RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 KIAA1210Q9ULL0 1709 aa21.94■■□□□ 1.1
PIKFYVE-206ENST00000443896 SCAF11Q99590 1463 aaKnown RBP21.93■■□□□ 1.1
PIKFYVE-206ENST00000443896 NLRP13Q86W25 1043 aa21.91■■□□□ 1.1
PIKFYVE-206ENST00000443896 UGGT1Q9NYU2 1555 aa21.91■■□□□ 1.1
PIKFYVE-206ENST00000443896 MYOM2P54296 1465 aa21.91■■□□□ 1.1
PIKFYVE-206ENST00000443896 FRMPD1Q5SYB0 1578 aa21.9■■□□□ 1.1
PIKFYVE-206ENST00000443896 HECW2Q9P2P5 1572 aa21.9■■□□□ 1.1
PIKFYVE-206ENST00000443896 PANK3Q9H999 370 aa21.9■■□□□ 1.1
PIKFYVE-206ENST00000443896 KIF1BO60333 1816 aa21.89■■□□□ 1.1
PIKFYVE-206ENST00000443896 MAP3K4Q9Y6R4 1608 aa21.88■■□□□ 1.09
PIKFYVE-206ENST00000443896 NUDCQ9Y266 331 aa21.87■■□□□ 1.09
PIKFYVE-206ENST00000443896 IFT172Q9UG01 1749 aa21.87■■□□□ 1.09
PIKFYVE-206ENST00000443896 NEO1Q92859 1461 aa21.86■■□□□ 1.09
PIKFYVE-206ENST00000443896 MROH2AA6NES4 1674 aa21.84■■□□□ 1.09
PIKFYVE-206ENST00000443896 EIF3AQ14152 1382 aaKnown RBP21.84■■□□□ 1.09
PIKFYVE-206ENST00000443896 ABCA6Q8N139 1617 aa21.84■■□□□ 1.09
PIKFYVE-206ENST00000443896 PPP4R2Q9NY27 417 aa21.83■■□□□ 1.08
PIKFYVE-206ENST00000443896 NRXN1Q9ULB1 1477 aa21.83■■□□□ 1.08
PIKFYVE-206ENST00000443896 CDCA8Q53HL2 280 aa21.82■■□□□ 1.08
PIKFYVE-206ENST00000443896 SYNMO15061 1565 aa21.82■■□□□ 1.08
PIKFYVE-206ENST00000443896 ADGRB3O60242 1522 aa21.82■■□□□ 1.08
PIKFYVE-206ENST00000443896 CC2D1BQ5T0F9 858 aaKnown RBP21.81■■□□□ 1.08
PIKFYVE-206ENST00000443896 NPATQ14207 1427 aa21.81■■□□□ 1.08
PIKFYVE-206ENST00000443896 RNF123Q5XPI4 1314 aa21.8■■□□□ 1.08
PIKFYVE-206ENST00000443896 ADGRF5Q8IZF2 1346 aa21.8■■□□□ 1.08
PIKFYVE-206ENST00000443896 INSRP06213 1382 aa21.79■■□□□ 1.08
PIKFYVE-206ENST00000443896 ZMYM4Q5VZL5 1548 aa21.79■■□□□ 1.08
PIKFYVE-206ENST00000443896 CFAP70Q5T0N1 1121 aa21.78■■□□□ 1.08
PIKFYVE-206ENST00000443896 ABCC3O15438 1527 aa21.78■■□□□ 1.08
PIKFYVE-206ENST00000443896 IL27Q8NEV9 243 aa21.77■■□□□ 1.08
PIKFYVE-206ENST00000443896 MYOM1P52179 1685 aa21.77■■□□□ 1.07
PIKFYVE-206ENST00000443896 GGT6Q6P531 493 aa21.75■■□□□ 1.07
PIKFYVE-206ENST00000443896 SLC24A1O60721 1099 aa21.74■■□□□ 1.07
PIKFYVE-206ENST00000443896 DIP2CQ9Y2E4 1556 aa21.74■■□□□ 1.07
PIKFYVE-206ENST00000443896 KDM5AP29375 1690 aaKnown RBP21.74■■□□□ 1.07
PIKFYVE-206ENST00000443896 SENP3-EIF4A1A0A087X0R7 540 aa21.74■■□□□ 1.07
PIKFYVE-206ENST00000443896 RAPGEF3O95398 923 aa21.74■■□□□ 1.07
PIKFYVE-206ENST00000443896 KNSTRNQ9Y448 316 aa21.73■■□□□ 1.07
PIKFYVE-206ENST00000443896 NOS1P29475 1434 aa21.73■■□□□ 1.07
PIKFYVE-206ENST00000443896 SETBP1Q9Y6X0 1596 aa21.73■■□□□ 1.07
PIKFYVE-206ENST00000443896 BLMP54132 1417 aaPredicted RBP21.73■■□□□ 1.07
PIKFYVE-206ENST00000443896 CAMSAP1Q5T5Y3 1602 aa21.72■■□□□ 1.07
PIKFYVE-206ENST00000443896 MYO3AQ8NEV4 1616 aa21.72■■□□□ 1.07
PIKFYVE-206ENST00000443896 RICTORQ6R327 1708 aa21.72■■□□□ 1.07
PIKFYVE-206ENST00000443896 PPLO60437 1756 aa21.72■■□□□ 1.07
PIKFYVE-206ENST00000443896 AMER1Q5JTC6 1135 aaPredicted RBP21.72■■□□□ 1.07
PIKFYVE-206ENST00000443896 FANCIQ9NVI1 1328 aa21.72■■□□□ 1.07
PIKFYVE-206ENST00000443896 ERVK-7P63135 1459 aa21.71■■□□□ 1.07
PIKFYVE-206ENST00000443896 ASXL1Q8IXJ9 1541 aa21.71■■□□□ 1.07
PIKFYVE-206ENST00000443896 NPC1L1Q9UHC9 1359 aa21.69■■□□□ 1.06
PIKFYVE-206ENST00000443896 PIK3C2GO75747 1445 aa21.69■■□□□ 1.06
PIKFYVE-206ENST00000443896 SBNO2Q9Y2G9 1366 aa21.69■■□□□ 1.06
PIKFYVE-206ENST00000443896 PDE3BQ13370 1112 aa21.68■■□□□ 1.06
PIKFYVE-206ENST00000443896 GLI2P10070 1586 aa21.68■■□□□ 1.06
PIKFYVE-206ENST00000443896 CFAP65Q6ZU64 1925 aaKnown RBP21.68■■□□□ 1.06
PIKFYVE-206ENST00000443896 SIGLEC1Q9BZZ2 1709 aa21.67■■□□□ 1.06
PIKFYVE-206ENST00000443896 RPGRIP1LQ68CZ1 1315 aa21.67■■□□□ 1.06
PIKFYVE-206ENST00000443896 PIK3C2BO00750 1634 aa21.67■■□□□ 1.06
PIKFYVE-206ENST00000443896 PAK3O75914 559 aaPredicted RBP21.67■■□□□ 1.06
PIKFYVE-206ENST00000443896 CHGAP10645 457 aaKnown RBP21.67■■□□□ 1.06
PIKFYVE-206ENST00000443896 PPP2R1AP30153 589 aa21.66■■□□□ 1.06
PIKFYVE-206ENST00000443896 B4GALNT3Q6L9W6 998 aa21.65■■□□□ 1.06
PIKFYVE-206ENST00000443896 ZC3H13Q5T200 1668 aaKnown RBP21.65■■□□□ 1.06
PIKFYVE-206ENST00000443896 ARHGAP31Q2M1Z3 1444 aa21.65■■□□□ 1.06
PIKFYVE-206ENST00000443896 C14orf93Q9H972 538 aaKnown RBP21.64■■□□□ 1.06
PIKFYVE-206ENST00000443896 ADGRB1O14514 1584 aa21.64■■□□□ 1.05
PIKFYVE-206ENST00000443896 YEATS2Q9ULM3 1422 aa21.61■■□□□ 1.05
PIKFYVE-206ENST00000443896 CENPJQ9HC77 1338 aaPredicted RBP21.6■■□□□ 1.05
PIKFYVE-206ENST00000443896 CYB5RLQ6IPT4 315 aa21.59■■□□□ 1.05
PIKFYVE-206ENST00000443896 ADAMTS8Q9UP79 889 aa21.58■■□□□ 1.05
PIKFYVE-206ENST00000443896 NEXMIFQ5QGS0 1516 aa21.58■■□□□ 1.04
PIKFYVE-206ENST00000443896 EIF5BO60841 1220 aaKnown RBP21.57■■□□□ 1.04
PIKFYVE-206ENST00000443896 QRICH2Q9H0J4 1663 aa21.56■■□□□ 1.04
PIKFYVE-206ENST00000443896 RCAN3Q9UKA8 241 aa21.56■■□□□ 1.04
PIKFYVE-206ENST00000443896 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
PIKFYVE-206ENST00000443896 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
PIKFYVE-206ENST00000443896 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
PIKFYVE-206ENST00000443896 RRP1P56182 461 aaKnown RBP21.55■■□□□ 1.04
PIKFYVE-206ENST00000443896 CARD14Q9BXL6 1004 aa21.55■■□□□ 1.04
PIKFYVE-206ENST00000443896 TRAK1Q9UPV9 953 aa21.55■■□□□ 1.04
PIKFYVE-206ENST00000443896 CDCA7LQ96GN5 454 aa21.54■■□□□ 1.04
PIKFYVE-206ENST00000443896 WDR43Q15061 677 aaKnown RBP eCLIP21.54■■□□□ 1.04
PIKFYVE-206ENST00000443896 VGFO15240 615 aaPredicted RBP21.53■■□□□ 1.04
PIKFYVE-206ENST00000443896 NOP58Q9Y2X3 529 aaKnown RBP21.53■■□□□ 1.04
PIKFYVE-206ENST00000443896 DIP2BQ9P265 1576 aa21.53■■□□□ 1.04
PIKFYVE-206ENST00000443896 TMEM132EQ6IEE7 984 aa21.51■■□□□ 1.03
PIKFYVE-206ENST00000443896 SLC52A1Q9NWF4 448 aa21.51■■□□□ 1.03
PIKFYVE-206ENST00000443896 ZFYVE9O95405 1425 aa21.51■■□□□ 1.03
PIKFYVE-206ENST00000443896 IDI1Q13907 227 aa21.51■■□□□ 1.03
PIKFYVE-206ENST00000443896 PREX1Q8TCU6 1659 aa21.5■■□□□ 1.03
PIKFYVE-206ENST00000443896 RTL5Q5HYW3 569 aaPredicted RBP21.49■■□□□ 1.03
PIKFYVE-206ENST00000443896 FAM69CQ0P6D2 419 aa21.49■■□□□ 1.03
PIKFYVE-206ENST00000443896 ARHGEF28Q8N1W1 1705 aaKnown RBP21.48■■□□□ 1.03
PIKFYVE-206ENST00000443896 TMEM131LA2VDJ0 1609 aa21.46■■□□□ 1.03
PIKFYVE-206ENST00000443896 PLEKHH1Q9ULM0 1364 aa21.46■■□□□ 1.03
PIKFYVE-206ENST00000443896 NUTM2DQ5VT03 806 aaPredicted RBP21.45■■□□□ 1.02
PIKFYVE-206ENST00000443896 PUS7Q96PZ0 661 aaKnown RBP21.45■■□□□ 1.02
PIKFYVE-206ENST00000443896 ZNF521Q96K83 1311 aa21.45■■□□□ 1.02
PIKFYVE-206ENST00000443896 REREQ9P2R6 1566 aa21.45■■□□□ 1.02
PIKFYVE-206ENST00000443896 NSD3Q9BZ95 1437 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms