RNA–Protein interactions for RNA: ENST00000462944.1

MDH1-209, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-209ENST00000462944 JCADQ9P266 1359 aa14.34□□□□□ -0.11
MDH1-209ENST00000462944 NCOA3Q9Y6Q9 1424 aa14.33□□□□□ -0.11
MDH1-209ENST00000462944 RPRD2Q5VT52 1461 aaKnown RBP14.32□□□□□ -0.12
MDH1-209ENST00000462944 SLC52A1Q9NWF4 448 aa14.32□□□□□ -0.12
MDH1-209ENST00000462944 SHPRHQ149N8 1683 aa14.32□□□□□ -0.12
MDH1-209ENST00000462944 NOS1P29475 1434 aa14.32□□□□□ -0.12
MDH1-209ENST00000462944 FGD6Q6ZV73 1430 aa14.32□□□□□ -0.12
MDH1-209ENST00000462944 COL16A1Q07092 1604 aaPredicted RBP14.31□□□□□ -0.12
MDH1-209ENST00000462944 HDGFP51858 240 aaKnown RBP14.31□□□□□ -0.12
MDH1-209ENST00000462944 IDI1Q13907 227 aa14.3□□□□□ -0.12
MDH1-209ENST00000462944 ABCC5O15440 1437 aa14.3□□□□□ -0.12
MDH1-209ENST00000462944 GCC2Q8IWJ2 1684 aa14.3□□□□□ -0.12
MDH1-209ENST00000462944 SLAIN2Q9P270 581 aa14.29□□□□□ -0.12
MDH1-209ENST00000462944 SPATA31A6Q5VVP1 1343 aa14.29□□□□□ -0.12
MDH1-209ENST00000462944 ANKRD30AQ9BXX3 1397 aa14.29□□□□□ -0.12
MDH1-209ENST00000462944 DAPK1P53355 1430 aa14.29□□□□□ -0.12
MDH1-209ENST00000462944 DIP2AQ14689 1571 aa14.28□□□□□ -0.12
MDH1-209ENST00000462944 AHDC1Q5TGY3 1603 aaPredicted RBP14.27□□□□□ -0.12
MDH1-209ENST00000462944 PLEKHG1Q9ULL1 1385 aa14.27□□□□□ -0.12
MDH1-209ENST00000462944 CACNB1Q02641 598 aaPredicted RBP14.27□□□□□ -0.13
MDH1-209ENST00000462944 ZNF772Q68DY9 489 aaPredicted RBP14.27□□□□□ -0.13
MDH1-209ENST00000462944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.27□□□□□ -0.13
MDH1-209ENST00000462944 RRP7BPQ9NSQ0 103 aa14.27□□□□□ -0.13
MDH1-209ENST00000462944 LOC105371045A0A1W2PR82 267 aa14.26□□□□□ -0.13
MDH1-209ENST00000462944 SLC26A8Q96RN1 970 aa14.26□□□□□ -0.13
MDH1-209ENST00000462944 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.26□□□□□ -0.13
MDH1-209ENST00000462944 TMEM131LA2VDJ0 1609 aa14.25□□□□□ -0.13
MDH1-209ENST00000462944 ZFYVE9O95405 1425 aa14.24□□□□□ -0.13
MDH1-209ENST00000462944 KANK4Q5T7N3 995 aaPredicted RBP14.24□□□□□ -0.13
MDH1-209ENST00000462944 CDK12Q9NYV4 1490 aaPredicted RBP14.24□□□□□ -0.13
MDH1-209ENST00000462944 PIK3R4Q99570 1358 aa14.23□□□□□ -0.13
MDH1-209ENST00000462944 BCANQ96GW7 911 aa14.23□□□□□ -0.13
MDH1-209ENST00000462944 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
MDH1-209ENST00000462944 ADGRL2O95490 1459 aa14.23□□□□□ -0.13
MDH1-209ENST00000462944 CADPS2Q86UW7 1296 aa14.22□□□□□ -0.13
MDH1-209ENST00000462944 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.22□□□□□ -0.13
MDH1-209ENST00000462944 TBX22Q9Y458 520 aa14.22□□□□□ -0.13
MDH1-209ENST00000462944 APLP2Q06481 763 aa14.2□□□□□ -0.14
MDH1-209ENST00000462944 MEX3CQ5U5Q3 659 aaKnown RBP14.2□□□□□ -0.14
MDH1-209ENST00000462944 RIMS2Q9UQ26 1411 aa14.2□□□□□ -0.14
MDH1-209ENST00000462944 DCCP43146 1447 aa14.19□□□□□ -0.14
MDH1-209ENST00000462944 PPP1R15AO75807 674 aaPredicted RBP14.19□□□□□ -0.14
MDH1-209ENST00000462944 C19orf44Q9H6X5 657 aa14.19□□□□□ -0.14
MDH1-209ENST00000462944 TRPM2O94759 1503 aa14.19□□□□□ -0.14
MDH1-209ENST00000462944 LRP6O75581 1613 aa14.19□□□□□ -0.14
MDH1-209ENST00000462944 UPF1Q92900 1129 aaKnown RBP eCLIP14.18□□□□□ -0.14
MDH1-209ENST00000462944 UNC13BO14795 1591 aa14.17□□□□□ -0.14
MDH1-209ENST00000462944 NHSL1Q5SYE7 1610 aa14.17□□□□□ -0.14
MDH1-209ENST00000462944 ATF3P18847 181 aa14.17□□□□□ -0.14
MDH1-209ENST00000462944 RBM33Q96EV2 1170 aaKnown RBP14.17□□□□□ -0.14
MDH1-209ENST00000462944 C14orf37Q86TY3 774 aa14.16□□□□□ -0.14
MDH1-209ENST00000462944 E9PCH4 1651 aa14.16□□□□□ -0.14
MDH1-209ENST00000462944 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
MDH1-209ENST00000462944 RXRBP28702 533 aa14.15□□□□□ -0.14
MDH1-209ENST00000462944 IQGAP3Q86VI3 1631 aa14.14□□□□□ -0.15
MDH1-209ENST00000462944 ADAMTS13Q76LX8 1427 aa14.14□□□□□ -0.15
MDH1-209ENST00000462944 XRN1Q8IZH2 1706 aaKnown RBP14.13□□□□□ -0.15
MDH1-209ENST00000462944 SETD5Q9C0A6 1442 aa14.13□□□□□ -0.15
MDH1-209ENST00000462944 CHIC2Q9UKJ5 165 aa14.12□□□□□ -0.15
MDH1-209ENST00000462944 TRIM52Q96A61 297 aa14.11□□□□□ -0.15
MDH1-209ENST00000462944 ASXL1Q8IXJ9 1541 aa14.1□□□□□ -0.15
MDH1-209ENST00000462944 SETBP1Q9Y6X0 1596 aa14.09□□□□□ -0.15
MDH1-209ENST00000462944 LAMC1P11047 1609 aa14.08□□□□□ -0.15
MDH1-209ENST00000462944 SPHKAPQ2M3C7 1700 aa14.08□□□□□ -0.16
MDH1-209ENST00000462944 BRINP3Q76B58 766 aa14.08□□□□□ -0.16
MDH1-209ENST00000462944 LRRC59Q96AG4 307 aaKnown RBP14.08□□□□□ -0.16
MDH1-209ENST00000462944 RNF39Q9H2S5 420 aa14.07□□□□□ -0.16
MDH1-209ENST00000462944 NRXN3Q9Y4C0 1643 aa14.07□□□□□ -0.16
MDH1-209ENST00000462944 AMOTL2Q9Y2J4 779 aa14.06□□□□□ -0.16
MDH1-209ENST00000462944 AFF2P51816 1311 aa14.06□□□□□ -0.16
MDH1-209ENST00000462944 MST1RQ04912 1400 aa14.06□□□□□ -0.16
MDH1-209ENST00000462944 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
MDH1-209ENST00000462944 RBM6P78332 1123 aaKnown RBP14.05□□□□□ -0.16
MDH1-209ENST00000462944 KIF1BO60333 1816 aa14.05□□□□□ -0.16
MDH1-209ENST00000462944 ROCK1Q13464 1354 aa14.05□□□□□ -0.16
MDH1-209ENST00000462944 NALCNQ8IZF0 1738 aa14.04□□□□□ -0.16
MDH1-209ENST00000462944 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
MDH1-209ENST00000462944 NUTM2BA6NNL0 878 aaPredicted RBP14.03□□□□□ -0.16
MDH1-209ENST00000462944 NUTM2EB1AL46 878 aaPredicted RBP14.03□□□□□ -0.16
MDH1-209ENST00000462944 NUTM2AQ8IVF1 878 aaPredicted RBP14.03□□□□□ -0.16
MDH1-209ENST00000462944 NGLY1Q96IV0 654 aa14.03□□□□□ -0.16
MDH1-209ENST00000462944 PTPRUQ92729 1446 aa14.03□□□□□ -0.16
MDH1-209ENST00000462944 MARF1Q9Y4F3 1742 aaKnown RBP14.02□□□□□ -0.16
MDH1-209ENST00000462944 RGS12O14924 1447 aa14.02□□□□□ -0.16
MDH1-209ENST00000462944 ADGRL3Q9HAR2 1447 aa14.02□□□□□ -0.16
MDH1-209ENST00000462944 FAM50AQ14320 339 aaKnown RBP14.01□□□□□ -0.17
MDH1-209ENST00000462944 ATAD2Q6PL18 1390 aa14□□□□□ -0.17
MDH1-209ENST00000462944 PNPLA6Q8IY17 1366 aa14□□□□□ -0.17
MDH1-209ENST00000462944 QTRT2Q9H974 415 aaKnown RBP14□□□□□ -0.17
MDH1-209ENST00000462944 COL22A1Q8NFW1 1626 aaPredicted RBP13.99□□□□□ -0.17
MDH1-209ENST00000462944 C8orf37Q96NL8 207 aa13.98□□□□□ -0.17
MDH1-209ENST00000462944 PTCH1Q13635 1447 aa13.98□□□□□ -0.17
MDH1-209ENST00000462944 NUTM2DQ5VT03 806 aaPredicted RBP13.97□□□□□ -0.17
MDH1-209ENST00000462944 CCDC125Q86Z20 511 aa13.96□□□□□ -0.17
MDH1-209ENST00000462944 NUP155O75694 1391 aa13.96□□□□□ -0.18
MDH1-209ENST00000462944 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.95□□□□□ -0.18
MDH1-209ENST00000462944 TRPC5Q9UL62 973 aaPredicted RBP13.95□□□□□ -0.18
MDH1-209ENST00000462944 PRAG1Q86YV5 1406 aa13.95□□□□□ -0.18
MDH1-209ENST00000462944 NEXMIFQ5QGS0 1516 aa13.95□□□□□ -0.18
MDH1-209ENST00000462944 C1orf167Q5SNV9 1468 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms