RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 HDGFP51858 240 aaKnown RBP24.34■■□□□ 1.49
CPSF6-203ENST00000456847 SENP3Q9H4L4 574 aaPredicted RBP24.32■■□□□ 1.48
CPSF6-203ENST00000456847 TRPM2O94759 1503 aa24.32■■□□□ 1.48
CPSF6-203ENST00000456847 LRRC7Q96NW7 1537 aa24.32■■□□□ 1.48
CPSF6-203ENST00000456847 SLC26A8Q96RN1 970 aa24.31■■□□□ 1.48
CPSF6-203ENST00000456847 CLTCL1P53675 1640 aa24.31■■□□□ 1.48
CPSF6-203ENST00000456847 PLEKHG1Q9ULL1 1385 aa24.3■■□□□ 1.48
CPSF6-203ENST00000456847 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.29■■□□□ 1.48
CPSF6-203ENST00000456847 KIF1BO60333 1816 aa24.28■■□□□ 1.48
CPSF6-203ENST00000456847 SLC4A1APQ9BWU0 796 aaKnown RBP24.28■■□□□ 1.48
CPSF6-203ENST00000456847 SCAF1Q9H7N4 1312 aaKnown RBP24.27■■□□□ 1.48
CPSF6-203ENST00000456847 TOM1O60784 492 aa24.26■■□□□ 1.47
CPSF6-203ENST00000456847 NUTM2DQ5VT03 806 aaPredicted RBP24.26■■□□□ 1.47
CPSF6-203ENST00000456847 XIRP1Q702N8 1843 aaKnown RBP24.24■■□□□ 1.47
CPSF6-203ENST00000456847 ZNF326Q5BKZ1 582 aaKnown RBP24.24■■□□□ 1.47
CPSF6-203ENST00000456847 NWD1Q149M9 1564 aa24.24■■□□□ 1.47
CPSF6-203ENST00000456847 PIP4K2BP78356 416 aa24.23■■□□□ 1.47
CPSF6-203ENST00000456847 KCNA6P17658 529 aa24.22■■□□□ 1.47
CPSF6-203ENST00000456847 DIP2AQ14689 1571 aa24.21■■□□□ 1.47
CPSF6-203ENST00000456847 CHD2O14647 1828 aaKnown RBP24.2■■□□□ 1.46
CPSF6-203ENST00000456847 NKTRP30414 1462 aaKnown RBP24.2■■□□□ 1.46
CPSF6-203ENST00000456847 SETD5Q9C0A6 1442 aa24.19■■□□□ 1.46
CPSF6-203ENST00000456847 ALKQ9UM73 1620 aa24.17■■□□□ 1.46
CPSF6-203ENST00000456847 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
CPSF6-203ENST00000456847 NEXMIFQ5QGS0 1516 aa24.16■■□□□ 1.46
CPSF6-203ENST00000456847 PROSER2Q86WR7 435 aaPredicted RBP24.16■■□□□ 1.46
CPSF6-203ENST00000456847 TMEM94Q12767 1356 aa24.16■■□□□ 1.46
CPSF6-203ENST00000456847 FOXD1Q16676 465 aa24.15■■□□□ 1.46
CPSF6-203ENST00000456847 TBX22Q9Y458 520 aa24.15■■□□□ 1.46
CPSF6-203ENST00000456847 ACIN1Q9UKV3 1341 aaKnown RBP24.13■■□□□ 1.45
CPSF6-203ENST00000456847 MPHOSPH9Q99550 1183 aa24.13■■□□□ 1.45
CPSF6-203ENST00000456847 NRXN3Q9Y4C0 1643 aa24.13■■□□□ 1.45
CPSF6-203ENST00000456847 SETBP1Q9Y6X0 1596 aa24.12■■□□□ 1.45
CPSF6-203ENST00000456847 RAB3GAP2Q9H2M9 1393 aa24.11■■□□□ 1.45
CPSF6-203ENST00000456847 RBM33Q96EV2 1170 aaKnown RBP24.1■■□□□ 1.45
CPSF6-203ENST00000456847 PIK3R4Q99570 1358 aa24.09■■□□□ 1.45
CPSF6-203ENST00000456847 CCDC144AA2RUR9 1427 aa24.09■■□□□ 1.45
CPSF6-203ENST00000456847 HSPA1LP34931 641 aa24.07■■□□□ 1.44
CPSF6-203ENST00000456847 PPLO60437 1756 aa24.07■■□□□ 1.44
CPSF6-203ENST00000456847 MSH6P52701 1360 aa24.05■■□□□ 1.44
CPSF6-203ENST00000456847 XRN1Q8IZH2 1706 aaKnown RBP24.02■■□□□ 1.44
CPSF6-203ENST00000456847 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.44
CPSF6-203ENST00000456847 PTPRUQ92729 1446 aa24.02■■□□□ 1.44
CPSF6-203ENST00000456847 C14orf37Q86TY3 774 aa24.02■■□□□ 1.44
CPSF6-203ENST00000456847 VGFO15240 615 aaPredicted RBP24.01■■□□□ 1.43
CPSF6-203ENST00000456847 AMOTL2Q9Y2J4 779 aa24.01■■□□□ 1.43
CPSF6-203ENST00000456847 DISP3Q9P2K9 1392 aa23.99■■□□□ 1.43
CPSF6-203ENST00000456847 IFT172Q9UG01 1749 aa23.98■■□□□ 1.43
CPSF6-203ENST00000456847 ROBO1Q9Y6N7 1651 aa23.98■■□□□ 1.43
CPSF6-203ENST00000456847 NCOA3Q9Y6Q9 1424 aa23.98■■□□□ 1.43
CPSF6-203ENST00000456847 METP08581 1390 aa23.98■■□□□ 1.43
CPSF6-203ENST00000456847 SETD1AO15047 1707 aaKnown RBP23.97■■□□□ 1.43
CPSF6-203ENST00000456847 RGL3Q3MIN7 710 aa23.96■■□□□ 1.43
CPSF6-203ENST00000456847 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.96■■□□□ 1.43
CPSF6-203ENST00000456847 SPATA31E1Q6ZUB1 1445 aa23.95■■□□□ 1.43
CPSF6-203ENST00000456847 FAM135BQ49AJ0 1406 aa23.94■■□□□ 1.42
CPSF6-203ENST00000456847 ANKRD30BQ9BXX2 1392 aa23.9■■□□□ 1.42
CPSF6-203ENST00000456847 ATF3P18847 181 aa23.89■■□□□ 1.42
CPSF6-203ENST00000456847 MED1Q15648 1581 aaPredicted RBP23.89■■□□□ 1.41
CPSF6-203ENST00000456847 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
CPSF6-203ENST00000456847 SLAIN2Q9P270 581 aa23.88■■□□□ 1.41
CPSF6-203ENST00000456847 HRCP23327 699 aa23.88■■□□□ 1.41
CPSF6-203ENST00000456847 ADGRF5Q8IZF2 1346 aa23.87■■□□□ 1.41
CPSF6-203ENST00000456847 CADPS2Q86UW7 1296 aa23.87■■□□□ 1.41
CPSF6-203ENST00000456847 NALCNQ8IZF0 1738 aa23.87■■□□□ 1.41
CPSF6-203ENST00000456847 PHLPP1O60346 1717 aa23.85■■□□□ 1.41
CPSF6-203ENST00000456847 DCCP43146 1447 aa23.84■■□□□ 1.41
CPSF6-203ENST00000456847 PTCH1Q13635 1447 aa23.84■■□□□ 1.41
CPSF6-203ENST00000456847 ADGRL3Q9HAR2 1447 aa23.83■■□□□ 1.41
CPSF6-203ENST00000456847 PIK3C2GO75747 1445 aa23.81■■□□□ 1.4
CPSF6-203ENST00000456847 MYOM2P54296 1465 aa23.79■■□□□ 1.4
CPSF6-203ENST00000456847 ROBO2Q9HCK4 1378 aa23.79■■□□□ 1.4
CPSF6-203ENST00000456847 PRAG1Q86YV5 1406 aa23.79■■□□□ 1.4
CPSF6-203ENST00000456847 LAMC1P11047 1609 aa23.78■■□□□ 1.4
CPSF6-203ENST00000456847 KNDC1Q76NI1 1749 aa23.77■■□□□ 1.4
CPSF6-203ENST00000456847 ASXL1Q8IXJ9 1541 aa23.77■■□□□ 1.4
CPSF6-203ENST00000456847 MST1RQ04912 1400 aa23.75■■□□□ 1.39
CPSF6-203ENST00000456847 STK26Q9P289 416 aa23.74■■□□□ 1.39
CPSF6-203ENST00000456847 COL16A1Q07092 1604 aaPredicted RBP23.74■■□□□ 1.39
CPSF6-203ENST00000456847 NRXN1Q9ULB1 1477 aa23.74■■□□□ 1.39
CPSF6-203ENST00000456847 AHDC1Q5TGY3 1603 aaPredicted RBP23.74■■□□□ 1.39
CPSF6-203ENST00000456847 PHF23Q9BUL5 403 aaPredicted RBP23.74■■□□□ 1.39
CPSF6-203ENST00000456847 LRPPRCP42704 1394 aaKnown RBP23.73■■□□□ 1.39
CPSF6-203ENST00000456847 TMEM132EQ6IEE7 984 aa23.72■■□□□ 1.39
CPSF6-203ENST00000456847 ILDR2Q71H61 639 aa23.71■■□□□ 1.39
CPSF6-203ENST00000456847 BRINP3Q76B58 766 aa23.71■■□□□ 1.39
CPSF6-203ENST00000456847 TECPR2O15040 1411 aa23.7■■□□□ 1.38
CPSF6-203ENST00000456847 YTHDC2Q9H6S0 1430 aaKnown RBP23.69■■□□□ 1.38
CPSF6-203ENST00000456847 NHSL1Q5SYE7 1610 aa23.68■■□□□ 1.38
CPSF6-203ENST00000456847 C14orf93Q9H972 538 aaKnown RBP23.68■■□□□ 1.38
CPSF6-203ENST00000456847 JCADQ9P266 1359 aa23.68■■□□□ 1.38
CPSF6-203ENST00000456847 CFAP70Q5T0N1 1121 aa23.67■■□□□ 1.38
CPSF6-203ENST00000456847 KDM2AQ9Y2K7 1162 aa23.67■■□□□ 1.38
CPSF6-203ENST00000456847 ABCC11Q96J66 1382 aa23.67■■□□□ 1.38
CPSF6-203ENST00000456847 CDC42BPGQ6DT37 1551 aa23.67■■□□□ 1.38
CPSF6-203ENST00000456847 DCAF11Q8TEB1 546 aa23.67■■□□□ 1.38
CPSF6-203ENST00000456847 DHX57Q6P158 1386 aaKnown RBP23.66■■□□□ 1.38
CPSF6-203ENST00000456847 C1orf167Q5SNV9 1468 aa23.66■■□□□ 1.38
CPSF6-203ENST00000456847 WAPLQ7Z5K2 1190 aa23.64■■□□□ 1.37
CPSF6-203ENST00000456847 SHPRHQ149N8 1683 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms