RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 STAC3Q96MF2 364 aa29.42■■■□□ 2.3
TTC3-210ENST00000450533 INSRP06213 1382 aa29.42■■■□□ 2.3
TTC3-210ENST00000450533 VWDEQ8N2E2 1590 aa29.41■■■□□ 2.3
TTC3-210ENST00000450533 CFAP70Q5T0N1 1121 aa29.4■■■□□ 2.3
TTC3-210ENST00000450533 ZMYM4Q5VZL5 1548 aa29.4■■■□□ 2.3
TTC3-210ENST00000450533 SYNMO15061 1565 aa29.38■■■□□ 2.29
TTC3-210ENST00000450533 WDR43Q15061 677 aaKnown RBP eCLIP29.37■■■□□ 2.29
TTC3-210ENST00000450533 ADGRF5Q8IZF2 1346 aa29.36■■■□□ 2.29
TTC3-210ENST00000450533 EIF3AQ14152 1382 aaKnown RBP29.36■■■□□ 2.29
TTC3-210ENST00000450533 MROH1Q8NDA8 1641 aa29.36■■■□□ 2.29
TTC3-210ENST00000450533 ASXL2Q76L83 1435 aa29.36■■■□□ 2.29
TTC3-210ENST00000450533 ASXL1Q8IXJ9 1541 aa29.33■■■□□ 2.29
TTC3-210ENST00000450533 MYOM1P52179 1685 aa29.32■■■□□ 2.28
TTC3-210ENST00000450533 PLEKHH1Q9ULM0 1364 aa29.31■■■□□ 2.28
TTC3-210ENST00000450533 NOP58Q9Y2X3 529 aaKnown RBP29.3■■■□□ 2.28
TTC3-210ENST00000450533 CRBNQ96SW2 442 aa29.29■■■□□ 2.28
TTC3-210ENST00000450533 PAK3O75914 559 aaPredicted RBP29.28■■■□□ 2.28
TTC3-210ENST00000450533 ABCA6Q8N139 1617 aa29.28■■■□□ 2.28
TTC3-210ENST00000450533 MAP3K4Q9Y6R4 1608 aa29.28■■■□□ 2.28
TTC3-210ENST00000450533 KIAA1210Q9ULL0 1709 aa29.27■■■□□ 2.28
TTC3-210ENST00000450533 ANP32AP39687 249 aaKnown RBP29.27■■■□□ 2.28
TTC3-210ENST00000450533 KIDINS220Q9ULH0 1771 aa29.26■■■□□ 2.27
TTC3-210ENST00000450533 EFCAB6Q5THR3 1501 aa29.26■■■□□ 2.27
TTC3-210ENST00000450533 KDM5AP29375 1690 aaKnown RBP29.26■■■□□ 2.27
TTC3-210ENST00000450533 CHGAP10645 457 aaKnown RBP29.26■■■□□ 2.27
TTC3-210ENST00000450533 MYOM2P54296 1465 aa29.24■■■□□ 2.27
TTC3-210ENST00000450533 KIF1BO60333 1816 aa29.24■■■□□ 2.27
TTC3-210ENST00000450533 C20orf194Q5TEA3 1177 aa29.24■■■□□ 2.27
TTC3-210ENST00000450533 CCDC146Q8IYE0 955 aa29.24■■■□□ 2.27
TTC3-210ENST00000450533 ERVK-7P63135 1459 aa29.24■■■□□ 2.27
TTC3-210ENST00000450533 PPRC1Q5VV67 1664 aaKnown RBP29.24■■■□□ 2.27
TTC3-210ENST00000450533 PIK3C2GO75747 1445 aa29.23■■■□□ 2.27
TTC3-210ENST00000450533 NEURL4Q96JN8 1562 aa29.22■■■□□ 2.27
TTC3-210ENST00000450533 DUSP27Q5VZP5 1158 aa29.22■■■□□ 2.27
TTC3-210ENST00000450533 MROH2AA6NES4 1674 aa29.22■■■□□ 2.27
TTC3-210ENST00000450533 TCERG1O14776 1098 aaKnown RBP29.2■■■□□ 2.27
TTC3-210ENST00000450533 CARD14Q9BXL6 1004 aa29.2■■■□□ 2.26
TTC3-210ENST00000450533 NPC1L1Q9UHC9 1359 aa29.2■■■□□ 2.26
TTC3-210ENST00000450533 IPO9Q96P70 1041 aaKnown RBP29.19■■■□□ 2.26
TTC3-210ENST00000450533 GOLGA2Q08379 1002 aa29.19■■■□□ 2.26
TTC3-210ENST00000450533 ZNF521Q96K83 1311 aa29.19■■■□□ 2.26
TTC3-210ENST00000450533 ZNF518AQ6AHZ1 1483 aa29.19■■■□□ 2.26
TTC3-210ENST00000450533 SKAP1Q86WV1 359 aa29.18■■■□□ 2.26
TTC3-210ENST00000450533 NOS1P29475 1434 aa29.18■■■□□ 2.26
TTC3-210ENST00000450533 GGT6Q6P531 493 aa29.17■■■□□ 2.26
TTC3-210ENST00000450533 CFAP65Q6ZU64 1925 aaKnown RBP29.16■■■□□ 2.26
TTC3-210ENST00000450533 IFT172Q9UG01 1749 aa29.16■■■□□ 2.26
TTC3-210ENST00000450533 NPM1P06748 294 aaKnown RBP eCLIP29.15■■■□□ 2.26
TTC3-210ENST00000450533 NPM2Q86SE8 214 aaKnown RBP29.15■■■□□ 2.26
TTC3-210ENST00000450533 PDE4AP27815 886 aa29.14■■■□□ 2.26
TTC3-210ENST00000450533 APAF1O14727 1248 aa29.13■■■□□ 2.25
TTC3-210ENST00000450533 TRAK1Q9UPV9 953 aa29.13■■■□□ 2.25
TTC3-210ENST00000450533 SLC24A1O60721 1099 aa29.12■■■□□ 2.25
TTC3-210ENST00000450533 LMTK2Q8IWU2 1503 aa29.11■■■□□ 2.25
TTC3-210ENST00000450533 NRXN1Q9ULB1 1477 aa29.11■■■□□ 2.25
TTC3-210ENST00000450533 NPATQ14207 1427 aa29.1■■■□□ 2.25
TTC3-210ENST00000450533 SLFN5Q08AF3 891 aa29.1■■■□□ 2.25
TTC3-210ENST00000450533 CENPJQ9HC77 1338 aaPredicted RBP29.1■■■□□ 2.25
TTC3-210ENST00000450533 SPINK5Q9NQ38 1064 aaPredicted RBP29.1■■■□□ 2.25
TTC3-210ENST00000450533 NBR1Q14596 966 aa29.09■■■□□ 2.25
TTC3-210ENST00000450533 ZBTB47Q9UFB7 747 aaPredicted RBP29.09■■■□□ 2.25
TTC3-210ENST00000450533 ADGRB3O60242 1522 aa29.09■■■□□ 2.25
TTC3-210ENST00000450533 CD109Q6YHK3 1445 aa29.09■■■□□ 2.25
TTC3-210ENST00000450533 TMEM132EQ6IEE7 984 aa29.08■■■□□ 2.25
TTC3-210ENST00000450533 BACH2Q9BYV9 841 aa29.08■■■□□ 2.25
TTC3-210ENST00000450533 POGZQ7Z3K3 1410 aa29.06■■■□□ 2.24
TTC3-210ENST00000450533 MS4A1P11836 297 aa29.06■■■□□ 2.24
TTC3-210ENST00000450533 FRMPD1Q5SYB0 1578 aa29.05■■■□□ 2.24
TTC3-210ENST00000450533 MYO3AQ8NEV4 1616 aa29.03■■■□□ 2.24
TTC3-210ENST00000450533 SBNO2Q9Y2G9 1366 aa29.03■■■□□ 2.24
TTC3-210ENST00000450533 TNNT2P45379 298 aaPredicted RBP29.03■■■□□ 2.24
TTC3-210ENST00000450533 NUTM2DQ5VT03 806 aaPredicted RBP29.02■■■□□ 2.24
TTC3-210ENST00000450533 SLC12A5Q9H2X9 1139 aa29.02■■■□□ 2.24
TTC3-210ENST00000450533 C14orf93Q9H972 538 aaKnown RBP29.02■■■□□ 2.24
TTC3-210ENST00000450533 TRMT2AQ8IZ69 625 aaKnown RBP29.01■■■□□ 2.23
TTC3-210ENST00000450533 DMRT2Q9Y5R5 561 aa29.01■■■□□ 2.23
TTC3-210ENST00000450533 NSD3Q9BZ95 1437 aa29■■■□□ 2.23
TTC3-210ENST00000450533 MLH3Q9UHC1 1453 aa28.99■■■□□ 2.23
TTC3-210ENST00000450533 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.99■■■□□ 2.23
TTC3-210ENST00000450533 SETBP1Q9Y6X0 1596 aa28.99■■■□□ 2.23
TTC3-210ENST00000450533 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
TTC3-210ENST00000450533 KDM2BQ8NHM5 1336 aa28.98■■■□□ 2.23
TTC3-210ENST00000450533 PPLO60437 1756 aa28.98■■■□□ 2.23
TTC3-210ENST00000450533 RAPGEF3O95398 923 aa28.98■■■□□ 2.23
TTC3-210ENST00000450533 HECW2Q9P2P5 1572 aa28.97■■■□□ 2.23
TTC3-210ENST00000450533 MORC1Q86VD1 984 aa28.97■■■□□ 2.23
TTC3-210ENST00000450533 BCAR3O75815 825 aa28.96■■■□□ 2.23
TTC3-210ENST00000450533 NKTRP30414 1462 aaKnown RBP28.95■■■□□ 2.23
TTC3-210ENST00000450533 ADGRB1O14514 1584 aa28.95■■■□□ 2.22
TTC3-210ENST00000450533 QRICH2Q9H0J4 1663 aa28.94■■■□□ 2.22
TTC3-210ENST00000450533 CFAP74Q9C0B2 1584 aa28.94■■■□□ 2.22
TTC3-210ENST00000450533 E9PSI1 815 aa28.94■■■□□ 2.22
TTC3-210ENST00000450533 ABCC3O15438 1527 aa28.93■■■□□ 2.22
TTC3-210ENST00000450533 POLR3AO14802 1390 aaPredicted RBP28.92■■■□□ 2.22
TTC3-210ENST00000450533 CENPQQ7L2Z9 268 aaPredicted RBP28.92■■■□□ 2.22
TTC3-210ENST00000450533 SENP3Q9H4L4 574 aaPredicted RBP28.92■■■□□ 2.22
TTC3-210ENST00000450533 ZC3H13Q5T200 1668 aaKnown RBP28.9■■■□□ 2.22
TTC3-210ENST00000450533 NEUROD2Q15784 382 aa28.89■■■□□ 2.22
TTC3-210ENST00000450533 RPGRIP1LQ68CZ1 1315 aa28.89■■■□□ 2.22
TTC3-210ENST00000450533 WWC1Q8IX03 1113 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms