RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 NALCNQ8IZF0 1738 aa7.67□□□□□ -1.18
RIF1-207ENST00000454583 RALGAPBQ86X10 1494 aa7.67□□□□□ -1.18
RIF1-207ENST00000454583 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.67□□□□□ -1.18
RIF1-207ENST00000454583 RAPGEF3O95398 923 aa7.66□□□□□ -1.18
RIF1-207ENST00000454583 LMTK3Q96Q04 1460 aa7.66□□□□□ -1.18
RIF1-207ENST00000454583 DLC1Q96QB1 1528 aa7.66□□□□□ -1.18
RIF1-207ENST00000454583 ACIN1Q9UKV3 1341 aaKnown RBP7.65□□□□□ -1.19
RIF1-207ENST00000454583 NLRP1Q9C000 1473 aa7.64□□□□□ -1.19
RIF1-207ENST00000454583 MON2Q7Z3U7 1717 aa7.64□□□□□ -1.19
RIF1-207ENST00000454583 SETD1BQ9UPS6 1966 aaKnown RBP7.64□□□□□ -1.19
RIF1-207ENST00000454583 SPAG9O60271 1321 aaKnown RBP7.64□□□□□ -1.19
RIF1-207ENST00000454583 KCNH8Q96L42 1107 aa7.63□□□□□ -1.19
RIF1-207ENST00000454583 FMN2Q9NZ56 1722 aa7.63□□□□□ -1.19
RIF1-207ENST00000454583 TECPR2O15040 1411 aa7.61□□□□□ -1.19
RIF1-207ENST00000454583 RGPD8O14715 1765 aaPredicted RBP7.61□□□□□ -1.19
RIF1-207ENST00000454583 TRPM3Q9HCF6 1732 aaPredicted RBP7.61□□□□□ -1.19
RIF1-207ENST00000454583 MPHOSPH9Q99550 1183 aa7.6□□□□□ -1.19
RIF1-207ENST00000454583 ABCA3Q99758 1704 aa7.59□□□□□ -1.19
RIF1-207ENST00000454583 ADAMTS13Q76LX8 1427 aa7.59□□□□□ -1.19
RIF1-207ENST00000454583 SHPRHQ149N8 1683 aa7.59□□□□□ -1.19
RIF1-207ENST00000454583 NUP155O75694 1391 aa7.59□□□□□ -1.19
RIF1-207ENST00000454583 SLC4A1APQ9BWU0 796 aaKnown RBP7.59□□□□□ -1.2
RIF1-207ENST00000454583 PHRF1Q9P1Y6 1649 aaKnown RBP7.58□□□□□ -1.2
RIF1-207ENST00000454583 NPM1P06748 294 aaKnown RBP eCLIP7.58□□□□□ -1.2
RIF1-207ENST00000454583 RRP7BPQ9NSQ0 103 aa7.57□□□□□ -1.2
RIF1-207ENST00000454583 TULP4Q9NRJ4 1543 aa7.57□□□□□ -1.2
RIF1-207ENST00000454583 ZMYM3Q14202 1370 aa7.57□□□□□ -1.2
RIF1-207ENST00000454583 LTBP4Q8N2S1 1624 aa7.57□□□□□ -1.2
RIF1-207ENST00000454583 TTBK1Q5TCY1 1321 aaPredicted RBP7.56□□□□□ -1.2
RIF1-207ENST00000454583 ITSN1Q15811 1721 aa7.55□□□□□ -1.2
RIF1-207ENST00000454583 KIF20BQ96Q89 1820 aa7.55□□□□□ -1.2
RIF1-207ENST00000454583 KDM4FA0A1W2PPD8 638 aa7.55□□□□□ -1.2
RIF1-207ENST00000454583 LRRC7Q96NW7 1537 aa7.54□□□□□ -1.2
RIF1-207ENST00000454583 ALS2Q96Q42 1657 aa7.54□□□□□ -1.2
RIF1-207ENST00000454583 NHSL1Q5SYE7 1610 aa7.54□□□□□ -1.2
RIF1-207ENST00000454583 PTPRUQ92729 1446 aa7.54□□□□□ -1.2
RIF1-207ENST00000454583 CAMTA1Q9Y6Y1 1673 aa7.54□□□□□ -1.2
RIF1-207ENST00000454583 TIMELESSQ9UNS1 1208 aa7.54□□□□□ -1.2
RIF1-207ENST00000454583 APLP2Q06481 763 aa7.53□□□□□ -1.2
RIF1-207ENST00000454583 MAPK8IP2Q13387 824 aaPredicted RBP7.53□□□□□ -1.2
RIF1-207ENST00000454583 FAM50AQ14320 339 aaKnown RBP7.53□□□□□ -1.2
RIF1-207ENST00000454583 CD163L1Q9NR16 1453 aa7.53□□□□□ -1.2
RIF1-207ENST00000454583 CDC42BPGQ6DT37 1551 aa7.53□□□□□ -1.2
RIF1-207ENST00000454583 CHIC2Q9UKJ5 165 aa7.52□□□□□ -1.21
RIF1-207ENST00000454583 ATP1B4Q9UN42 357 aaPredicted RBP7.51□□□□□ -1.21
RIF1-207ENST00000454583 MST1RQ04912 1400 aa7.51□□□□□ -1.21
RIF1-207ENST00000454583 RGPD1P0DJD0 1748 aa7.51□□□□□ -1.21
RIF1-207ENST00000454583 WNK3Q9BYP7 1800 aa7.5□□□□□ -1.21
RIF1-207ENST00000454583 SBNO2Q9Y2G9 1366 aa7.5□□□□□ -1.21
RIF1-207ENST00000454583 PTCH1Q13635 1447 aa7.5□□□□□ -1.21
RIF1-207ENST00000454583 COL22A1Q8NFW1 1626 aaPredicted RBP7.49□□□□□ -1.21
RIF1-207ENST00000454583 TSPY4P0CV99 314 aa7.49□□□□□ -1.21
RIF1-207ENST00000454583 TSPY10P0CW01 314 aa7.49□□□□□ -1.21
RIF1-207ENST00000454583 NBPF8Q3BBV2 869 aa7.49□□□□□ -1.21
RIF1-207ENST00000454583 ZNF777Q9ULD5 760 aaPredicted RBP7.49□□□□□ -1.21
RIF1-207ENST00000454583 PIK3C2AO00443 1686 aa7.49□□□□□ -1.21
RIF1-207ENST00000454583 LMO7Q8WWI1 1683 aa7.49□□□□□ -1.21
RIF1-207ENST00000454583 PLEKHG1Q9ULL1 1385 aa7.48□□□□□ -1.21
RIF1-207ENST00000454583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.48□□□□□ -1.21
RIF1-207ENST00000454583 HNRNPUL2Q1KMD3 747 aaKnown RBP7.48□□□□□ -1.21
RIF1-207ENST00000454583 ZEB1P37275 1124 aaPredicted RBP7.48□□□□□ -1.21
RIF1-207ENST00000454583 CCDC144AA2RUR9 1427 aa7.48□□□□□ -1.21
RIF1-207ENST00000454583 COL18A1P39060 1754 aa7.48□□□□□ -1.21
RIF1-207ENST00000454583 TMEM2Q9UHN6 1383 aa7.47□□□□□ -1.21
RIF1-207ENST00000454583 PPP1R15AO75807 674 aaPredicted RBP7.47□□□□□ -1.21
RIF1-207ENST00000454583 PKD2Q13563 968 aa7.47□□□□□ -1.21
RIF1-207ENST00000454583 VIRMAQ69YN4 1812 aaKnown RBP7.47□□□□□ -1.21
RIF1-207ENST00000454583 SCAF11Q99590 1463 aaKnown RBP7.46□□□□□ -1.21
RIF1-207ENST00000454583 TNRQ92752 1358 aa7.46□□□□□ -1.22
RIF1-207ENST00000454583 KIF1AQ12756 1690 aa7.45□□□□□ -1.22
RIF1-207ENST00000454583 SIN3AQ96ST3 1273 aa7.45□□□□□ -1.22
RIF1-207ENST00000454583 FAM135BQ49AJ0 1406 aa7.45□□□□□ -1.22
RIF1-207ENST00000454583 KIF3BO15066 747 aa7.45□□□□□ -1.22
RIF1-207ENST00000454583 MED1Q15648 1581 aaPredicted RBP7.45□□□□□ -1.22
RIF1-207ENST00000454583 RIMS2Q9UQ26 1411 aa7.44□□□□□ -1.22
RIF1-207ENST00000454583 NKTRP30414 1462 aaKnown RBP7.44□□□□□ -1.22
RIF1-207ENST00000454583 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
RIF1-207ENST00000454583 KANK1Q14678 1352 aa7.44□□□□□ -1.22
RIF1-207ENST00000454583 RPGRIP1LQ68CZ1 1315 aa7.44□□□□□ -1.22
RIF1-207ENST00000454583 PEAK1Q9H792 1746 aa7.44□□□□□ -1.22
RIF1-207ENST00000454583 SSH2Q76I76 1423 aa7.44□□□□□ -1.22
RIF1-207ENST00000454583 FBXO31Q5XUX0 539 aaPredicted RBP7.43□□□□□ -1.22
RIF1-207ENST00000454583 IDI1Q13907 227 aa7.43□□□□□ -1.22
RIF1-207ENST00000454583 ADAMTS7Q9UKP4 1686 aa7.42□□□□□ -1.22
RIF1-207ENST00000454583 ATP7BP35670 1465 aa7.42□□□□□ -1.22
RIF1-207ENST00000454583 TESK2Q96S53 571 aa7.41□□□□□ -1.22
RIF1-207ENST00000454583 PIK3R4Q99570 1358 aa7.41□□□□□ -1.22
RIF1-207ENST00000454583 L3MBTL2Q969R5 705 aa7.41□□□□□ -1.22
RIF1-207ENST00000454583 ADGRF5Q8IZF2 1346 aa7.41□□□□□ -1.22
RIF1-207ENST00000454583 STAC3Q96MF2 364 aa7.41□□□□□ -1.22
RIF1-207ENST00000454583 SLC52A1Q9NWF4 448 aa7.41□□□□□ -1.22
RIF1-207ENST00000454583 METP08581 1390 aa7.4□□□□□ -1.22
RIF1-207ENST00000454583 NRAPQ86VF7 1730 aa7.4□□□□□ -1.22
RIF1-207ENST00000454583 C14orf93Q9H972 538 aaKnown RBP7.4□□□□□ -1.23
RIF1-207ENST00000454583 IQSEC2Q5JU85 1478 aa7.4□□□□□ -1.23
RIF1-207ENST00000454583 PLCH1Q4KWH8 1693 aa7.39□□□□□ -1.23
RIF1-207ENST00000454583 YTHDC2Q9H6S0 1430 aaKnown RBP7.39□□□□□ -1.23
RIF1-207ENST00000454583 LTN1O94822 1766 aa7.39□□□□□ -1.23
RIF1-207ENST00000454583 NCOA3Q9Y6Q9 1424 aa7.39□□□□□ -1.23
RIF1-207ENST00000454583 COL16A1Q07092 1604 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms