00000465155 BCANQ96GW7 911 aa18.99■□□□□ 0.63
ATF3-208ENST00000465155 CARD11Q9BXL7 1154 aa18.99■□□□□ 0.63
ATF3-208ENST00000465155 GPRASP1Q5JY77 1395 aa18.98■□□□□ 0.63
ATF3-208ENST00000465155 SETD1AO15047 1707 aaKnown RBP18.98■□□□□ 0.63
ATF3-208ENST00000465155 HSPA2P54652 639 aa18.96■□□□□ 0.63
ATF3-208ENST00000465155 ADGRB1O14514 1584 aa18.95■□□□□ 0.62
ATF3-208ENST00000465155 TMEM132EQ6IEE7 984 aa18.94■□□□□ 0.62
ATF3-208ENST00000465155 ASXL1Q8IXJ9 1541 aa18.94■□□□□ 0.62
ATF3-208ENST00000465155 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
ATF3-208ENST00000465155 NCKAP5LQ9HCH0 1330 aa18.93■□□□□ 0.62
ATF3-208ENST00000465155 EIF4G2P78344 907 aaKnown RBP eCLIP18.92■□□□□ 0.62
ATF3-208ENST00000465155 USP47Q96K76 1375 aa18.92■□□□□ 0.62
ATF3-208ENST00000465155 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
ATF3-208ENST00000465155 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
ATF3-208ENST00000465155 SLC26A8Q96RN1 970 aa18.91■□□□□ 0.62
ATF3-208ENST00000465155 MED14O60244 1454 aa18.91■□□□□ 0.62
ATF3-208ENST00000465155 METP08581 1390 aa18.89■□□□□ 0.62
ATF3-208ENST00000465155 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.62
ATF3-208ENST00000465155 HIRIP3Q9BW71 556 aaPredicted RBP18.89■□□□□ 0.62
ATF3-208ENST00000465155 STRCQ7RTU9 1775 aa18.88■□□□□ 0.61
ATF3-208ENST00000465155 YTHDC2Q9H6S0 1430 aaKnown RBP18.87■□□□□ 0.61
ATF3-208ENST00000465155 TBX22Q9Y458 520 aa18.87■□□□□ 0.61
ATF3-208ENST00000465155 STK26Q9P289 416 aa18.86■□□□□ 0.61
ATF3-208ENST00000465155 TRAK1Q9UPV9 953 aa18.86■□□□□ 0.61
ATF3-208ENST00000465155 ARHGEF28Q8N1W1 1705 aaKnown RBP18.86■□□□□ 0.61
ATF3-208ENST00000465155 EIF3AQ14152 1382 aaKnown RBP18.85■□□□□ 0.61
ATF3-208ENST00000465155 ST20-MTHFSA0A0A6YYL1 179 aa18.84■□□□□ 0.61
ATF3-208ENST00000465155 LRPPRCP42704 1394 aaKnown RBP18.84■□□□□ 0.61
ATF3-208ENST00000465155 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.61
ATF3-208ENST00000465155 KNDC1Q76NI1 1749 aa18.83■□□□□ 0.6
ATF3-208ENST00000465155 CHD2O14647 1828 aaKnown RBP18.81■□□□□ 0.6
ATF3-208ENST00000465155 PTPRUQ92729 1446 aa18.81■□□□□ 0.6
ATF3-208ENST00000465155 ABCC11Q96J66 1382 aa18.8■□□□□ 0.6
ATF3-208ENST00000465155 PIK3R4Q99570 1358 aa18.8■□□□□ 0.6
ATF3-208ENST00000465155 QRICH2Q9H0J4 1663 aa18.8■□□□□ 0.6
ATF3-208ENST00000465155 DLC1Q96QB1 1528 aa18.79■□□□□ 0.6
ATF3-208ENST00000465155 CPS1P31327 1500 aa18.79■□□□□ 0.6
ATF3-208ENST00000465155 XRN1Q8IZH2 1706 aaKnown RBP18.78■□□□□ 0.6
ATF3-208ENST00000465155 CENPJQ9HC77 1338 aaPredicted RBP18.78■□□□□ 0.6
ATF3-208ENST00000465155 AMOTL2Q9Y2J4 779 aa18.78■□□□□ 0.6
ATF3-208ENST00000465155 TECPR2O15040 1411 aa18.77■□□□□ 0.6
ATF3-208ENST00000465155 PRAM1Q96QH2 718 aa18.76■□□□□ 0.59
ATF3-208ENST00000465155 TESK2Q96S53 571 aa18.75■□□□□ 0.59
ATF3-208ENST00000465155 POGKQ9P215 609 aa18.75■□□□□ 0.59
ATF3-208ENST00000465155 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
ATF3-208ENST00000465155 ROBO2Q9HCK4 1378 aa18.74■□□□□ 0.59
ATF3-208ENST00000465155 FAM135BQ49AJ0 1406 aa18.74■□□□□ 0.59
ATF3-208ENST00000465155 WAPLQ7Z5K2 1190 aa18.74■□□□□ 0.59
ATF3-208ENST00000465155 PTCH1Q13635 1447 aa18.73■□□□□ 0.59
ATF3-208ENST00000465155 KCNA6P17658 529 aa18.73■□□□□ 0.59
ATF3-208ENST00000465155 SIRT1Q96EB6 747 aa18.73■□□□□ 0.59
ATF3-208ENST00000465155 PLEKHH1Q9ULM0 1364 aa18.73■□□□□ 0.59
ATF3-208ENST00000465155 NWD1Q149M9 1564 aa18.72■□□□□ 0.59
ATF3-208ENST00000465155 C11orf95C9JLR9 678 aaPredicted RBP18.71■□□□□ 0.59
ATF3-208ENST00000465155 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
ATF3-208ENST00000465155 SBNO2Q9Y2G9 1366 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms