RNA–Protein interactions for RNA: ENST00000460424.5

ACAA1-212, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 4

Gene ACAA1, Length 538 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-212ENST00000460424 SLC4A1APQ9BWU0 796 aaKnown RBP34.53■■■■□ 3.12
ACAA1-212ENST00000460424 SETD5Q9C0A6 1442 aa34.53■■■■□ 3.12
ACAA1-212ENST00000460424 PPP1R15AO75807 674 aaPredicted RBP34.46■■■■□ 3.11
ACAA1-212ENST00000460424 HDGFP51858 240 aaKnown RBP34.44■■■■□ 3.1
ACAA1-212ENST00000460424 PLEKHG1Q9ULL1 1385 aa34.43■■■■□ 3.1
ACAA1-212ENST00000460424 RAB3GAP2Q9H2M9 1393 aa34.41■■■■□ 3.1
ACAA1-212ENST00000460424 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.41■■■■□ 3.1
ACAA1-212ENST00000460424 BCANQ96GW7 911 aa34.41■■■■□ 3.1
ACAA1-212ENST00000460424 ACIN1Q9UKV3 1341 aaKnown RBP34.4■■■■□ 3.1
ACAA1-212ENST00000460424 SLC26A8Q96RN1 970 aa34.38■■■■□ 3.09
ACAA1-212ENST00000460424 SENP3Q9H4L4 574 aaPredicted RBP34.37■■■■□ 3.09
ACAA1-212ENST00000460424 LRRC7Q96NW7 1537 aa34.36■■■■□ 3.09
ACAA1-212ENST00000460424 NUTM2DQ5VT03 806 aaPredicted RBP34.36■■■■□ 3.09
ACAA1-212ENST00000460424 MPHOSPH9Q99550 1183 aa34.36■■■■□ 3.09
ACAA1-212ENST00000460424 FOXD1Q16676 465 aa34.35■■■■□ 3.09
ACAA1-212ENST00000460424 DIP2AQ14689 1571 aa34.34■■■■□ 3.09
ACAA1-212ENST00000460424 NWD1Q149M9 1564 aa34.34■■■■□ 3.09
ACAA1-212ENST00000460424 ZNF326Q5BKZ1 582 aaKnown RBP34.34■■■■□ 3.09
ACAA1-212ENST00000460424 XIRP1Q702N8 1843 aaKnown RBP34.34■■■■□ 3.09
ACAA1-212ENST00000460424 NEXMIFQ5QGS0 1516 aa34.34■■■■□ 3.09
ACAA1-212ENST00000460424 CHD2O14647 1828 aaKnown RBP34.32■■■■□ 3.09
ACAA1-212ENST00000460424 UBAP1LF5GYI3 381 aa34.29■■■■□ 3.08
ACAA1-212ENST00000460424 NRXN3Q9Y4C0 1643 aa34.28■■■■□ 3.08
ACAA1-212ENST00000460424 CCDC144AA2RUR9 1427 aa34.27■■■■□ 3.08
ACAA1-212ENST00000460424 ADAMTS13Q76LX8 1427 aa34.27■■■■□ 3.08
ACAA1-212ENST00000460424 SETBP1Q9Y6X0 1596 aa34.26■■■■□ 3.07
ACAA1-212ENST00000460424 NKTRP30414 1462 aaKnown RBP34.26■■■■□ 3.07
ACAA1-212ENST00000460424 PPLO60437 1756 aa34.26■■■■□ 3.07
ACAA1-212ENST00000460424 KCNA6P17658 529 aa34.24■■■■□ 3.07
ACAA1-212ENST00000460424 TBX22Q9Y458 520 aa34.2■■■■□ 3.07
ACAA1-212ENST00000460424 ALKQ9UM73 1620 aa34.17■■■■□ 3.06
ACAA1-212ENST00000460424 IFT172Q9UG01 1749 aa34.16■■■■□ 3.06
ACAA1-212ENST00000460424 TOM1O60784 492 aa34.16■■■■□ 3.06
ACAA1-212ENST00000460424 PIK3R4Q99570 1358 aa34.14■■■■□ 3.06
ACAA1-212ENST00000460424 TMEM94Q12767 1356 aa34.13■■■■□ 3.05
ACAA1-212ENST00000460424 HRCP23327 699 aa34.13■■■■□ 3.05
ACAA1-212ENST00000460424 RPGRIP1LQ68CZ1 1315 aa34.11■■■■□ 3.05
ACAA1-212ENST00000460424 SCAF1Q9H7N4 1312 aaKnown RBP34.11■■■■□ 3.05
ACAA1-212ENST00000460424 PROSER2Q86WR7 435 aaPredicted RBP34.11■■■■□ 3.05
ACAA1-212ENST00000460424 SPATA31E1Q6ZUB1 1445 aa34.11■■■■□ 3.05
ACAA1-212ENST00000460424 SETD1AO15047 1707 aaKnown RBP34.1■■■■□ 3.05
ACAA1-212ENST00000460424 XRN1Q8IZH2 1706 aaKnown RBP34.1■■■■□ 3.05
ACAA1-212ENST00000460424 PIP4K2BP78356 416 aa34.09■■■■□ 3.05
ACAA1-212ENST00000460424 VGFO15240 615 aaPredicted RBP34.07■■■■□ 3.04
ACAA1-212ENST00000460424 PTPRUQ92729 1446 aa34.05■■■■□ 3.04
ACAA1-212ENST00000460424 RBM33Q96EV2 1170 aaKnown RBP34.05■■■■□ 3.04
ACAA1-212ENST00000460424 RGL3Q3MIN7 710 aa34.03■■■■□ 3.04
ACAA1-212ENST00000460424 METP08581 1390 aa34■■■■□ 3.03
ACAA1-212ENST00000460424 AMOTL2Q9Y2J4 779 aa33.99■■■■□ 3.03
ACAA1-212ENST00000460424 MSH6P52701 1360 aa33.98■■■■□ 3.03
ACAA1-212ENST00000460424 ANKRD30BQ9BXX2 1392 aa33.98■■■■□ 3.03
ACAA1-212ENST00000460424 NCOA3Q9Y6Q9 1424 aa33.95■■■■□ 3.02
ACAA1-212ENST00000460424 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.93■■■■□ 3.02
ACAA1-212ENST00000460424 ADGRF5Q8IZF2 1346 aa33.91■■■■□ 3.02
ACAA1-212ENST00000460424 C14orf37Q86TY3 774 aa33.9■■■■□ 3.02
ACAA1-212ENST00000460424 ROBO1Q9Y6N7 1651 aa33.89■■■■□ 3.02
ACAA1-212ENST00000460424 MYOM2P54296 1465 aa33.88■■■■□ 3.01
ACAA1-212ENST00000460424 HSPA1LP34931 641 aa33.87■■■■□ 3.01
ACAA1-212ENST00000460424 PIK3C2GO75747 1445 aa33.87■■■■□ 3.01
ACAA1-212ENST00000460424 NALCNQ8IZF0 1738 aa33.85■■■■□ 3.01
ACAA1-212ENST00000460424 LAMC1P11047 1609 aa33.85■■■■□ 3.01
ACAA1-212ENST00000460424 PTCH1Q13635 1447 aa33.83■■■■□ 3.01
ACAA1-212ENST00000460424 NRXN1Q9ULB1 1477 aa33.81■■■■□ 3
ACAA1-212ENST00000460424 FAM135BQ49AJ0 1406 aa33.8■■■■□ 3
ACAA1-212ENST00000460424 PRAG1Q86YV5 1406 aa33.8■■■■□ 3
ACAA1-212ENST00000460424 ASXL1Q8IXJ9 1541 aa33.8■■■■□ 3
ACAA1-212ENST00000460424 KNDC1Q76NI1 1749 aa33.79■■■■□ 3
ACAA1-212ENST00000460424 C19orf44Q9H6X5 657 aa33.78■■■■□ 3
ACAA1-212ENST00000460424 DCCP43146 1447 aa33.77■■■■□ 3
ACAA1-212ENST00000460424 ADGRL3Q9HAR2 1447 aa33.76■■■□□ 2.99
ACAA1-212ENST00000460424 ATF3P18847 181 aa33.74■■■□□ 2.99
ACAA1-212ENST00000460424 CADPS2Q86UW7 1296 aa33.74■■■□□ 2.99
ACAA1-212ENST00000460424 ROBO2Q9HCK4 1378 aa33.73■■■□□ 2.99
ACAA1-212ENST00000460424 SLAIN2Q9P270 581 aa33.73■■■□□ 2.99
ACAA1-212ENST00000460424 TRIM26Q12899 539 aaPredicted RBP33.72■■■□□ 2.99
ACAA1-212ENST00000460424 PHLPP1O60346 1717 aa33.7■■■□□ 2.98
ACAA1-212ENST00000460424 TECPR2O15040 1411 aa33.68■■■□□ 2.98
ACAA1-212ENST00000460424 LRPPRCP42704 1394 aaKnown RBP33.67■■■□□ 2.98
ACAA1-212ENST00000460424 TMEM132EQ6IEE7 984 aa33.66■■■□□ 2.98
ACAA1-212ENST00000460424 DCAF11Q8TEB1 546 aa33.66■■■□□ 2.98
ACAA1-212ENST00000460424 YTHDC2Q9H6S0 1430 aaKnown RBP33.65■■■□□ 2.98
ACAA1-212ENST00000460424 C14orf93Q9H972 538 aaKnown RBP33.65■■■□□ 2.98
ACAA1-212ENST00000460424 DHX57Q6P158 1386 aaKnown RBP33.64■■■□□ 2.98
ACAA1-212ENST00000460424 STK26Q9P289 416 aa33.64■■■□□ 2.98
ACAA1-212ENST00000460424 MST1RQ04912 1400 aa33.63■■■□□ 2.97
ACAA1-212ENST00000460424 CFAP70Q5T0N1 1121 aa33.63■■■□□ 2.97
ACAA1-212ENST00000460424 KDM2AQ9Y2K7 1162 aa33.63■■■□□ 2.97
ACAA1-212ENST00000460424 MED1Q15648 1581 aaPredicted RBP33.61■■■□□ 2.97
ACAA1-212ENST00000460424 ABCC11Q96J66 1382 aa33.6■■■□□ 2.97
ACAA1-212ENST00000460424 STAC3Q96MF2 364 aa33.59■■■□□ 2.97
ACAA1-212ENST00000460424 CDC42BPGQ6DT37 1551 aa33.59■■■□□ 2.97
ACAA1-212ENST00000460424 DISP3Q9P2K9 1392 aa33.59■■■□□ 2.97
ACAA1-212ENST00000460424 AHDC1Q5TGY3 1603 aaPredicted RBP33.58■■■□□ 2.97
ACAA1-212ENST00000460424 COL16A1Q07092 1604 aaPredicted RBP33.57■■■□□ 2.97
ACAA1-212ENST00000460424 ADGRB1O14514 1584 aa33.57■■■□□ 2.96
ACAA1-212ENST00000460424 NHSL1Q5SYE7 1610 aa33.54■■■□□ 2.96
ACAA1-212ENST00000460424 BRINP3Q76B58 766 aa33.52■■■□□ 2.96
ACAA1-212ENST00000460424 KIAA1210Q9ULL0 1709 aa33.51■■■□□ 2.96
ACAA1-212ENST00000460424 PLEKHH1Q9ULM0 1364 aa33.51■■■□□ 2.96
ACAA1-212ENST00000460424 WAPLQ7Z5K2 1190 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms