RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 TMEM134Q9H6X4 195 aa6.61□□□□□ -1.35
CNOT11-203ENST00000462489 WBP1LQ9NX94 342 aa6.61□□□□□ -1.35
CNOT11-203ENST00000462489 LCE2BO14633 110 aa6.6□□□□□ -1.35
CNOT11-203ENST00000462489 CCDC102AQ96A19 550 aa6.6□□□□□ -1.35
CNOT11-203ENST00000462489 SAMD7Q7Z3H4 446 aa6.59□□□□□ -1.35
CNOT11-203ENST00000462489 LRCH3Q96II8 777 aa6.59□□□□□ -1.35
CNOT11-203ENST00000462489 AK7Q96M32 723 aa6.59□□□□□ -1.35
CNOT11-203ENST00000462489 PHOX2BQ99453 314 aa6.59□□□□□ -1.35
CNOT11-203ENST00000462489 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.59□□□□□ -1.35
CNOT11-203ENST00000462489 SLF2Q8IX21 1173 aa6.58□□□□□ -1.36
CNOT11-203ENST00000462489 NECTIN2Q92692 538 aa6.58□□□□□ -1.36
CNOT11-203ENST00000462489 SLC4A3P48751 1232 aa6.57□□□□□ -1.36
CNOT11-203ENST00000462489 AMHR2Q16671 573 aa6.57□□□□□ -1.36
CNOT11-203ENST00000462489 SWT1Q5T5J6 900 aaKnown RBP6.57□□□□□ -1.36
CNOT11-203ENST00000462489 NYAP1Q6ZVC0 841 aa6.57□□□□□ -1.36
CNOT11-203ENST00000462489 DAXXQ9UER7 740 aaPredicted RBP6.57□□□□□ -1.36
CNOT11-203ENST00000462489 TSR3Q9UJK0 312 aaKnown RBP6.57□□□□□ -1.36
CNOT11-203ENST00000462489 HPS5Q9UPZ3 1129 aa6.57□□□□□ -1.36
CNOT11-203ENST00000462489 Q6ZNB5 142 aa6.56□□□□□ -1.36
CNOT11-203ENST00000462489 TMUB1Q9BVT8 246 aa6.56□□□□□ -1.36
CNOT11-203ENST00000462489 TRIM66O15016 1216 aa6.55□□□□□ -1.36
CNOT11-203ENST00000462489 CLCN1P35523 988 aa6.55□□□□□ -1.36
CNOT11-203ENST00000462489 SLC24A3Q9HC58 644 aa6.55□□□□□ -1.36
CNOT11-203ENST00000462489 PPP4CP60510 307 aa6.54□□□□□ -1.36
CNOT11-203ENST00000462489 TPRNQ4KMQ1 711 aa6.54□□□□□ -1.36
CNOT11-203ENST00000462489 RSPH4AQ5TD94 716 aa6.54□□□□□ -1.36
CNOT11-203ENST00000462489 SULF1Q8IWU6 871 aa6.54□□□□□ -1.36
CNOT11-203ENST00000462489 GPCPD1Q9NPB8 672 aa6.54□□□□□ -1.36
CNOT11-203ENST00000462489 KCNC4Q03721 635 aa6.52□□□□□ -1.37
CNOT11-203ENST00000462489 SLC10A3P09131 477 aa6.51□□□□□ -1.37
CNOT11-203ENST00000462489 MDM2Q00987 491 aaPredicted RBP6.51□□□□□ -1.37
CNOT11-203ENST00000462489 PRR14Q9BWN1 585 aa6.51□□□□□ -1.37
CNOT11-203ENST00000462489 PDE4DQ08499 809 aa6.5□□□□□ -1.37
CNOT11-203ENST00000462489 NLRP7Q8WX94 980 aa6.5□□□□□ -1.37
CNOT11-203ENST00000462489 PARP9Q8IXQ6 854 aa6.49□□□□□ -1.37
CNOT11-203ENST00000462489 REPIN1Q9BWE0 567 aaKnown RBP6.49□□□□□ -1.37
CNOT11-203ENST00000462489 FAM217BQ9NTX9 383 aaPredicted RBP6.49□□□□□ -1.37
CNOT11-203ENST00000462489 DDX11L8A8MPP1 907 aa6.48□□□□□ -1.37
CNOT11-203ENST00000462489 RNF40O75150 1001 aa6.48□□□□□ -1.37
CNOT11-203ENST00000462489 CD46P15529 392 aa6.48□□□□□ -1.37
CNOT11-203ENST00000462489 TTLL12Q14166 644 aaPredicted RBP6.48□□□□□ -1.37
CNOT11-203ENST00000462489 TJAP1Q5JTD0 557 aa6.48□□□□□ -1.37
CNOT11-203ENST00000462489 ACTN4O43707 911 aaKnown RBP6.47□□□□□ -1.37
CNOT11-203ENST00000462489 GCGRP47871 477 aa6.47□□□□□ -1.37
CNOT11-203ENST00000462489 APLP1P51693 650 aa6.47□□□□□ -1.37
CNOT11-203ENST00000462489 KMT5BQ4FZB7 885 aa6.47□□□□□ -1.37
CNOT11-203ENST00000462489 GIGYF2Q6Y7W6 1299 aaKnown RBP6.47□□□□□ -1.37
CNOT11-203ENST00000462489 GFRA3O60609 400 aa6.46□□□□□ -1.38
CNOT11-203ENST00000462489 CFHP08603 1231 aa6.46□□□□□ -1.38
CNOT11-203ENST00000462489 SSTR3P32745 418 aaPredicted RBP6.46□□□□□ -1.38
CNOT11-203ENST00000462489 TRAF7Q6Q0C0 670 aa6.46□□□□□ -1.38
CNOT11-203ENST00000462489 RDH13Q8NBN7 331 aa6.46□□□□□ -1.38
CNOT11-203ENST00000462489 MTRQ99707 1265 aa6.46□□□□□ -1.38
CNOT11-203ENST00000462489 PRKCSHP14314 528 aaPredicted RBP6.44□□□□□ -1.38
CNOT11-203ENST00000462489 USP46P62068 366 aa6.44□□□□□ -1.38
CNOT11-203ENST00000462489 ZNF516Q92618 1163 aa6.44□□□□□ -1.38
CNOT11-203ENST00000462489 IL21Q9HBE4 155 aa6.43□□□□□ -1.38
CNOT11-203ENST00000462489 KDM4AO75164 1064 aa6.42□□□□□ -1.38
CNOT11-203ENST00000462489 MS4A1P11836 297 aa6.42□□□□□ -1.38
CNOT11-203ENST00000462489 LAPTM4AQ15012 233 aa6.42□□□□□ -1.38
CNOT11-203ENST00000462489 DIXDC1Q155Q3 683 aa6.42□□□□□ -1.38
CNOT11-203ENST00000462489 GRIPAP1Q4V328 841 aa6.42□□□□□ -1.38
CNOT11-203ENST00000462489 PRKD2Q9BZL6 878 aa6.42□□□□□ -1.38
CNOT11-203ENST00000462489 KDM4CQ9H3R0 1056 aa6.42□□□□□ -1.38
CNOT11-203ENST00000462489 PCDHB3Q9Y5E6 796 aa6.42□□□□□ -1.38
CNOT11-203ENST00000462489 ATP6V1AP38606 617 aa6.41□□□□□ -1.38
CNOT11-203ENST00000462489 PPP1R18Q6NYC8 613 aa6.41□□□□□ -1.38
CNOT11-203ENST00000462489 NKX2-3Q8TAU0 364 aa6.41□□□□□ -1.38
CNOT11-203ENST00000462489 BEGAINQ9BUH8 593 aa6.41□□□□□ -1.38
CNOT11-203ENST00000462489 NR1I2O75469 434 aa6.4□□□□□ -1.38
CNOT11-203ENST00000462489 FUT2Q10981 343 aa6.4□□□□□ -1.38
CNOT11-203ENST00000462489 MORN1Q5T089 497 aa6.4□□□□□ -1.38
CNOT11-203ENST00000462489 NUTM1Q86Y26 1132 aa6.4□□□□□ -1.38
CNOT11-203ENST00000462489 GJA5P36382 358 aa6.39□□□□□ -1.39
CNOT11-203ENST00000462489 BRPF1P55201 1214 aaPredicted RBP6.39□□□□□ -1.39
CNOT11-203ENST00000462489 COPS2P61201 443 aa6.39□□□□□ -1.39
CNOT11-203ENST00000462489 GPBP1L1Q9HC44 474 aaPredicted RBP6.39□□□□□ -1.39
CNOT11-203ENST00000462489 SALL2Q9Y467 1007 aaPredicted RBP6.39□□□□□ -1.39
CNOT11-203ENST00000462489 NRG2O14511 850 aaPredicted RBP6.38□□□□□ -1.39
CNOT11-203ENST00000462489 HOXA2O43364 376 aa6.38□□□□□ -1.39
CNOT11-203ENST00000462489 ZPR1O75312 459 aa6.38□□□□□ -1.39
CNOT11-203ENST00000462489 NEUROD2Q15784 382 aa6.38□□□□□ -1.39
CNOT11-203ENST00000462489 BLOC1S3Q6QNY0 202 aa6.38□□□□□ -1.39
CNOT11-203ENST00000462489 SPIRE2Q8WWL2 714 aa6.38□□□□□ -1.39
CNOT11-203ENST00000462489 DDRGK1Q96HY6 314 aa6.38□□□□□ -1.39
CNOT11-203ENST00000462489 SCUBE3Q8IX30 993 aa6.37□□□□□ -1.39
CNOT11-203ENST00000462489 PUS10Q3MIT2 529 aaKnown RBP6.36□□□□□ -1.39
CNOT11-203ENST00000462489 TBC1D2Q9BYX2 928 aa6.36□□□□□ -1.39
CNOT11-203ENST00000462489 RSPH6AQ9H0K4 717 aa6.36□□□□□ -1.39
CNOT11-203ENST00000462489 SLC27A5Q9Y2P5 690 aa6.36□□□□□ -1.39
CNOT11-203ENST00000462489 TUSC1Q2TAM9 212 aa6.35□□□□□ -1.39
CNOT11-203ENST00000462489 Q3C1V9 767 aa6.35□□□□□ -1.39
CNOT11-203ENST00000462489 THAP11Q96EK4 314 aa6.35□□□□□ -1.39
CNOT11-203ENST00000462489 FAM117AQ9C073 453 aa6.35□□□□□ -1.39
CNOT11-203ENST00000462489 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.35□□□□□ -1.39
CNOT11-203ENST00000462489 V9GY48 417 aaPredicted RBP6.35□□□□□ -1.39
CNOT11-203ENST00000462489 PLEKHG3A1L390 1219 aa6.34□□□□□ -1.39
CNOT11-203ENST00000462489 SPTLC1O15269 473 aa6.34□□□□□ -1.39
CNOT11-203ENST00000462489 BRICD5Q6PL45 260 aa6.34□□□□□ -1.39
CNOT11-203ENST00000462489 GOPCQ9HD26 462 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms