RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 ZC3H13Q5T200 1668 aaKnown RBP11.95□□□□□ -0.5
RER1-205ENST00000443438 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
RER1-205ENST00000443438 MROH2AA6NES4 1674 aa11.94□□□□□ -0.5
RER1-205ENST00000443438 SYNMO15061 1565 aa11.94□□□□□ -0.5
RER1-205ENST00000443438 IFT172Q9UG01 1749 aa11.94□□□□□ -0.5
RER1-205ENST00000443438 PIK3C2BO00750 1634 aa11.93□□□□□ -0.5
RER1-205ENST00000443438 TESK2Q96S53 571 aa11.93□□□□□ -0.5
RER1-205ENST00000443438 KIF1BO60333 1816 aa11.93□□□□□ -0.5
RER1-205ENST00000443438 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
RER1-205ENST00000443438 KIAA1210Q9ULL0 1709 aa11.91□□□□□ -0.5
RER1-205ENST00000443438 ARHGEF40Q8TER5 1519 aa11.91□□□□□ -0.5
RER1-205ENST00000443438 RPGRIP1LQ68CZ1 1315 aa11.9□□□□□ -0.5
RER1-205ENST00000443438 IQGAP1P46940 1657 aa11.9□□□□□ -0.5
RER1-205ENST00000443438 PRKRIP1Q9H875 184 aaPredicted RBP11.89□□□□□ -0.51
RER1-205ENST00000443438 SCAF11Q99590 1463 aaKnown RBP11.89□□□□□ -0.51
RER1-205ENST00000443438 IDI1Q13907 227 aa11.88□□□□□ -0.51
RER1-205ENST00000443438 CFAP70Q5T0N1 1121 aa11.88□□□□□ -0.51
RER1-205ENST00000443438 SLC52A1Q9NWF4 448 aa11.87□□□□□ -0.51
RER1-205ENST00000443438 DISP3Q9P2K9 1392 aa11.87□□□□□ -0.51
RER1-205ENST00000443438 PREX1Q8TCU6 1659 aa11.87□□□□□ -0.51
RER1-205ENST00000443438 PPLO60437 1756 aa11.87□□□□□ -0.51
RER1-205ENST00000443438 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
RER1-205ENST00000443438 FBXO31Q5XUX0 539 aaPredicted RBP11.86□□□□□ -0.51
RER1-205ENST00000443438 C14orf93Q9H972 538 aaKnown RBP11.86□□□□□ -0.51
RER1-205ENST00000443438 ERVK-7P63135 1459 aa11.86□□□□□ -0.51
RER1-205ENST00000443438 NEXMIFQ5QGS0 1516 aa11.86□□□□□ -0.51
RER1-205ENST00000443438 PIK3C2GO75747 1445 aa11.86□□□□□ -0.51
RER1-205ENST00000443438 MSH5O43196 834 aa11.85□□□□□ -0.51
RER1-205ENST00000443438 CHGAP10645 457 aaKnown RBP11.85□□□□□ -0.51
RER1-205ENST00000443438 CFAP65Q6ZU64 1925 aaKnown RBP11.85□□□□□ -0.51
RER1-205ENST00000443438 CCDC184Q52MB2 194 aa11.84□□□□□ -0.51
RER1-205ENST00000443438 ZFYVE9O95405 1425 aa11.84□□□□□ -0.51
RER1-205ENST00000443438 SETBP1Q9Y6X0 1596 aa11.84□□□□□ -0.51
RER1-205ENST00000443438 TMEM131LA2VDJ0 1609 aa11.83□□□□□ -0.52
RER1-205ENST00000443438 POLR3GLQ9BT43 218 aa11.83□□□□□ -0.52
RER1-205ENST00000443438 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
RER1-205ENST00000443438 ADGRB1O14514 1584 aa11.83□□□□□ -0.52
RER1-205ENST00000443438 SPATA31D1Q6ZQQ2 1576 aa11.83□□□□□ -0.52
RER1-205ENST00000443438 PER1O15534 1290 aaPredicted RBP11.82□□□□□ -0.52
RER1-205ENST00000443438 TMF1P82094 1093 aa11.82□□□□□ -0.52
RER1-205ENST00000443438 MLECQ14165 292 aa11.8□□□□□ -0.52
RER1-205ENST00000443438 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
RER1-205ENST00000443438 MYO3AQ8NEV4 1616 aa11.79□□□□□ -0.52
RER1-205ENST00000443438 VGFO15240 615 aaPredicted RBP11.79□□□□□ -0.52
RER1-205ENST00000443438 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
RER1-205ENST00000443438 A2ML1A8K2U0 1454 aa11.77□□□□□ -0.52
RER1-205ENST00000443438 NUTM2DQ5VT03 806 aaPredicted RBP11.77□□□□□ -0.53
RER1-205ENST00000443438 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.53
RER1-205ENST00000443438 SBNO2Q9Y2G9 1366 aa11.77□□□□□ -0.53
RER1-205ENST00000443438 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
RER1-205ENST00000443438 PANK3Q9H999 370 aa11.76□□□□□ -0.53
RER1-205ENST00000443438 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
RER1-205ENST00000443438 KTN1Q86UP2 1357 aaKnown RBP11.76□□□□□ -0.53
RER1-205ENST00000443438 ASXL1Q8IXJ9 1541 aa11.76□□□□□ -0.53
RER1-205ENST00000443438 RALBP1Q15311 655 aa11.75□□□□□ -0.53
RER1-205ENST00000443438 CDCA8Q53HL2 280 aa11.75□□□□□ -0.53
RER1-205ENST00000443438 GTF3C3Q9Y5Q9 886 aa11.75□□□□□ -0.53
RER1-205ENST00000443438 PARD3Q8TEW0 1356 aa11.75□□□□□ -0.53
RER1-205ENST00000443438 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
RER1-205ENST00000443438 MRS2Q9HD23 443 aa11.74□□□□□ -0.53
RER1-205ENST00000443438 CENPJQ9HC77 1338 aaPredicted RBP11.74□□□□□ -0.53
RER1-205ENST00000443438 TRAK1Q9UPV9 953 aa11.73□□□□□ -0.53
RER1-205ENST00000443438 MYOM1P52179 1685 aa11.72□□□□□ -0.53
RER1-205ENST00000443438 RIMS2Q9UQ26 1411 aa11.71□□□□□ -0.53
RER1-205ENST00000443438 TNRQ92752 1358 aa11.71□□□□□ -0.53
RER1-205ENST00000443438 MYBBP1AQ9BQG0 1328 aaKnown RBP11.71□□□□□ -0.53
RER1-205ENST00000443438 KCNA4P22459 653 aa11.7□□□□□ -0.54
RER1-205ENST00000443438 PNISRQ8TF01 805 aaKnown RBP11.7□□□□□ -0.54
RER1-205ENST00000443438 ESF1Q9H501 851 aaKnown RBP11.7□□□□□ -0.54
RER1-205ENST00000443438 ALKQ9UM73 1620 aa11.7□□□□□ -0.54
RER1-205ENST00000443438 PTPRMP28827 1452 aa11.7□□□□□ -0.54
RER1-205ENST00000443438 ARHGEF28Q8N1W1 1705 aaKnown RBP11.69□□□□□ -0.54
RER1-205ENST00000443438 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
RER1-205ENST00000443438 KDM5AP29375 1690 aaKnown RBP11.69□□□□□ -0.54
RER1-205ENST00000443438 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
RER1-205ENST00000443438 PUS7Q96PZ0 661 aaKnown RBP11.69□□□□□ -0.54
RER1-205ENST00000443438 QRICH2Q9H0J4 1663 aa11.68□□□□□ -0.54
RER1-205ENST00000443438 CNGB1Q14028 1251 aaPredicted RBP11.68□□□□□ -0.54
RER1-205ENST00000443438 FAM9BQ8IZU0 186 aa11.68□□□□□ -0.54
RER1-205ENST00000443438 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
RER1-205ENST00000443438 YTHDC2Q9H6S0 1430 aaKnown RBP11.68□□□□□ -0.54
RER1-205ENST00000443438 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
RER1-205ENST00000443438 TULP4Q9NRJ4 1543 aa11.67□□□□□ -0.54
RER1-205ENST00000443438 SETD1AO15047 1707 aaKnown RBP11.67□□□□□ -0.54
RER1-205ENST00000443438 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
RER1-205ENST00000443438 CARD14Q9BXL6 1004 aa11.67□□□□□ -0.54
RER1-205ENST00000443438 LRPPRCP42704 1394 aaKnown RBP11.67□□□□□ -0.54
RER1-205ENST00000443438 CC2D1BQ5T0F9 858 aaKnown RBP11.66□□□□□ -0.54
RER1-205ENST00000443438 NRXN3Q9Y4C0 1643 aa11.66□□□□□ -0.54
RER1-205ENST00000443438 CEBPAP49715 358 aaPredicted RBP11.65□□□□□ -0.54
RER1-205ENST00000443438 NLRP13Q86W25 1043 aa11.65□□□□□ -0.54
RER1-205ENST00000443438 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.65□□□□□ -0.54
RER1-205ENST00000443438 UBR1Q8IWV7 1749 aa11.65□□□□□ -0.54
RER1-205ENST00000443438 TMEM2Q9UHN6 1383 aa11.65□□□□□ -0.55
RER1-205ENST00000443438 DLC1Q96QB1 1528 aa11.65□□□□□ -0.55
RER1-205ENST00000443438 NLRP1Q9C000 1473 aa11.64□□□□□ -0.55
RER1-205ENST00000443438 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
RER1-205ENST00000443438 STK26Q9P289 416 aa11.64□□□□□ -0.55
RER1-205ENST00000443438 KNSTRNQ9Y448 316 aa11.64□□□□□ -0.55
RER1-205ENST00000443438 C3P01024 1663 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms