RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 MTA3Q9BTC8 594 aa5.37□□□□□ -1.55
UBR3-206ENST00000444475 VRTNQ9H8Y1 702 aa5.37□□□□□ -1.55
UBR3-206ENST00000444475 FAN1Q9Y2M0 1017 aa5.37□□□□□ -1.55
UBR3-206ENST00000444475 PEX14O75381 377 aa5.37□□□□□ -1.55
UBR3-206ENST00000444475 EXOC5O00471 708 aa5.37□□□□□ -1.55
UBR3-206ENST00000444475 CUEDC1Q9NWM3 386 aaPredicted RBP5.37□□□□□ -1.55
UBR3-206ENST00000444475 MYT1LQ9UL68 1186 aa5.37□□□□□ -1.55
UBR3-206ENST00000444475 TBX22Q9Y458 520 aa5.37□□□□□ -1.55
UBR3-206ENST00000444475 CREB3O43889 395 aa5.36□□□□□ -1.55
UBR3-206ENST00000444475 VTI1AQ96AJ9 217 aa5.36□□□□□ -1.55
UBR3-206ENST00000444475 CSB-PGBD3P0DP91 1061 aa5.36□□□□□ -1.55
UBR3-206ENST00000444475 CACTIN-AS1Q8N1I8 211 aa5.36□□□□□ -1.55
UBR3-206ENST00000444475 ADAMTS19Q8TE59 1207 aa5.36□□□□□ -1.55
UBR3-206ENST00000444475 MFRPQ9BY79 579 aa5.36□□□□□ -1.55
UBR3-206ENST00000444475 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.36□□□□□ -1.55
UBR3-206ENST00000444475 FOSBP53539 338 aa5.36□□□□□ -1.55
UBR3-206ENST00000444475 C4orf46Q504U0 113 aa5.36□□□□□ -1.55
UBR3-206ENST00000444475 NLGN1Q8N2Q7 840 aa5.36□□□□□ -1.55
UBR3-206ENST00000444475 CALR3Q96L12 384 aaKnown RBP5.36□□□□□ -1.55
UBR3-206ENST00000444475 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.36□□□□□ -1.55
UBR3-206ENST00000444475 SNRKQ9NRH2 765 aa5.36□□□□□ -1.55
UBR3-206ENST00000444475 FOXD4Q12950 439 aaPredicted RBP5.35□□□□□ -1.55
UBR3-206ENST00000444475 FBXO31Q5XUX0 539 aaPredicted RBP5.35□□□□□ -1.55
UBR3-206ENST00000444475 BRINP2Q9C0B6 783 aa5.35□□□□□ -1.55
UBR3-206ENST00000444475 MYBPC2Q14324 1141 aa5.35□□□□□ -1.55
UBR3-206ENST00000444475 WWC1Q8IX03 1113 aa5.35□□□□□ -1.55
UBR3-206ENST00000444475 REPIN1Q9BWE0 567 aaKnown RBP5.35□□□□□ -1.55
UBR3-206ENST00000444475 LNPKQ9C0E8 428 aa5.35□□□□□ -1.55
UBR3-206ENST00000444475 PPP1R37O75864 691 aa5.34□□□□□ -1.55
UBR3-206ENST00000444475 PPP4CP60510 307 aa5.34□□□□□ -1.55
UBR3-206ENST00000444475 KRBA2Q6ZNG9 492 aa5.34□□□□□ -1.55
UBR3-206ENST00000444475 BANK1Q8NDB2 785 aa5.34□□□□□ -1.55
UBR3-206ENST00000444475 TMUB1Q9BVT8 246 aa5.34□□□□□ -1.55
UBR3-206ENST00000444475 BCL2L13Q9BXK5 485 aa5.34□□□□□ -1.55
UBR3-206ENST00000444475 QTRT2Q9H974 415 aaKnown RBP5.34□□□□□ -1.55
UBR3-206ENST00000444475 PHLDB3Q6NSJ2 640 aa5.34□□□□□ -1.56
UBR3-206ENST00000444475 TSHZ1Q6ZSZ6 1077 aa5.33□□□□□ -1.56
UBR3-206ENST00000444475 FAM9BQ8IZU0 186 aa5.33□□□□□ -1.56
UBR3-206ENST00000444475 SDR16C5Q8N3Y7 309 aa5.33□□□□□ -1.56
UBR3-206ENST00000444475 SOCS7O14512 581 aa5.33□□□□□ -1.56
UBR3-206ENST00000444475 NEFMP07197 916 aa5.33□□□□□ -1.56
UBR3-206ENST00000444475 GIGYF2Q6Y7W6 1299 aaKnown RBP5.33□□□□□ -1.56
UBR3-206ENST00000444475 PABPN1Q86U42 306 aaKnown RBP eCLIP5.33□□□□□ -1.56
UBR3-206ENST00000444475 PAX3P23760 479 aa5.32□□□□□ -1.56
UBR3-206ENST00000444475 OS9Q13438 667 aaPredicted RBP5.32□□□□□ -1.56
UBR3-206ENST00000444475 PTPROQ16827 1216 aa5.32□□□□□ -1.56
UBR3-206ENST00000444475 PDAP1Q13442 181 aaKnown RBP5.32□□□□□ -1.56
UBR3-206ENST00000444475 GIPC2Q8TF65 315 aa5.32□□□□□ -1.56
UBR3-206ENST00000444475 CHPF2Q9P2E5 772 aa5.32□□□□□ -1.56
UBR3-206ENST00000444475 SDE2Q6IQ49 451 aa5.32□□□□□ -1.56
UBR3-206ENST00000444475 FBXO33Q7Z6M2 555 aa5.31□□□□□ -1.56
UBR3-206ENST00000444475 MTMR14Q8NCE2 650 aa5.31□□□□□ -1.56
UBR3-206ENST00000444475 PROCA1Q8NCQ7 364 aaPredicted RBP5.31□□□□□ -1.56
UBR3-206ENST00000444475 NAP1L2Q9ULW6 460 aaPredicted RBP5.31□□□□□ -1.56
UBR3-206ENST00000444475 TMA7Q9Y2S6 64 aaKnown RBP5.31□□□□□ -1.56
UBR3-206ENST00000444475 ZFYVE27Q5T4F4 411 aa5.31□□□□□ -1.56
UBR3-206ENST00000444475 ARID4AP29374 1257 aaPredicted RBP5.31□□□□□ -1.56
UBR3-206ENST00000444475 RPUSD2Q8IZ73 545 aaKnown RBP5.31□□□□□ -1.56
UBR3-206ENST00000444475 SSUH2Q9Y2M2 353 aa5.31□□□□□ -1.56
UBR3-206ENST00000444475 ATG7O95352 703 aa5.3□□□□□ -1.56
UBR3-206ENST00000444475 LDLRAD1Q5T700 205 aa5.3□□□□□ -1.56
UBR3-206ENST00000444475 IPO4Q8TEX9 1081 aaKnown RBP5.3□□□□□ -1.56
UBR3-206ENST00000444475 CCDC180Q9P1Z9 1646 aa5.3□□□□□ -1.56
UBR3-206ENST00000444475 RAD51AP2Q09MP3 1159 aa5.3□□□□□ -1.56
UBR3-206ENST00000444475 GNL3LQ9NVN8 582 aaKnown RBP5.3□□□□□ -1.56
UBR3-206ENST00000444475 PPP1R1BQ9UD71 204 aaPredicted RBP5.3□□□□□ -1.56
UBR3-206ENST00000444475 RINLQ6ZS11 566 aa5.3□□□□□ -1.56
UBR3-206ENST00000444475 SENP7Q9BQF6 1050 aa5.3□□□□□ -1.56
UBR3-206ENST00000444475 GDPD2Q9HCC8 539 aa5.3□□□□□ -1.56
UBR3-206ENST00000444475 SLC39A13Q96H72 371 aa5.29□□□□□ -1.56
UBR3-206ENST00000444475 SPOCK3Q9BQ16 436 aa5.29□□□□□ -1.56
UBR3-206ENST00000444475 PIF1Q9H611 641 aa5.29□□□□□ -1.56
UBR3-206ENST00000444475 BDNFP23560 247 aa5.29□□□□□ -1.56
UBR3-206ENST00000444475 GYS2P54840 703 aa5.29□□□□□ -1.56
UBR3-206ENST00000444475 TCEAL1Q15170 157 aa5.29□□□□□ -1.56
UBR3-206ENST00000444475 TINF2Q9BSI4 451 aa5.29□□□□□ -1.56
UBR3-206ENST00000444475 CRISPLD2Q9H0B8 497 aa5.29□□□□□ -1.56
UBR3-206ENST00000444475 NOP58Q9Y2X3 529 aaKnown RBP5.29□□□□□ -1.56
UBR3-206ENST00000444475 PTMAP06454 111 aaKnown RBP5.28□□□□□ -1.56
UBR3-206ENST00000444475 PNMA2Q9UL42 364 aa5.28□□□□□ -1.56
UBR3-206ENST00000444475 HMGB1P1B2RPK0 211 aaPredicted RBP5.28□□□□□ -1.56
UBR3-206ENST00000444475 IGBP1P78318 339 aa5.28□□□□□ -1.56
UBR3-206ENST00000444475 C11orf96Q7Z7L8 435 aa5.28□□□□□ -1.56
UBR3-206ENST00000444475 STAG1Q8WVM7 1258 aa5.28□□□□□ -1.56
UBR3-206ENST00000444475 PIK3R5Q8WYR1 880 aa5.28□□□□□ -1.56
UBR3-206ENST00000444475 hCG_2014768A0A024R1R8 64 aa5.28□□□□□ -1.56
UBR3-206ENST00000444475 EVA1CP58658 441 aa5.28□□□□□ -1.56
UBR3-206ENST00000444475 CCDC144BQ3MJ40 725 aa5.28□□□□□ -1.56
UBR3-206ENST00000444475 JADE2Q9NQC1 790 aa5.28□□□□□ -1.56
UBR3-206ENST00000444475 CCER2I3L3R5 266 aa5.27□□□□□ -1.57
UBR3-206ENST00000444475 FBXO22Q8NEZ5 403 aa5.27□□□□□ -1.57
UBR3-206ENST00000444475 PNISRQ8TF01 805 aaKnown RBP5.27□□□□□ -1.57
UBR3-206ENST00000444475 CLSPNQ9HAW4 1339 aa5.27□□□□□ -1.57
UBR3-206ENST00000444475 PLEKHG6Q3KR16 790 aa5.27□□□□□ -1.57
UBR3-206ENST00000444475 RTL5Q5HYW3 569 aaPredicted RBP5.27□□□□□ -1.57
UBR3-206ENST00000444475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.27□□□□□ -1.57
UBR3-206ENST00000444475 PPP1R12CQ9BZL4 782 aa5.27□□□□□ -1.57
UBR3-206ENST00000444475 GABBR1Q9UBS5 961 aa5.27□□□□□ -1.57
UBR3-206ENST00000444475 FECHP22830 423 aa5.27□□□□□ -1.57
UBR3-206ENST00000444475 ARMC5Q96C12 935 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms