RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 RRP7AQ9Y3A4 280 aaKnown RBP18.5■□□□□ 0.55
ERCC3-203ENST00000445889 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
ERCC3-203ENST00000445889 PANK1Q8TE04 598 aa18.49■□□□□ 0.55
ERCC3-203ENST00000445889 WDR7Q9Y4E6 1490 aa18.48■□□□□ 0.55
ERCC3-203ENST00000445889 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.48■□□□□ 0.55
ERCC3-203ENST00000445889 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
ERCC3-203ENST00000445889 PRDM15P57071 1507 aaPredicted RBP18.47■□□□□ 0.55
ERCC3-203ENST00000445889 CFAP70Q5T0N1 1121 aa18.47■□□□□ 0.55
ERCC3-203ENST00000445889 COG6Q9Y2V7 657 aa18.47■□□□□ 0.55
ERCC3-203ENST00000445889 SEC24BO95487 1268 aa18.47■□□□□ 0.55
ERCC3-203ENST00000445889 ARHGEF5Q12774 1597 aa18.46■□□□□ 0.55
ERCC3-203ENST00000445889 BCL2L13Q9BXK5 485 aa18.46■□□□□ 0.55
ERCC3-203ENST00000445889 CDC42BPBQ9Y5S2 1711 aa18.45■□□□□ 0.54
ERCC3-203ENST00000445889 CANXP27824 592 aaKnown RBP18.45■□□□□ 0.54
ERCC3-203ENST00000445889 CARD14Q9BXL6 1004 aa18.44■□□□□ 0.54
ERCC3-203ENST00000445889 TNNQ9UQP3 1299 aa18.44■□□□□ 0.54
ERCC3-203ENST00000445889 TTC37Q6PGP7 1564 aa18.41■□□□□ 0.54
ERCC3-203ENST00000445889 SLKQ9H2G2 1235 aaPredicted RBP18.41■□□□□ 0.54
ERCC3-203ENST00000445889 CLUAP1Q96AJ1 413 aa18.4■□□□□ 0.54
ERCC3-203ENST00000445889 CHGAP10645 457 aaKnown RBP18.4■□□□□ 0.54
ERCC3-203ENST00000445889 CDCA8Q53HL2 280 aa18.39■□□□□ 0.54
ERCC3-203ENST00000445889 PRKCSHP14314 528 aaPredicted RBP18.39■□□□□ 0.53
ERCC3-203ENST00000445889 EFCAB2Q5VUJ9 269 aa18.39■□□□□ 0.53
ERCC3-203ENST00000445889 ARXQ96QS3 562 aa18.39■□□□□ 0.53
ERCC3-203ENST00000445889 TRAPPC8Q9Y2L5 1435 aa18.39■□□□□ 0.53
ERCC3-203ENST00000445889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.39■□□□□ 0.53
ERCC3-203ENST00000445889 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
ERCC3-203ENST00000445889 KIF3BO15066 747 aa18.38■□□□□ 0.53
ERCC3-203ENST00000445889 ADGRF5Q8IZF2 1346 aa18.38■□□□□ 0.53
ERCC3-203ENST00000445889 SPAG9O60271 1321 aaKnown RBP18.37■□□□□ 0.53
ERCC3-203ENST00000445889 INSRP06213 1382 aa18.37■□□□□ 0.53
ERCC3-203ENST00000445889 SPRYD3Q8NCJ5 442 aa18.37■□□□□ 0.53
ERCC3-203ENST00000445889 E9PSI1 815 aa18.36■□□□□ 0.53
ERCC3-203ENST00000445889 PREX2Q70Z35 1606 aa18.36■□□□□ 0.53
ERCC3-203ENST00000445889 WWC1Q8IX03 1113 aa18.36■□□□□ 0.53
ERCC3-203ENST00000445889 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
ERCC3-203ENST00000445889 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
ERCC3-203ENST00000445889 USP19O94966 1318 aa18.34■□□□□ 0.53
ERCC3-203ENST00000445889 SLC12A5Q9H2X9 1139 aa18.34■□□□□ 0.53
ERCC3-203ENST00000445889 TRAK1Q9UPV9 953 aa18.34■□□□□ 0.53
ERCC3-203ENST00000445889 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.53
ERCC3-203ENST00000445889 RLBP1P12271 317 aa18.33■□□□□ 0.52
ERCC3-203ENST00000445889 ASXL1Q8IXJ9 1541 aa18.32■□□□□ 0.52
ERCC3-203ENST00000445889 NUTM2DQ5VT03 806 aaPredicted RBP18.32■□□□□ 0.52
ERCC3-203ENST00000445889 UNC13BO14795 1591 aa18.32■□□□□ 0.52
ERCC3-203ENST00000445889 POGKQ9P215 609 aa18.32■□□□□ 0.52
ERCC3-203ENST00000445889 SCAF11Q99590 1463 aaKnown RBP18.32■□□□□ 0.52
ERCC3-203ENST00000445889 ERCC6L2Q5T890 1561 aa18.31■□□□□ 0.52
ERCC3-203ENST00000445889 PCDHB15Q9Y5E8 787 aa18.31■□□□□ 0.52
ERCC3-203ENST00000445889 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
ERCC3-203ENST00000445889 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
ERCC3-203ENST00000445889 DUOX2Q9NRD8 1548 aa18.29■□□□□ 0.52
ERCC3-203ENST00000445889 EIF2AK4Q9P2K8 1649 aaKnown RBP18.29■□□□□ 0.52
ERCC3-203ENST00000445889 IQGAP3Q86VI3 1631 aa18.29■□□□□ 0.52
ERCC3-203ENST00000445889 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
ERCC3-203ENST00000445889 EIF5BO60841 1220 aaKnown RBP18.28■□□□□ 0.52
ERCC3-203ENST00000445889 PIK3C2GO75747 1445 aa18.28■□□□□ 0.52
ERCC3-203ENST00000445889 LAMC1P11047 1609 aa18.27■□□□□ 0.52
ERCC3-203ENST00000445889 ATP10AO60312 1499 aa18.27■□□□□ 0.52
ERCC3-203ENST00000445889 EIF3AQ14152 1382 aaKnown RBP18.27■□□□□ 0.51
ERCC3-203ENST00000445889 SAFB2Q14151 953 aaKnown RBP eCLIP18.26■□□□□ 0.51
ERCC3-203ENST00000445889 MAST1Q9Y2H9 1570 aa18.26■□□□□ 0.51
ERCC3-203ENST00000445889 RARSP54136 660 aaKnown RBP18.26■□□□□ 0.51
ERCC3-203ENST00000445889 CGNL1Q0VF96 1302 aa18.25■□□□□ 0.51
ERCC3-203ENST00000445889 UGGT1Q9NYU2 1555 aa18.25■□□□□ 0.51
ERCC3-203ENST00000445889 PLCH2O75038 1416 aa18.25■□□□□ 0.51
ERCC3-203ENST00000445889 MTHFSP49914 203 aa18.25■□□□□ 0.51
ERCC3-203ENST00000445889 PDE3AQ14432 1141 aa18.25■□□□□ 0.51
ERCC3-203ENST00000445889 PDZRN3Q9UPQ7 1066 aa18.24■□□□□ 0.51
ERCC3-203ENST00000445889 MADDQ8WXG6 1647 aa18.23■□□□□ 0.51
ERCC3-203ENST00000445889 TSR2Q969E8 191 aaKnown RBP18.22■□□□□ 0.51
ERCC3-203ENST00000445889 ERVK-7P63135 1459 aa18.21■□□□□ 0.51
ERCC3-203ENST00000445889 GZF1Q9H116 711 aaPredicted RBP18.2■□□□□ 0.5
ERCC3-203ENST00000445889 SCAPERQ9BY12 1400 aa18.2■□□□□ 0.5
ERCC3-203ENST00000445889 U2AF1L5P0DN76 240 aaPredicted RBP18.2■□□□□ 0.5
ERCC3-203ENST00000445889 U2AF1Q01081 240 aaKnown RBP eCLIP18.2■□□□□ 0.5
ERCC3-203ENST00000445889 RUNDC1Q96C34 613 aa18.19■□□□□ 0.5
ERCC3-203ENST00000445889 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
ERCC3-203ENST00000445889 RNF17Q9BXT8 1623 aaKnown RBP18.19■□□□□ 0.5
ERCC3-203ENST00000445889 SYNMO15061 1565 aa18.19■□□□□ 0.5
ERCC3-203ENST00000445889 PLXNC1O60486 1568 aa18.19■□□□□ 0.5
ERCC3-203ENST00000445889 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
ERCC3-203ENST00000445889 CLTCL1P53675 1640 aa18.17■□□□□ 0.5
ERCC3-203ENST00000445889 BECN1Q14457 450 aa18.17■□□□□ 0.5
ERCC3-203ENST00000445889 TBC1D2Q9BYX2 928 aa18.17■□□□□ 0.5
ERCC3-203ENST00000445889 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
ERCC3-203ENST00000445889 GGT6Q6P531 493 aa18.17■□□□□ 0.5
ERCC3-203ENST00000445889 IQGAP1P46940 1657 aa18.16■□□□□ 0.5
ERCC3-203ENST00000445889 KANK1Q14678 1352 aa18.16■□□□□ 0.5
ERCC3-203ENST00000445889 MFAP1P55081 439 aaKnown RBP18.16■□□□□ 0.5
ERCC3-203ENST00000445889 U2SURPO15042 1029 aaKnown RBP18.15■□□□□ 0.5
ERCC3-203ENST00000445889 PTPRTO14522 1441 aa18.15■□□□□ 0.5
ERCC3-203ENST00000445889 UPF2Q9HAU5 1272 aaKnown RBP18.15■□□□□ 0.5
ERCC3-203ENST00000445889 ABCC2Q92887 1545 aa18.14■□□□□ 0.49
ERCC3-203ENST00000445889 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
ERCC3-203ENST00000445889 PMFBP1Q8TBY8 1022 aa18.14■□□□□ 0.49
ERCC3-203ENST00000445889 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
ERCC3-203ENST00000445889 CABP2Q9NPB3 220 aa18.13■□□□□ 0.49
ERCC3-203ENST00000445889 MYOM1P52179 1685 aa18.13■□□□□ 0.49
ERCC3-203ENST00000445889 TRPM2O94759 1503 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms