RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 HNRNPUQ00839 825 aaKnown RBP eCLIP5.57□□□□□ -1.52
ATP13A3-206ENST00000461660 LMTK2Q8IWU2 1503 aa5.57□□□□□ -1.52
ATP13A3-206ENST00000461660 ZMYM4Q5VZL5 1548 aa5.57□□□□□ -1.52
ATP13A3-206ENST00000461660 ZMYM3Q14202 1370 aa5.57□□□□□ -1.52
ATP13A3-206ENST00000461660 KTN1Q86UP2 1357 aaKnown RBP5.57□□□□□ -1.52
ATP13A3-206ENST00000461660 C11orf95C9JLR9 678 aaPredicted RBP5.57□□□□□ -1.52
ATP13A3-206ENST00000461660 ARHGAP31Q2M1Z3 1444 aa5.57□□□□□ -1.52
ATP13A3-206ENST00000461660 SCAF11Q99590 1463 aaKnown RBP5.57□□□□□ -1.52
ATP13A3-206ENST00000461660 CC2D1BQ5T0F9 858 aaKnown RBP5.56□□□□□ -1.52
ATP13A3-206ENST00000461660 PRKRIP1Q9H875 184 aaPredicted RBP5.56□□□□□ -1.52
ATP13A3-206ENST00000461660 FRMPD1Q5SYB0 1578 aa5.56□□□□□ -1.52
ATP13A3-206ENST00000461660 UGGT1Q9NYU2 1555 aa5.56□□□□□ -1.52
ATP13A3-206ENST00000461660 CEBPAP49715 358 aaPredicted RBP5.56□□□□□ -1.52
ATP13A3-206ENST00000461660 RALBP1Q15311 655 aa5.56□□□□□ -1.52
ATP13A3-206ENST00000461660 C14orf93Q9H972 538 aaKnown RBP5.56□□□□□ -1.52
ATP13A3-206ENST00000461660 PANK3Q9H999 370 aa5.56□□□□□ -1.52
ATP13A3-206ENST00000461660 EVC2Q86UK5 1308 aa5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 GPRASP1Q5JY77 1395 aa5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 RNF17Q9BXT8 1623 aaKnown RBP5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 E9PCH4 1651 aa5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 COL17A1Q9UMD9 1497 aaPredicted RBP5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 AGLP35573 1532 aa5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 TXNDC2Q86VQ3 553 aa5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 THEMISQ8N1K5 641 aaPredicted RBP5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 DEPDC5O75140 1603 aa5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 ARHGEF40Q8TER5 1519 aa5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 VWDEQ8N2E2 1590 aa5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 RICTORQ6R327 1708 aa5.55□□□□□ -1.52
ATP13A3-206ENST00000461660 SPHKAPQ2M3C7 1700 aa5.54□□□□□ -1.52
ATP13A3-206ENST00000461660 ERVK-7P63135 1459 aa5.54□□□□□ -1.52
ATP13A3-206ENST00000461660 CLTCL1P53675 1640 aa5.54□□□□□ -1.52
ATP13A3-206ENST00000461660 PPRC1Q5VV67 1664 aaKnown RBP5.54□□□□□ -1.52
ATP13A3-206ENST00000461660 MINK1Q8N4C8 1332 aaPredicted RBP5.54□□□□□ -1.52
ATP13A3-206ENST00000461660 WDR43Q15061 677 aaKnown RBP eCLIP5.54□□□□□ -1.52
ATP13A3-206ENST00000461660 PELP1Q8IZL8 1130 aaKnown RBP5.54□□□□□ -1.52
ATP13A3-206ENST00000461660 CEP152O94986 1710 aa5.54□□□□□ -1.52
ATP13A3-206ENST00000461660 MYOM2P54296 1465 aa5.53□□□□□ -1.52
ATP13A3-206ENST00000461660 CFAP65Q6ZU64 1925 aaKnown RBP5.53□□□□□ -1.52
ATP13A3-206ENST00000461660 C14orf37Q86TY3 774 aa5.53□□□□□ -1.52
ATP13A3-206ENST00000461660 RIMS2Q9UQ26 1411 aa5.53□□□□□ -1.52
ATP13A3-206ENST00000461660 MROH1Q8NDA8 1641 aa5.53□□□□□ -1.52
ATP13A3-206ENST00000461660 PRAM1Q96QH2 718 aa5.53□□□□□ -1.52
ATP13A3-206ENST00000461660 HDGFL2Q7Z4V5 671 aaPredicted RBP5.53□□□□□ -1.52
ATP13A3-206ENST00000461660 NLRP13Q86W25 1043 aa5.53□□□□□ -1.52
ATP13A3-206ENST00000461660 TERF2IPQ9NYB0 399 aa5.53□□□□□ -1.52
ATP13A3-206ENST00000461660 TESK2Q96S53 571 aa5.52□□□□□ -1.53
ATP13A3-206ENST00000461660 CAMSAP1Q5T5Y3 1602 aa5.52□□□□□ -1.53
ATP13A3-206ENST00000461660 DISP3Q9P2K9 1392 aa5.52□□□□□ -1.53
ATP13A3-206ENST00000461660 MYBBP1AQ9BQG0 1328 aaKnown RBP5.52□□□□□ -1.53
ATP13A3-206ENST00000461660 MORC1Q86VD1 984 aa5.52□□□□□ -1.53
ATP13A3-206ENST00000461660 ZC3H13Q5T200 1668 aaKnown RBP5.51□□□□□ -1.53
ATP13A3-206ENST00000461660 KIF1BO60333 1816 aa5.51□□□□□ -1.53
ATP13A3-206ENST00000461660 ADGRB3O60242 1522 aa5.51□□□□□ -1.53
ATP13A3-206ENST00000461660 CFAP53Q96M91 514 aa5.51□□□□□ -1.53
ATP13A3-206ENST00000461660 GTF3C3Q9Y5Q9 886 aa5.51□□□□□ -1.53
ATP13A3-206ENST00000461660 REREQ9P2R6 1566 aa5.51□□□□□ -1.53
ATP13A3-206ENST00000461660 SLC26A8Q96RN1 970 aa5.51□□□□□ -1.53
ATP13A3-206ENST00000461660 TNNT2P45379 298 aaPredicted RBP5.51□□□□□ -1.53
ATP13A3-206ENST00000461660 ANKLE2Q86XL3 938 aa5.51□□□□□ -1.53
ATP13A3-206ENST00000461660 CABP2Q9NPB3 220 aa5.51□□□□□ -1.53
ATP13A3-206ENST00000461660 PIK3C2GO75747 1445 aa5.5□□□□□ -1.53
ATP13A3-206ENST00000461660 NEFMP07197 916 aa5.5□□□□□ -1.53
ATP13A3-206ENST00000461660 CGNL1Q0VF96 1302 aa5.5□□□□□ -1.53
ATP13A3-206ENST00000461660 SALL2Q9Y467 1007 aaPredicted RBP5.49□□□□□ -1.53
ATP13A3-206ENST00000461660 ATAD2Q6PL18 1390 aa5.49□□□□□ -1.53
ATP13A3-206ENST00000461660 TMEM2Q9UHN6 1383 aa5.49□□□□□ -1.53
ATP13A3-206ENST00000461660 KIF13AQ9H1H9 1805 aa5.49□□□□□ -1.53
ATP13A3-206ENST00000461660 SLC12A5Q9H2X9 1139 aa5.49□□□□□ -1.53
ATP13A3-206ENST00000461660 ZFYVE9O95405 1425 aa5.49□□□□□ -1.53
ATP13A3-206ENST00000461660 TRPM1Q7Z4N2 1603 aa5.49□□□□□ -1.53
ATP13A3-206ENST00000461660 MADDQ8WXG6 1647 aa5.49□□□□□ -1.53
ATP13A3-206ENST00000461660 NLRP1Q9C000 1473 aa5.49□□□□□ -1.53
ATP13A3-206ENST00000461660 CLTCQ00610 1675 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 YTHDC2Q9H6S0 1430 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 A2ML1A8K2U0 1454 aa5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 BRD4O60885 1362 aaPredicted RBP5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 NUTM2FA1L443 756 aa5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 WAPLQ7Z5K2 1190 aa5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 CDK19Q9BWU1 502 aa5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 NEURL4Q96JN8 1562 aa5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 BCORL1Q5H9F3 1711 aa5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 LRPPRCP42704 1394 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 SBNO2Q9Y2G9 1366 aa5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 SYNMO15061 1565 aa5.48□□□□□ -1.53
ATP13A3-206ENST00000461660 NUDCQ9Y266 331 aa5.47□□□□□ -1.53
ATP13A3-206ENST00000461660 PPM1GO15355 546 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-206ENST00000461660 SENP3-EIF4A1A0A087X0R7 540 aa5.47□□□□□ -1.53
ATP13A3-206ENST00000461660 NGDNQ8NEJ9 315 aaKnown RBP5.47□□□□□ -1.53
ATP13A3-206ENST00000461660 PUS7Q96PZ0 661 aaKnown RBP5.47□□□□□ -1.53
ATP13A3-206ENST00000461660 PREX1Q8TCU6 1659 aa5.47□□□□□ -1.53
ATP13A3-206ENST00000461660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.46□□□□□ -1.54
ATP13A3-206ENST00000461660 AMOTL2Q9Y2J4 779 aa5.46□□□□□ -1.54
ATP13A3-206ENST00000461660 SPATA31D1Q6ZQQ2 1576 aa5.46□□□□□ -1.54
ATP13A3-206ENST00000461660 NINLQ9Y2I6 1382 aa5.46□□□□□ -1.54
ATP13A3-206ENST00000461660 NSD3Q9BZ95 1437 aa5.46□□□□□ -1.54
ATP13A3-206ENST00000461660 CCDC184Q52MB2 194 aa5.46□□□□□ -1.54
ATP13A3-206ENST00000461660 CABP1Q9NZU7 370 aa5.46□□□□□ -1.54
ATP13A3-206ENST00000461660 TBX22Q9Y458 520 aa5.46□□□□□ -1.54
ATP13A3-206ENST00000461660 LAMC1P11047 1609 aa5.46□□□□□ -1.54
ATP13A3-206ENST00000461660 NEXMIFQ5QGS0 1516 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms