RNA–Protein interactions for RNA: ENST00000451104.6

PITRM1-206, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 2 BASIC

Gene PITRM1, Length 3,183 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-206ENST00000451104 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
PITRM1-206ENST00000451104 FAM135AQ9P2D6 1515 aa18.49■□□□□ 0.55
PITRM1-206ENST00000451104 SPRYD3Q8NCJ5 442 aa18.48■□□□□ 0.55
PITRM1-206ENST00000451104 COG6Q9Y2V7 657 aa18.48■□□□□ 0.55
PITRM1-206ENST00000451104 ERCC6L2Q5T890 1561 aa18.48■□□□□ 0.55
PITRM1-206ENST00000451104 AMER1Q5JTC6 1135 aaPredicted RBP18.48■□□□□ 0.55
PITRM1-206ENST00000451104 PANK1Q8TE04 598 aa18.48■□□□□ 0.55
PITRM1-206ENST00000451104 EIF3AQ14152 1382 aaKnown RBP18.47■□□□□ 0.55
PITRM1-206ENST00000451104 CDC42BPAQ5VT25 1732 aa18.47■□□□□ 0.55
PITRM1-206ENST00000451104 SHANK2Q9UPX8 1470 aa18.46■□□□□ 0.55
PITRM1-206ENST00000451104 PLA2R1Q13018 1463 aa18.46■□□□□ 0.55
PITRM1-206ENST00000451104 CANXP27824 592 aaKnown RBP18.46■□□□□ 0.55
PITRM1-206ENST00000451104 GZF1Q9H116 711 aaPredicted RBP18.46■□□□□ 0.55
PITRM1-206ENST00000451104 TRMT2AQ8IZ69 625 aaKnown RBP18.45■□□□□ 0.54
PITRM1-206ENST00000451104 PRDM15P57071 1507 aaPredicted RBP18.45■□□□□ 0.54
PITRM1-206ENST00000451104 NKTRP30414 1462 aaKnown RBP18.43■□□□□ 0.54
PITRM1-206ENST00000451104 L1TD1Q5T7N2 865 aaKnown RBP18.43■□□□□ 0.54
PITRM1-206ENST00000451104 CLUAP1Q96AJ1 413 aa18.43■□□□□ 0.54
PITRM1-206ENST00000451104 ANTXR1Q9H6X2 564 aa18.43■□□□□ 0.54
PITRM1-206ENST00000451104 WDR7Q9Y4E6 1490 aa18.42■□□□□ 0.54
PITRM1-206ENST00000451104 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
PITRM1-206ENST00000451104 ADCY10Q96PN6 1610 aa18.42■□□□□ 0.54
PITRM1-206ENST00000451104 PANK2Q9BZ23 570 aa18.42■□□□□ 0.54
PITRM1-206ENST00000451104 XRCC6P12956 609 aaKnown RBP eCLIP18.41■□□□□ 0.54
PITRM1-206ENST00000451104 TBC1D2Q9BYX2 928 aa18.41■□□□□ 0.54
PITRM1-206ENST00000451104 MAPK8IP3Q9UPT6 1336 aa18.41■□□□□ 0.54
PITRM1-206ENST00000451104 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
PITRM1-206ENST00000451104 E9PSI1 815 aa18.4■□□□□ 0.54
PITRM1-206ENST00000451104 CGNL1Q0VF96 1302 aa18.4■□□□□ 0.54
PITRM1-206ENST00000451104 NAP1L5Q96NT1 182 aaPredicted RBP18.4■□□□□ 0.54
PITRM1-206ENST00000451104 NLRP1Q9C000 1473 aa18.38■□□□□ 0.53
PITRM1-206ENST00000451104 CENPJQ9HC77 1338 aaPredicted RBP18.38■□□□□ 0.53
PITRM1-206ENST00000451104 GOLGA6L3A6NEY3 463 aa18.38■□□□□ 0.53
PITRM1-206ENST00000451104 UPF2Q9HAU5 1272 aaKnown RBP18.38■□□□□ 0.53
PITRM1-206ENST00000451104 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
PITRM1-206ENST00000451104 TNNQ9UQP3 1299 aa18.37■□□□□ 0.53
PITRM1-206ENST00000451104 PDE3AQ14432 1141 aa18.36■□□□□ 0.53
PITRM1-206ENST00000451104 TBC1D32Q96NH3 1257 aa18.36■□□□□ 0.53
PITRM1-206ENST00000451104 BCL2L13Q9BXK5 485 aa18.35■□□□□ 0.53
PITRM1-206ENST00000451104 PCDHB15Q9Y5E8 787 aa18.35■□□□□ 0.53
PITRM1-206ENST00000451104 PNNQ9H307 717 aaKnown RBP18.34■□□□□ 0.53
PITRM1-206ENST00000451104 ATP10BO94823 1461 aa18.34■□□□□ 0.53
PITRM1-206ENST00000451104 MCM4P33991 863 aa18.33■□□□□ 0.52
PITRM1-206ENST00000451104 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
PITRM1-206ENST00000451104 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
PITRM1-206ENST00000451104 ABCA8O94911 1581 aa18.33■□□□□ 0.52
PITRM1-206ENST00000451104 CCDC141Q6ZP82 1450 aa18.32■□□□□ 0.52
PITRM1-206ENST00000451104 RLBP1P12271 317 aa18.32■□□□□ 0.52
PITRM1-206ENST00000451104 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
PITRM1-206ENST00000451104 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
PITRM1-206ENST00000451104 LAMC1P11047 1609 aa18.31■□□□□ 0.52
PITRM1-206ENST00000451104 WWC1Q8IX03 1113 aa18.31■□□□□ 0.52
PITRM1-206ENST00000451104 VIRMAQ69YN4 1812 aaKnown RBP18.31■□□□□ 0.52
PITRM1-206ENST00000451104 ASXL1Q8IXJ9 1541 aa18.3■□□□□ 0.52
PITRM1-206ENST00000451104 FSD2A1L4K1 749 aa18.3■□□□□ 0.52
PITRM1-206ENST00000451104 NPM1P06748 294 aaKnown RBP eCLIP18.3■□□□□ 0.52
PITRM1-206ENST00000451104 CDCA8Q53HL2 280 aa18.29■□□□□ 0.52
PITRM1-206ENST00000451104 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
PITRM1-206ENST00000451104 EIF2AK4Q9P2K8 1649 aaKnown RBP18.28■□□□□ 0.52
PITRM1-206ENST00000451104 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
PITRM1-206ENST00000451104 TRAK2O60296 914 aa18.28■□□□□ 0.52
PITRM1-206ENST00000451104 CLCN1P35523 988 aa18.27■□□□□ 0.52
PITRM1-206ENST00000451104 ARHGEF5Q12774 1597 aa18.27■□□□□ 0.52
PITRM1-206ENST00000451104 RARSP54136 660 aaKnown RBP18.27■□□□□ 0.51
PITRM1-206ENST00000451104 MFAP1P55081 439 aaKnown RBP18.27■□□□□ 0.51
PITRM1-206ENST00000451104 TNNT2P45379 298 aaPredicted RBP18.26■□□□□ 0.51
PITRM1-206ENST00000451104 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
PITRM1-206ENST00000451104 PKNOX2Q96KN3 472 aa18.26■□□□□ 0.51
PITRM1-206ENST00000451104 SAMD9LQ8IVG5 1584 aa18.25■□□□□ 0.51
PITRM1-206ENST00000451104 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
PITRM1-206ENST00000451104 HSP90AA2PQ14568 343 aaPredicted RBP18.24■□□□□ 0.51
PITRM1-206ENST00000451104 GLIPR1L2Q4G1C9 344 aa18.24■□□□□ 0.51
PITRM1-206ENST00000451104 CARD14Q9BXL6 1004 aa18.24■□□□□ 0.51
PITRM1-206ENST00000451104 HSP90AA1P07900 732 aaKnown RBP18.23■□□□□ 0.51
PITRM1-206ENST00000451104 RSPH4AQ5TD94 716 aa18.23■□□□□ 0.51
PITRM1-206ENST00000451104 C22orf23Q9BZE7 217 aa18.23■□□□□ 0.51
PITRM1-206ENST00000451104 CHMP5Q9NZZ3 219 aa18.23■□□□□ 0.51
PITRM1-206ENST00000451104 SYCP2Q9BX26 1530 aa18.22■□□□□ 0.51
PITRM1-206ENST00000451104 NINLQ9Y2I6 1382 aa18.22■□□□□ 0.51
PITRM1-206ENST00000451104 RWDD1Q9H446 243 aaPredicted RBP18.21■□□□□ 0.51
PITRM1-206ENST00000451104 SYNMO15061 1565 aa18.21■□□□□ 0.51
PITRM1-206ENST00000451104 MRE11P49959 708 aa18.2■□□□□ 0.5
PITRM1-206ENST00000451104 MYH16Q9H6N6 1097 aa18.2■□□□□ 0.5
PITRM1-206ENST00000451104 ERBB4Q15303 1308 aa18.2■□□□□ 0.5
PITRM1-206ENST00000451104 RNF17Q9BXT8 1623 aaKnown RBP18.2■□□□□ 0.5
PITRM1-206ENST00000451104 GRPEL1Q9HAV7 217 aa18.2■□□□□ 0.5
PITRM1-206ENST00000451104 SCAF11Q99590 1463 aaKnown RBP18.19■□□□□ 0.5
PITRM1-206ENST00000451104 ZMYND15Q9H091 742 aa18.19■□□□□ 0.5
PITRM1-206ENST00000451104 NPC1L1Q9UHC9 1359 aa18.19■□□□□ 0.5
PITRM1-206ENST00000451104 UNC13BO14795 1591 aa18.19■□□□□ 0.5
PITRM1-206ENST00000451104 TCP11L2Q8N4U5 519 aa18.19■□□□□ 0.5
PITRM1-206ENST00000451104 UHRF1BP1LA0JNW5 1464 aa18.17■□□□□ 0.5
PITRM1-206ENST00000451104 ESPNB1AK53 854 aa18.17■□□□□ 0.5
PITRM1-206ENST00000451104 CDC42BPBQ9Y5S2 1711 aa18.16■□□□□ 0.5
PITRM1-206ENST00000451104 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
PITRM1-206ENST00000451104 IQGAP3Q86VI3 1631 aa18.15■□□□□ 0.5
PITRM1-206ENST00000451104 HSCBQ8IWL3 235 aa18.15■□□□□ 0.5
PITRM1-206ENST00000451104 ATP10AO60312 1499 aa18.14■□□□□ 0.49
PITRM1-206ENST00000451104 ARHGAP5Q13017 1502 aa18.14■□□□□ 0.49
PITRM1-206ENST00000451104 MADDQ8WXG6 1647 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms