RNA–Protein interactions for RNA: ENST00000461283.5

RBM39-221, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 2,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-221ENST00000461283 DSG2Q14126 1118 aa4.6□□□□□ -1.67
RBM39-221ENST00000461283 ZNF579Q8NAF0 562 aaKnown RBP4.6□□□□□ -1.67
RBM39-221ENST00000461283 KIF12Q96FN5 646 aa4.6□□□□□ -1.67
RBM39-221ENST00000461283 CALR3Q96L12 384 aaKnown RBP4.6□□□□□ -1.67
RBM39-221ENST00000461283 GOPCQ9HD26 462 aa4.6□□□□□ -1.67
RBM39-221ENST00000461283 PCF11O94913 1555 aaKnown RBP4.59□□□□□ -1.67
RBM39-221ENST00000461283 MDM2Q00987 491 aaPredicted RBP4.59□□□□□ -1.67
RBM39-221ENST00000461283 PDIA6Q15084 440 aa4.59□□□□□ -1.67
RBM39-221ENST00000461283 GLI2P10070 1586 aa4.59□□□□□ -1.67
RBM39-221ENST00000461283 NUP160Q12769 1436 aa4.59□□□□□ -1.68
RBM39-221ENST00000461283 PAK3O75914 559 aaPredicted RBP4.58□□□□□ -1.68
RBM39-221ENST00000461283 FAM177A1Q8N128 213 aaPredicted RBP4.58□□□□□ -1.68
RBM39-221ENST00000461283 GLMNQ92990 594 aa4.58□□□□□ -1.68
RBM39-221ENST00000461283 IVNS1ABPQ9Y6Y0 642 aa4.58□□□□□ -1.68
RBM39-221ENST00000461283 AQRO60306 1485 aaKnown RBP eCLIP4.58□□□□□ -1.682e-10■■■■□ 21.9
RBM39-221ENST00000461283 ABCA5Q8WWZ7 1642 aa4.58□□□□□ -1.68
RBM39-221ENST00000461283 ABCA10Q8WWZ4 1543 aa4.58□□□□□ -1.68
RBM39-221ENST00000461283 OSBPP22059 807 aa4.57□□□□□ -1.68
RBM39-221ENST00000461283 ABL2P42684 1182 aa4.57□□□□□ -1.68
RBM39-221ENST00000461283 CDCA8Q53HL2 280 aa4.57□□□□□ -1.68
RBM39-221ENST00000461283 PHF12Q96QT6 1004 aa4.57□□□□□ -1.68
RBM39-221ENST00000461283 BEGAINQ9BUH8 593 aa4.57□□□□□ -1.68
RBM39-221ENST00000461283 CCDC88BA6NC98 1476 aa4.57□□□□□ -1.68
RBM39-221ENST00000461283 CD44P16070 742 aaKnown RBP4.57□□□□□ -1.68
RBM39-221ENST00000461283 CCDC27Q2M243 656 aa4.57□□□□□ -1.68
RBM39-221ENST00000461283 ZRANB1Q9UGI0 708 aa4.57□□□□□ -1.68
RBM39-221ENST00000461283 CEP170Q5SW79 1584 aa4.57□□□□□ -1.68
RBM39-221ENST00000461283 DIP2BQ9P265 1576 aa4.57□□□□□ -1.68
RBM39-221ENST00000461283 SOX12O15370 315 aa4.56□□□□□ -1.68
RBM39-221ENST00000461283 SH3D19Q5HYK7 790 aa4.56□□□□□ -1.68
RBM39-221ENST00000461283 UPF1Q92900 1129 aaKnown RBP eCLIP4.56□□□□□ -1.68
RBM39-221ENST00000461283 YTHDC1Q96MU7 727 aaKnown RBP4.56□□□□□ -1.68
RBM39-221ENST00000461283 ERICH3Q5RHP9 1530 aa4.56□□□□□ -1.68
RBM39-221ENST00000461283 KIAA0586Q9BVV6 1533 aa4.56□□□□□ -1.68
RBM39-221ENST00000461283 GRIN2AQ12879 1464 aa4.56□□□□□ -1.68
RBM39-221ENST00000461283 DHX37Q8IY37 1157 aaKnown RBP4.56□□□□□ -1.68
RBM39-221ENST00000461283 FHAD1B1AJZ9 1412 aa4.55□□□□□ -1.68
RBM39-221ENST00000461283 PUS7Q96PZ0 661 aaKnown RBP4.55□□□□□ -1.68
RBM39-221ENST00000461283 TBC1D2BQ9UPU7 963 aa4.55□□□□□ -1.68
RBM39-221ENST00000461283 TRPC6Q9Y210 931 aa4.55□□□□□ -1.68
RBM39-221ENST00000461283 ADAMTS12P58397 1594 aa4.55□□□□□ -1.68
RBM39-221ENST00000461283 TEX14Q8IWB6 1497 aa4.55□□□□□ -1.68
RBM39-221ENST00000461283 SSTR3P32745 418 aaPredicted RBP4.55□□□□□ -1.68
RBM39-221ENST00000461283 MTMR14Q8NCE2 650 aa4.55□□□□□ -1.68
RBM39-221ENST00000461283 ADAMTS19Q8TE59 1207 aa4.55□□□□□ -1.68
RBM39-221ENST00000461283 GPHNQ9NQX3 736 aaPredicted RBP4.55□□□□□ -1.68
RBM39-221ENST00000461283 FGD5Q6ZNL6 1462 aa4.54□□□□□ -1.68
RBM39-221ENST00000461283 HIC1Q14526 733 aa4.54□□□□□ -1.68
RBM39-221ENST00000461283 CSPP1Q1MSJ5 1256 aa4.54□□□□□ -1.68
RBM39-221ENST00000461283 SKIV2LQ15477 1246 aaKnown RBP4.54□□□□□ -1.68
RBM39-221ENST00000461283 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.54□□□□□ -1.68
RBM39-221ENST00000461283 SUPT16HQ9Y5B9 1047 aaKnown RBP4.54□□□□□ -1.68
RBM39-221ENST00000461283 RFC5P40937 340 aa4.53□□□□□ -1.68
RBM39-221ENST00000461283 MYSM1Q5VVJ2 828 aa4.53□□□□□ -1.68
RBM39-221ENST00000461283 DPY19L2Q6NUT2 758 aa4.53□□□□□ -1.68
RBM39-221ENST00000461283 CDHR5Q9HBB8 845 aa4.53□□□□□ -1.68
RBM39-221ENST00000461283 PLB1Q6P1J6 1458 aa4.53□□□□□ -1.68
RBM39-221ENST00000461283 PTGDRQ13258 359 aa4.53□□□□□ -1.68
RBM39-221ENST00000461283 PPM1GO15355 546 aaPredicted RBP4.52□□□□□ -1.69
RBM39-221ENST00000461283 FCHSD2O94868 740 aa4.52□□□□□ -1.69
RBM39-221ENST00000461283 CCER1Q8TC90 406 aaPredicted RBP4.52□□□□□ -1.69
RBM39-221ENST00000461283 MS4A3Q96HJ5 214 aa4.52□□□□□ -1.69
RBM39-221ENST00000461283 POLR3GLQ9BT43 218 aa4.52□□□□□ -1.69
RBM39-221ENST00000461283 KIAA1522Q9P206 1035 aaPredicted RBP4.52□□□□□ -1.69
RBM39-221ENST00000461283 SPDYE5A6NIY4 337 aa4.52□□□□□ -1.69
RBM39-221ENST00000461283 HDGFL1Q5TGJ6 251 aa4.52□□□□□ -1.69
RBM39-221ENST00000461283 SP7Q8TDD2 431 aaPredicted RBP4.52□□□□□ -1.69
RBM39-221ENST00000461283 LIMD1Q9UGP4 676 aa4.52□□□□□ -1.69
RBM39-221ENST00000461283 PHLDB1Q86UU1 1377 aa4.51□□□□□ -1.69
RBM39-221ENST00000461283 UHRF1BP1LA0JNW5 1464 aa4.51□□□□□ -1.69
RBM39-221ENST00000461283 CLSPNQ9HAW4 1339 aa4.51□□□□□ -1.69
RBM39-221ENST00000461283 TBC1D12O60347 775 aa4.51□□□□□ -1.69
RBM39-221ENST00000461283 BRD1O95696 1058 aa4.51□□□□□ -1.69
RBM39-221ENST00000461283 TMEM106CQ9BVX2 250 aa4.51□□□□□ -1.69
RBM39-221ENST00000461283 PPP1R1BQ9UD71 204 aaPredicted RBP4.51□□□□□ -1.69
RBM39-221ENST00000461283 SMARCA5O60264 1052 aaPredicted RBP4.5□□□□□ -1.69
RBM39-221ENST00000461283 HMGB1P09429 215 aaKnown RBP4.5□□□□□ -1.69
RBM39-221ENST00000461283 SCNN1AP37088 669 aa4.5□□□□□ -1.69
RBM39-221ENST00000461283 MAP3K9P80192 1104 aa4.5□□□□□ -1.69
RBM39-221ENST00000461283 CFAP70Q5T0N1 1121 aa4.5□□□□□ -1.69
RBM39-221ENST00000461283 GPCPD1Q9NPB8 672 aa4.5□□□□□ -1.69
RBM39-221ENST00000461283 TDRD9Q8NDG6 1382 aaKnown RBP4.5□□□□□ -1.69
RBM39-221ENST00000461283 RAD54L2Q9Y4B4 1467 aa4.5□□□□□ -1.69
RBM39-221ENST00000461283 BIVM-ERCC5R4GMW8 1640 aa4.5□□□□□ -1.69
RBM39-221ENST00000461283 SPDYE16A6NNV3 312 aaPredicted RBP4.5□□□□□ -1.69
RBM39-221ENST00000461283 QPCTQ16769 361 aa4.5□□□□□ -1.69
RBM39-221ENST00000461283 SND1Q7KZF4 910 aaKnown RBP eCLIP4.5□□□□□ -1.69
RBM39-221ENST00000461283 PBXIP1Q96AQ6 731 aa4.5□□□□□ -1.69
RBM39-221ENST00000461283 MRRFQ96E11 262 aaKnown RBP4.5□□□□□ -1.69
RBM39-221ENST00000461283 WRNQ14191 1432 aaPredicted RBP eCLIP4.49□□□□□ -1.69
RBM39-221ENST00000461283 CUX1P39880 1505 aa4.49□□□□□ -1.69
RBM39-221ENST00000461283 PPP1R15AO75807 674 aaPredicted RBP4.49□□□□□ -1.69
RBM39-221ENST00000461283 CLK2P49760 499 aaKnown RBP4.49□□□□□ -1.69
RBM39-221ENST00000461283 PLPP6Q8IY26 295 aa4.49□□□□□ -1.69
RBM39-221ENST00000461283 C19orf67A6NJJ6 358 aa4.48□□□□□ -1.69
RBM39-221ENST00000461283 GOLGA2Q08379 1002 aa4.48□□□□□ -1.69
RBM39-221ENST00000461283 TMUB1Q9BVT8 246 aa4.48□□□□□ -1.69
RBM39-221ENST00000461283 ANO8Q9HCE9 1232 aaPredicted RBP4.48□□□□□ -1.69
RBM39-221ENST00000461283 PTPRTO14522 1441 aa4.48□□□□□ -1.69
RBM39-221ENST00000461283 MAP3K4Q9Y6R4 1608 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms