RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 CGNL1Q0VF96 1302 aa17.65■□□□□ 0.42
PTPRE-204ENST00000455661 PLA2R1Q13018 1463 aa17.64■□□□□ 0.41
PTPRE-204ENST00000455661 POGKQ9P215 609 aa17.64■□□□□ 0.41
PTPRE-204ENST00000455661 USP19O94966 1318 aa17.64■□□□□ 0.41
PTPRE-204ENST00000455661 MYO5CQ9NQX4 1742 aa17.64■□□□□ 0.41
PTPRE-204ENST00000455661 MAGI2Q86UL8 1455 aa17.64■□□□□ 0.41
PTPRE-204ENST00000455661 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
PTPRE-204ENST00000455661 E9PSI1 815 aa17.63■□□□□ 0.41
PTPRE-204ENST00000455661 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
PTPRE-204ENST00000455661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPRE-204ENST00000455661 BCAR3O75815 825 aa17.63■□□□□ 0.41
PTPRE-204ENST00000455661 IGHDP01880 384 aa17.63■□□□□ 0.41
PTPRE-204ENST00000455661 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
PTPRE-204ENST00000455661 PIK3C2GO75747 1445 aa17.62■□□□□ 0.41
PTPRE-204ENST00000455661 ATP10BO94823 1461 aa17.62■□□□□ 0.41
PTPRE-204ENST00000455661 PDE3AQ14432 1141 aa17.62■□□□□ 0.41
PTPRE-204ENST00000455661 ABCA8O94911 1581 aa17.62■□□□□ 0.41
PTPRE-204ENST00000455661 UPF2Q9HAU5 1272 aaKnown RBP17.61■□□□□ 0.41
PTPRE-204ENST00000455661 NINLQ9Y2I6 1382 aa17.61■□□□□ 0.41
PTPRE-204ENST00000455661 CCDC146Q8IYE0 955 aa17.61■□□□□ 0.41
PTPRE-204ENST00000455661 UNC13BO14795 1591 aa17.61■□□□□ 0.41
PTPRE-204ENST00000455661 JPH4Q96JJ6 628 aa17.6■□□□□ 0.41
PTPRE-204ENST00000455661 SLKQ9H2G2 1235 aaPredicted RBP17.6■□□□□ 0.41
PTPRE-204ENST00000455661 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
PTPRE-204ENST00000455661 ASXL1Q8IXJ9 1541 aa17.6■□□□□ 0.41
PTPRE-204ENST00000455661 APAF1O14727 1248 aa17.59■□□□□ 0.41
PTPRE-204ENST00000455661 CANXP27824 592 aaKnown RBP17.59■□□□□ 0.41
PTPRE-204ENST00000455661 CLUAP1Q96AJ1 413 aa17.59■□□□□ 0.41
PTPRE-204ENST00000455661 ABCC2Q92887 1545 aa17.59■□□□□ 0.41
PTPRE-204ENST00000455661 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
PTPRE-204ENST00000455661 RNF17Q9BXT8 1623 aaKnown RBP17.58■□□□□ 0.4
PTPRE-204ENST00000455661 SYNMO15061 1565 aa17.58■□□□□ 0.4
PTPRE-204ENST00000455661 SEC24BO95487 1268 aa17.58■□□□□ 0.4
PTPRE-204ENST00000455661 SPINK5Q9NQ38 1064 aaPredicted RBP17.58■□□□□ 0.4
PTPRE-204ENST00000455661 NPC1L1Q9UHC9 1359 aa17.57■□□□□ 0.4
PTPRE-204ENST00000455661 SAMD9LQ8IVG5 1584 aa17.57■□□□□ 0.4
PTPRE-204ENST00000455661 CENPJQ9HC77 1338 aaPredicted RBP17.56■□□□□ 0.4
PTPRE-204ENST00000455661 IQGAP3Q86VI3 1631 aa17.56■□□□□ 0.4
PTPRE-204ENST00000455661 ATP10AO60312 1499 aa17.55■□□□□ 0.4
PTPRE-204ENST00000455661 PMFBP1Q8TBY8 1022 aa17.55■□□□□ 0.4
PTPRE-204ENST00000455661 ANTXR1Q9H6X2 564 aa17.55■□□□□ 0.4
PTPRE-204ENST00000455661 RRAGDQ9NQL2 400 aaPredicted RBP17.55■□□□□ 0.4
PTPRE-204ENST00000455661 AAMPQ13685 434 aa17.54■□□□□ 0.4
PTPRE-204ENST00000455661 FBLN2P98095 1184 aa17.54■□□□□ 0.4
PTPRE-204ENST00000455661 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
PTPRE-204ENST00000455661 MAST1Q9Y2H9 1570 aa17.53■□□□□ 0.4
PTPRE-204ENST00000455661 GOLGA6L3A6NEY3 463 aa17.52■□□□□ 0.4
PTPRE-204ENST00000455661 PREX2Q70Z35 1606 aa17.52■□□□□ 0.4
PTPRE-204ENST00000455661 ZMYM3Q14202 1370 aa17.52■□□□□ 0.39
PTPRE-204ENST00000455661 PANK1Q8TE04 598 aa17.52■□□□□ 0.39
PTPRE-204ENST00000455661 NLRP1Q9C000 1473 aa17.52■□□□□ 0.39
PTPRE-204ENST00000455661 CDC42BPBQ9Y5S2 1711 aa17.51■□□□□ 0.39
PTPRE-204ENST00000455661 IQGAP1P46940 1657 aa17.51■□□□□ 0.39
PTPRE-204ENST00000455661 TBC1D32Q96NH3 1257 aa17.51■□□□□ 0.39
PTPRE-204ENST00000455661 PLXNC1O60486 1568 aa17.5■□□□□ 0.39
PTPRE-204ENST00000455661 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
PTPRE-204ENST00000455661 TBC1D2Q9BYX2 928 aa17.49■□□□□ 0.39
PTPRE-204ENST00000455661 GLIPR1L2Q4G1C9 344 aa17.49■□□□□ 0.39
PTPRE-204ENST00000455661 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
PTPRE-204ENST00000455661 STAC3Q96MF2 364 aa17.48■□□□□ 0.39
PTPRE-204ENST00000455661 MADDQ8WXG6 1647 aa17.47■□□□□ 0.39
PTPRE-204ENST00000455661 XRCC6P12956 609 aaKnown RBP eCLIP17.47■□□□□ 0.39
PTPRE-204ENST00000455661 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
PTPRE-204ENST00000455661 MCM4P33991 863 aa17.46■□□□□ 0.39
PTPRE-204ENST00000455661 WWC1Q8IX03 1113 aa17.46■□□□□ 0.39
PTPRE-204ENST00000455661 FSD2A1L4K1 749 aa17.46■□□□□ 0.38
PTPRE-204ENST00000455661 SLC24A1O60721 1099 aa17.46■□□□□ 0.38
PTPRE-204ENST00000455661 PNNQ9H307 717 aaKnown RBP17.46■□□□□ 0.38
PTPRE-204ENST00000455661 RWDD1Q9H446 243 aaPredicted RBP17.46■□□□□ 0.38
PTPRE-204ENST00000455661 DUOX2Q9NRD8 1548 aa17.45■□□□□ 0.38
PTPRE-204ENST00000455661 SCAPERQ9BY12 1400 aa17.45■□□□□ 0.38
PTPRE-204ENST00000455661 ARXQ96QS3 562 aa17.45■□□□□ 0.38
PTPRE-204ENST00000455661 ARHGAP5Q13017 1502 aa17.45■□□□□ 0.38
PTPRE-204ENST00000455661 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
PTPRE-204ENST00000455661 MYOM1P52179 1685 aa17.44■□□□□ 0.38
PTPRE-204ENST00000455661 NAP1L5Q96NT1 182 aaPredicted RBP17.44■□□□□ 0.38
PTPRE-204ENST00000455661 CLCN1P35523 988 aa17.43■□□□□ 0.38
PTPRE-204ENST00000455661 CHMP5Q9NZZ3 219 aa17.43■□□□□ 0.38
PTPRE-204ENST00000455661 KDM5AP29375 1690 aaKnown RBP17.43■□□□□ 0.38
PTPRE-204ENST00000455661 RARSP54136 660 aaKnown RBP17.42■□□□□ 0.38
PTPRE-204ENST00000455661 PCDHB15Q9Y5E8 787 aa17.42■□□□□ 0.38
PTPRE-204ENST00000455661 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
PTPRE-204ENST00000455661 MRE11P49959 708 aa17.41■□□□□ 0.38
PTPRE-204ENST00000455661 TRAK2O60296 914 aa17.4■□□□□ 0.38
PTPRE-204ENST00000455661 SPRYD3Q8NCJ5 442 aa17.4■□□□□ 0.38
PTPRE-204ENST00000455661 POLR3AO14802 1390 aaPredicted RBP17.4■□□□□ 0.38
PTPRE-204ENST00000455661 SPHKAPQ2M3C7 1700 aa17.39■□□□□ 0.37
PTPRE-204ENST00000455661 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
PTPRE-204ENST00000455661 TTC37Q6PGP7 1564 aa17.38■□□□□ 0.37
PTPRE-204ENST00000455661 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
PTPRE-204ENST00000455661 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
PTPRE-204ENST00000455661 NEUROD2Q15784 382 aa17.37■□□□□ 0.37
PTPRE-204ENST00000455661 RUNDC1Q96C34 613 aa17.37■□□□□ 0.37
PTPRE-204ENST00000455661 PANK2Q9BZ23 570 aa17.37■□□□□ 0.37
PTPRE-204ENST00000455661 ISY1Q9ULR0 285 aaKnown RBP17.37■□□□□ 0.37
PTPRE-204ENST00000455661 DDX11L8A8MPP1 907 aa17.36■□□□□ 0.37
PTPRE-204ENST00000455661 WDR63Q8IWG1 891 aa17.36■□□□□ 0.37
PTPRE-204ENST00000455661 RLBP1P12271 317 aa17.36■□□□□ 0.37
PTPRE-204ENST00000455661 CARD14Q9BXL6 1004 aa17.35■□□□□ 0.37
PTPRE-204ENST00000455661 MYH16Q9H6N6 1097 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms