RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 PRAG1Q86YV5 1406 aa17.08■□□□□ 0.32
SCAP-208ENST00000448217 CHGAP10645 457 aaKnown RBP17.06■□□□□ 0.32
SCAP-208ENST00000448217 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
SCAP-208ENST00000448217 SLIT1O75093 1534 aa17.06■□□□□ 0.32
SCAP-208ENST00000448217 ARHGAP23Q9P227 1491 aa17.05■□□□□ 0.32
SCAP-208ENST00000448217 KIAA1210Q9ULL0 1709 aa17.05■□□□□ 0.32
SCAP-208ENST00000448217 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
SCAP-208ENST00000448217 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
SCAP-208ENST00000448217 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
SCAP-208ENST00000448217 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
SCAP-208ENST00000448217 RALGAPBQ86X10 1494 aa17.04■□□□□ 0.32
SCAP-208ENST00000448217 TRPM1Q7Z4N2 1603 aa17.03■□□□□ 0.32
SCAP-208ENST00000448217 RIMS2Q9UQ26 1411 aa17.03■□□□□ 0.32
SCAP-208ENST00000448217 HDGFP51858 240 aaKnown RBP17.02■□□□□ 0.32
SCAP-208ENST00000448217 THEMISQ8N1K5 641 aaPredicted RBP17.02■□□□□ 0.32
SCAP-208ENST00000448217 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCAP-208ENST00000448217 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.32
SCAP-208ENST00000448217 PIK3C2GO75747 1445 aa17.02■□□□□ 0.31
SCAP-208ENST00000448217 GPRASP1Q5JY77 1395 aa17.01■□□□□ 0.31
SCAP-208ENST00000448217 ADGRF5Q8IZF2 1346 aa17■□□□□ 0.31
SCAP-208ENST00000448217 LAMC1P11047 1609 aa16.99■□□□□ 0.31
SCAP-208ENST00000448217 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
SCAP-208ENST00000448217 SETBP1Q9Y6X0 1596 aa16.97■□□□□ 0.31
SCAP-208ENST00000448217 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
SCAP-208ENST00000448217 PLEKHG1Q9ULL1 1385 aa16.94■□□□□ 0.3
SCAP-208ENST00000448217 NRXN3Q9Y4C0 1643 aa16.94■□□□□ 0.3
SCAP-208ENST00000448217 SCAF11Q99590 1463 aaKnown RBP16.93■□□□□ 0.3
SCAP-208ENST00000448217 EID1Q9Y6B2 187 aa16.93■□□□□ 0.3
SCAP-208ENST00000448217 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
SCAP-208ENST00000448217 LTKP29376 864 aa16.92■□□□□ 0.3
SCAP-208ENST00000448217 ADGRB1O14514 1584 aa16.92■□□□□ 0.3
SCAP-208ENST00000448217 ROCK2O75116 1388 aaKnown RBP16.91■□□□□ 0.3
SCAP-208ENST00000448217 TXNDC2Q86VQ3 553 aa16.91■□□□□ 0.3
SCAP-208ENST00000448217 ALKQ9UM73 1620 aa16.91■□□□□ 0.3
SCAP-208ENST00000448217 MED14O60244 1454 aa16.91■□□□□ 0.3
SCAP-208ENST00000448217 NBPF1Q3BBV0 1214 aa16.9■□□□□ 0.3
SCAP-208ENST00000448217 CFAP70Q5T0N1 1121 aa16.9■□□□□ 0.3
SCAP-208ENST00000448217 LMTK3Q96Q04 1460 aa16.9■□□□□ 0.3
SCAP-208ENST00000448217 IQGAP1P46940 1657 aa16.89■□□□□ 0.29
SCAP-208ENST00000448217 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
SCAP-208ENST00000448217 ANKLE2Q86XL3 938 aa16.89■□□□□ 0.29
SCAP-208ENST00000448217 POLR1AO95602 1720 aaPredicted RBP16.89■□□□□ 0.29
SCAP-208ENST00000448217 DIP2AQ14689 1571 aa16.89■□□□□ 0.29
SCAP-208ENST00000448217 ADAMTS13Q76LX8 1427 aa16.88■□□□□ 0.29
SCAP-208ENST00000448217 CARD11Q9BXL7 1154 aa16.88■□□□□ 0.29
SCAP-208ENST00000448217 ASXL1Q8IXJ9 1541 aa16.87■□□□□ 0.29
SCAP-208ENST00000448217 EIF4G2P78344 907 aaKnown RBP eCLIP16.86■□□□□ 0.29
SCAP-208ENST00000448217 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
SCAP-208ENST00000448217 USP47Q96K76 1375 aa16.85■□□□□ 0.29
SCAP-208ENST00000448217 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
SCAP-208ENST00000448217 HSPA5P11021 654 aaKnown RBP16.82■□□□□ 0.28
SCAP-208ENST00000448217 DLC1Q96QB1 1528 aa16.81■□□□□ 0.28
SCAP-208ENST00000448217 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
SCAP-208ENST00000448217 KNDC1Q76NI1 1749 aa16.81■□□□□ 0.28
SCAP-208ENST00000448217 TECPR2O15040 1411 aa16.8■□□□□ 0.28
SCAP-208ENST00000448217 YTHDC2Q9H6S0 1430 aaKnown RBP16.8■□□□□ 0.28
SCAP-208ENST00000448217 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
SCAP-208ENST00000448217 EIF3AQ14152 1382 aaKnown RBP16.8■□□□□ 0.28
SCAP-208ENST00000448217 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
SCAP-208ENST00000448217 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
SCAP-208ENST00000448217 METP08581 1390 aa16.79■□□□□ 0.28
SCAP-208ENST00000448217 ZNF316A6NFI3 1004 aaPredicted RBP16.79■□□□□ 0.28
SCAP-208ENST00000448217 TMEM132EQ6IEE7 984 aa16.79■□□□□ 0.28
SCAP-208ENST00000448217 SIRT1Q96EB6 747 aa16.79■□□□□ 0.28
SCAP-208ENST00000448217 STRCQ7RTU9 1775 aa16.78■□□□□ 0.28
SCAP-208ENST00000448217 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.28
SCAP-208ENST00000448217 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
SCAP-208ENST00000448217 XRN1Q8IZH2 1706 aaKnown RBP16.76■□□□□ 0.27
SCAP-208ENST00000448217 CPS1P31327 1500 aa16.75■□□□□ 0.27
SCAP-208ENST00000448217 CHD2O14647 1828 aaKnown RBP16.75■□□□□ 0.27
SCAP-208ENST00000448217 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
SCAP-208ENST00000448217 SLC24A1O60721 1099 aa16.75■□□□□ 0.27
SCAP-208ENST00000448217 HSPA2P54652 639 aa16.75■□□□□ 0.27
SCAP-208ENST00000448217 BCANQ96GW7 911 aa16.75■□□□□ 0.27
SCAP-208ENST00000448217 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
SCAP-208ENST00000448217 SLC26A8Q96RN1 970 aa16.74■□□□□ 0.27
SCAP-208ENST00000448217 TESK2Q96S53 571 aa16.74■□□□□ 0.27
SCAP-208ENST00000448217 PTPRUQ92729 1446 aa16.73■□□□□ 0.27
SCAP-208ENST00000448217 PTCH1Q13635 1447 aa16.72■□□□□ 0.27
SCAP-208ENST00000448217 TRAK1Q9UPV9 953 aa16.72■□□□□ 0.27
SCAP-208ENST00000448217 NWD1Q149M9 1564 aa16.72■□□□□ 0.27
SCAP-208ENST00000448217 CENPJQ9HC77 1338 aaPredicted RBP16.71■□□□□ 0.27
SCAP-208ENST00000448217 QRICH2Q9H0J4 1663 aa16.71■□□□□ 0.27
SCAP-208ENST00000448217 HIRIP3Q9BW71 556 aaPredicted RBP16.69■□□□□ 0.26
SCAP-208ENST00000448217 SENP3Q9H4L4 574 aaPredicted RBP16.69■□□□□ 0.26
SCAP-208ENST00000448217 STK26Q9P289 416 aa16.68■□□□□ 0.26
SCAP-208ENST00000448217 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
SCAP-208ENST00000448217 KCNA6P17658 529 aa16.67■□□□□ 0.26
SCAP-208ENST00000448217 ROBO2Q9HCK4 1378 aa16.66■□□□□ 0.26
SCAP-208ENST00000448217 PUS7Q96PZ0 661 aaKnown RBP16.66■□□□□ 0.26
SCAP-208ENST00000448217 PRAM1Q96QH2 718 aa16.66■□□□□ 0.26
SCAP-208ENST00000448217 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
SCAP-208ENST00000448217 CCDC7Q96M83 1385 aa16.65■□□□□ 0.26
SCAP-208ENST00000448217 C11orf95C9JLR9 678 aaPredicted RBP16.65■□□□□ 0.26
SCAP-208ENST00000448217 TMF1P82094 1093 aa16.65■□□□□ 0.26
SCAP-208ENST00000448217 NKTRP30414 1462 aaKnown RBP16.65■□□□□ 0.26
SCAP-208ENST00000448217 ADGRB2O60241 1585 aa16.64■□□□□ 0.25
SCAP-208ENST00000448217 WASHC2AQ641Q2 1341 aa16.64■□□□□ 0.25
SCAP-208ENST00000448217 CDCA8Q53HL2 280 aa16.63■□□□□ 0.25
SCAP-208ENST00000448217 POGKQ9P215 609 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms