RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 ROBO1Q9Y6N7 1651 aa12.26□□□□□ -0.45
CNOT4-207ENST00000451834 CDC42BPGQ6DT37 1551 aa12.26□□□□□ -0.45
CNOT4-207ENST00000451834 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
CNOT4-207ENST00000451834 KANK1Q14678 1352 aa12.26□□□□□ -0.45
CNOT4-207ENST00000451834 ARID3CA6NKF2 412 aa12.25□□□□□ -0.45
CNOT4-207ENST00000451834 MYOM2P54296 1465 aa12.25□□□□□ -0.45
CNOT4-207ENST00000451834 NAIPQ13075 1403 aa12.25□□□□□ -0.45
CNOT4-207ENST00000451834 PTCH1Q13635 1447 aa12.25□□□□□ -0.45
CNOT4-207ENST00000451834 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
CNOT4-207ENST00000451834 TECPR2O15040 1411 aa12.24□□□□□ -0.45
CNOT4-207ENST00000451834 FAM135BQ49AJ0 1406 aa12.24□□□□□ -0.45
CNOT4-207ENST00000451834 ADAMTS13Q76LX8 1427 aa12.24□□□□□ -0.45
CNOT4-207ENST00000451834 DLC1Q96QB1 1528 aa12.24□□□□□ -0.45
CNOT4-207ENST00000451834 ABCA3Q99758 1704 aa12.24□□□□□ -0.45
CNOT4-207ENST00000451834 ARID4BQ4LE39 1312 aaPredicted RBP12.23□□□□□ -0.45
CNOT4-207ENST00000451834 PHLPP1O60346 1717 aa12.22□□□□□ -0.45
CNOT4-207ENST00000451834 TOPAZ1Q8N9V7 1692 aa12.21□□□□□ -0.45
CNOT4-207ENST00000451834 TSPY4P0CV99 314 aa12.2□□□□□ -0.46
CNOT4-207ENST00000451834 TSPY10P0CW01 314 aa12.2□□□□□ -0.46
CNOT4-207ENST00000451834 SLC52A1Q9NWF4 448 aa12.2□□□□□ -0.46
CNOT4-207ENST00000451834 THEMISQ8N1K5 641 aaPredicted RBP12.19□□□□□ -0.46
CNOT4-207ENST00000451834 MST1RQ04912 1400 aa12.17□□□□□ -0.46
CNOT4-207ENST00000451834 ASXL1Q8IXJ9 1541 aa12.16□□□□□ -0.46
CNOT4-207ENST00000451834 CFAP65Q6ZU64 1925 aaKnown RBP12.16□□□□□ -0.46
CNOT4-207ENST00000451834 SPATA31E1Q6ZUB1 1445 aa12.16□□□□□ -0.46
CNOT4-207ENST00000451834 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
CNOT4-207ENST00000451834 ITSN1Q15811 1721 aa12.15□□□□□ -0.46
CNOT4-207ENST00000451834 TRPM3Q9HCF6 1732 aaPredicted RBP12.15□□□□□ -0.47
CNOT4-207ENST00000451834 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-207ENST00000451834 NWD2Q9ULI1 1742 aa12.13□□□□□ -0.47
CNOT4-207ENST00000451834 CEBPAP49715 358 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-207ENST00000451834 RIMS2Q9UQ26 1411 aa12.13□□□□□ -0.47
CNOT4-207ENST00000451834 WASHC2CQ9Y4E1 1318 aa12.13□□□□□ -0.47
CNOT4-207ENST00000451834 KIF3BO15066 747 aa12.12□□□□□ -0.47
CNOT4-207ENST00000451834 PRKCSHP14314 528 aaPredicted RBP12.12□□□□□ -0.47
CNOT4-207ENST00000451834 GTF3C3Q9Y5Q9 886 aa12.12□□□□□ -0.47
CNOT4-207ENST00000451834 ARHGEF28Q8N1W1 1705 aaKnown RBP12.11□□□□□ -0.47
CNOT4-207ENST00000451834 ANKLE2Q86XL3 938 aa12.1□□□□□ -0.47
CNOT4-207ENST00000451834 ALS2Q96Q42 1657 aa12.1□□□□□ -0.47
CNOT4-207ENST00000451834 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
CNOT4-207ENST00000451834 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
CNOT4-207ENST00000451834 USP32Q8NFA0 1604 aa12.08□□□□□ -0.47
CNOT4-207ENST00000451834 RPGRIP1LQ68CZ1 1315 aa12.08□□□□□ -0.48
CNOT4-207ENST00000451834 PTPRUQ92729 1446 aa12.07□□□□□ -0.48
CNOT4-207ENST00000451834 NRAPQ86VF7 1730 aa12.07□□□□□ -0.48
CNOT4-207ENST00000451834 HSPA2P54652 639 aa12.07□□□□□ -0.48
CNOT4-207ENST00000451834 PIK3C2GO75747 1445 aa12.07□□□□□ -0.48
CNOT4-207ENST00000451834 SETD5Q9C0A6 1442 aa12.07□□□□□ -0.48
CNOT4-207ENST00000451834 ESF1Q9H501 851 aaKnown RBP12.07□□□□□ -0.48
CNOT4-207ENST00000451834 TBX22Q9Y458 520 aa12.07□□□□□ -0.48
CNOT4-207ENST00000451834 WNK3Q9BYP7 1800 aa12.07□□□□□ -0.48
CNOT4-207ENST00000451834 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
CNOT4-207ENST00000451834 KCNA6P17658 529 aa12.05□□□□□ -0.48
CNOT4-207ENST00000451834 ZNF777Q9ULD5 760 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-207ENST00000451834 RGPD3A6NKT7 1758 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-207ENST00000451834 RGPD4Q7Z3J3 1758 aa12.05□□□□□ -0.48
CNOT4-207ENST00000451834 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.04□□□□□ -0.48
CNOT4-207ENST00000451834 ADGRL3Q9HAR2 1447 aa12.04□□□□□ -0.48
CNOT4-207ENST00000451834 FBXO31Q5XUX0 539 aaPredicted RBP12.04□□□□□ -0.48
CNOT4-207ENST00000451834 SIRT1Q96EB6 747 aa12.04□□□□□ -0.48
CNOT4-207ENST00000451834 ZNF335Q9H4Z2 1342 aaPredicted RBP12.02□□□□□ -0.48
CNOT4-207ENST00000451834 ATP1B4Q9UN42 357 aaPredicted RBP12.01□□□□□ -0.49
CNOT4-207ENST00000451834 ABCC6O95255 1503 aa12.01□□□□□ -0.49
CNOT4-207ENST00000451834 RANGAP1P46060 587 aaPredicted RBP12.01□□□□□ -0.49
CNOT4-207ENST00000451834 LTKP29376 864 aa12□□□□□ -0.49
CNOT4-207ENST00000451834 MLECQ14165 292 aa12□□□□□ -0.49
CNOT4-207ENST00000451834 GGT6Q6P531 493 aa12□□□□□ -0.49
CNOT4-207ENST00000451834 PLCH1Q4KWH8 1693 aa12□□□□□ -0.49
CNOT4-207ENST00000451834 PHRF1Q9P1Y6 1649 aaKnown RBP11.99□□□□□ -0.49
CNOT4-207ENST00000451834 AKAP12Q02952 1782 aa11.99□□□□□ -0.49
CNOT4-207ENST00000451834 NRKQ7Z2Y5 1582 aa11.99□□□□□ -0.49
CNOT4-207ENST00000451834 TRPM1Q7Z4N2 1603 aa11.98□□□□□ -0.49
CNOT4-207ENST00000451834 IDI1Q13907 227 aa11.98□□□□□ -0.49
CNOT4-207ENST00000451834 PXDNQ92626 1479 aa11.97□□□□□ -0.49
CNOT4-207ENST00000451834 STAC3Q96MF2 364 aa11.97□□□□□ -0.49
CNOT4-207ENST00000451834 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
CNOT4-207ENST00000451834 ANKRD30BQ9BXX2 1392 aa11.95□□□□□ -0.5
CNOT4-207ENST00000451834 HDGFP51858 240 aaKnown RBP11.95□□□□□ -0.5
CNOT4-207ENST00000451834 ANKARQ7Z5J8 1434 aa11.95□□□□□ -0.5
CNOT4-207ENST00000451834 NUP155O75694 1391 aa11.94□□□□□ -0.5
CNOT4-207ENST00000451834 SOCS7O14512 581 aa11.93□□□□□ -0.5
CNOT4-207ENST00000451834 RGPD8O14715 1765 aaPredicted RBP11.93□□□□□ -0.5
CNOT4-207ENST00000451834 THSD7AQ9UPZ6 1657 aa11.92□□□□□ -0.5
CNOT4-207ENST00000451834 ABCC11Q96J66 1382 aa11.91□□□□□ -0.5
CNOT4-207ENST00000451834 RRP7BPQ9NSQ0 103 aa11.91□□□□□ -0.5
CNOT4-207ENST00000451834 QRICH2Q9H0J4 1663 aa11.91□□□□□ -0.5
CNOT4-207ENST00000451834 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
CNOT4-207ENST00000451834 COL24A1Q17RW2 1714 aa11.91□□□□□ -0.5
CNOT4-207ENST00000451834 EID1Q9Y6B2 187 aa11.9□□□□□ -0.5
CNOT4-207ENST00000451834 LRPPRCP42704 1394 aaKnown RBP11.9□□□□□ -0.5
CNOT4-207ENST00000451834 COL14A1Q05707 1796 aaKnown RBP11.9□□□□□ -0.5
CNOT4-207ENST00000451834 TOM1O60784 492 aa11.9□□□□□ -0.5
CNOT4-207ENST00000451834 LRP6O75581 1613 aa11.9□□□□□ -0.5
CNOT4-207ENST00000451834 LMO7Q8WWI1 1683 aa11.9□□□□□ -0.5
CNOT4-207ENST00000451834 TMEM94Q12767 1356 aa11.9□□□□□ -0.51
CNOT4-207ENST00000451834 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
CNOT4-207ENST00000451834 APLP2Q06481 763 aa11.89□□□□□ -0.51
CNOT4-207ENST00000451834 TULP4Q9NRJ4 1543 aa11.88□□□□□ -0.51
CNOT4-207ENST00000451834 SPATA31A6Q5VVP1 1343 aa11.87□□□□□ -0.51
CNOT4-207ENST00000451834 C1orf167Q5SNV9 1468 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms