RNA–Protein interactions for RNA: ENST00000443002.5

POLR2F-206, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2

Gene POLR2F, Length 1,890 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-206ENST00000443002 KIF1BO60333 1816 aa29.73■■■□□ 2.35
POLR2F-206ENST00000443002 MAP3K4Q9Y6R4 1608 aa29.73■■■□□ 2.35
POLR2F-206ENST00000443002 POGZQ7Z3K3 1410 aa29.72■■■□□ 2.35
POLR2F-206ENST00000443002 CD109Q6YHK3 1445 aa29.71■■■□□ 2.35
POLR2F-206ENST00000443002 PPRC1Q5VV67 1664 aaKnown RBP29.69■■■□□ 2.34
POLR2F-206ENST00000443002 NPC1L1Q9UHC9 1359 aa29.69■■■□□ 2.34
POLR2F-206ENST00000443002 BLMP54132 1417 aaPredicted RBP29.68■■■□□ 2.34
POLR2F-206ENST00000443002 IFT172Q9UG01 1749 aa29.68■■■□□ 2.34
POLR2F-206ENST00000443002 NRXN1Q9ULB1 1477 aa29.68■■■□□ 2.34
POLR2F-206ENST00000443002 CC2D1BQ5T0F9 858 aaKnown RBP29.65■■■□□ 2.34
POLR2F-206ENST00000443002 KNSTRNQ9Y448 316 aa29.64■■■□□ 2.34
POLR2F-206ENST00000443002 HECW2Q9P2P5 1572 aa29.64■■■□□ 2.34
POLR2F-206ENST00000443002 ABCA6Q8N139 1617 aa29.62■■■□□ 2.33
POLR2F-206ENST00000443002 NEO1Q92859 1461 aa29.62■■■□□ 2.33
POLR2F-206ENST00000443002 ADGRB3O60242 1522 aa29.61■■■□□ 2.33
POLR2F-206ENST00000443002 B4GALNT3Q6L9W6 998 aa29.61■■■□□ 2.33
POLR2F-206ENST00000443002 ASXL1Q8IXJ9 1541 aa29.6■■■□□ 2.33
POLR2F-206ENST00000443002 KDM5AP29375 1690 aaKnown RBP29.6■■■□□ 2.33
POLR2F-206ENST00000443002 SBNO2Q9Y2G9 1366 aa29.59■■■□□ 2.33
POLR2F-206ENST00000443002 FRMPD1Q5SYB0 1578 aa29.59■■■□□ 2.33
POLR2F-206ENST00000443002 SETBP1Q9Y6X0 1596 aa29.59■■■□□ 2.33
POLR2F-206ENST00000443002 AMER1Q5JTC6 1135 aaPredicted RBP29.59■■■□□ 2.33
POLR2F-206ENST00000443002 UGGT1Q9NYU2 1555 aa29.58■■■□□ 2.33
POLR2F-206ENST00000443002 FANCIQ9NVI1 1328 aa29.58■■■□□ 2.33
POLR2F-206ENST00000443002 MYO3AQ8NEV4 1616 aa29.57■■■□□ 2.32
POLR2F-206ENST00000443002 MYOM1P52179 1685 aa29.57■■■□□ 2.32
POLR2F-206ENST00000443002 PIK3C2GO75747 1445 aa29.55■■■□□ 2.32
POLR2F-206ENST00000443002 MROH2AA6NES4 1674 aa29.54■■■□□ 2.32
POLR2F-206ENST00000443002 RPGRIP1LQ68CZ1 1315 aa29.54■■■□□ 2.32
POLR2F-206ENST00000443002 ADGRF5Q8IZF2 1346 aa29.54■■■□□ 2.32
POLR2F-206ENST00000443002 NPATQ14207 1427 aa29.53■■■□□ 2.32
POLR2F-206ENST00000443002 PPP2R1AP30153 589 aa29.52■■■□□ 2.32
POLR2F-206ENST00000443002 CFAP70Q5T0N1 1121 aa29.52■■■□□ 2.32
POLR2F-206ENST00000443002 RCAN3Q9UKA8 241 aa29.52■■■□□ 2.32
POLR2F-206ENST00000443002 RRP1P56182 461 aaKnown RBP29.51■■■□□ 2.31
POLR2F-206ENST00000443002 ERVK-7P63135 1459 aa29.5■■■□□ 2.31
POLR2F-206ENST00000443002 ABCC3O15438 1527 aa29.49■■■□□ 2.31
POLR2F-206ENST00000443002 CCDC136Q96JN2 1154 aa29.48■■■□□ 2.31
POLR2F-206ENST00000443002 ANP32EQ9BTT0 268 aa29.48■■■□□ 2.31
POLR2F-206ENST00000443002 PPLO60437 1756 aa29.46■■■□□ 2.31
POLR2F-206ENST00000443002 NOS1P29475 1434 aa29.45■■■□□ 2.31
POLR2F-206ENST00000443002 C14orf93Q9H972 538 aaKnown RBP29.43■■■□□ 2.3
POLR2F-206ENST00000443002 ARHGAP31Q2M1Z3 1444 aa29.41■■■□□ 2.3
POLR2F-206ENST00000443002 WDR43Q15061 677 aaKnown RBP eCLIP29.41■■■□□ 2.3
POLR2F-206ENST00000443002 ADAMTS8Q9UP79 889 aa29.41■■■□□ 2.3
POLR2F-206ENST00000443002 CAMSAP1Q5T5Y3 1602 aa29.41■■■□□ 2.3
POLR2F-206ENST00000443002 GGT6Q6P531 493 aa29.39■■■□□ 2.3
POLR2F-206ENST00000443002 ZC3H13Q5T200 1668 aaKnown RBP29.38■■■□□ 2.29
POLR2F-206ENST00000443002 PIK3C2BO00750 1634 aa29.38■■■□□ 2.29
POLR2F-206ENST00000443002 CENPJQ9HC77 1338 aaPredicted RBP29.38■■■□□ 2.29
POLR2F-206ENST00000443002 DIP2CQ9Y2E4 1556 aa29.38■■■□□ 2.29
POLR2F-206ENST00000443002 SENP3-EIF4A1A0A087X0R7 540 aa29.37■■■□□ 2.29
POLR2F-206ENST00000443002 ADGRB1O14514 1584 aa29.37■■■□□ 2.29
POLR2F-206ENST00000443002 PUS7Q96PZ0 661 aaKnown RBP29.36■■■□□ 2.29
POLR2F-206ENST00000443002 CDCA7LQ96GN5 454 aa29.34■■■□□ 2.29
POLR2F-206ENST00000443002 SALL2Q9Y467 1007 aaPredicted RBP29.34■■■□□ 2.29
POLR2F-206ENST00000443002 RICTORQ6R327 1708 aa29.34■■■□□ 2.29
POLR2F-206ENST00000443002 NGEFQ8N5V2 710 aa29.34■■■□□ 2.29
POLR2F-206ENST00000443002 GLI2P10070 1586 aa29.33■■■□□ 2.29
POLR2F-206ENST00000443002 CHGAP10645 457 aaKnown RBP29.31■■■□□ 2.28
POLR2F-206ENST00000443002 ZNF521Q96K83 1311 aa29.31■■■□□ 2.28
POLR2F-206ENST00000443002 VGFO15240 615 aaPredicted RBP29.29■■■□□ 2.28
POLR2F-206ENST00000443002 ZFYVE9O95405 1425 aa29.28■■■□□ 2.28
POLR2F-206ENST00000443002 RAPGEF3O95398 923 aa29.27■■■□□ 2.28
POLR2F-206ENST00000443002 CARD14Q9BXL6 1004 aa29.27■■■□□ 2.28
POLR2F-206ENST00000443002 SIGLEC1Q9BZZ2 1709 aa29.27■■■□□ 2.28
POLR2F-206ENST00000443002 QRICH2Q9H0J4 1663 aa29.27■■■□□ 2.28
POLR2F-206ENST00000443002 EXOC6Q8TAG9 804 aa29.25■■■□□ 2.27
POLR2F-206ENST00000443002 SLC52A1Q9NWF4 448 aa29.25■■■□□ 2.27
POLR2F-206ENST00000443002 NEXMIFQ5QGS0 1516 aa29.24■■■□□ 2.27
POLR2F-206ENST00000443002 PLEKHH1Q9ULM0 1364 aa29.24■■■□□ 2.27
POLR2F-206ENST00000443002 USP32Q8NFA0 1604 aa29.23■■■□□ 2.27
POLR2F-206ENST00000443002 POLR3AO14802 1390 aaPredicted RBP29.23■■■□□ 2.27
POLR2F-206ENST00000443002 CFAP65Q6ZU64 1925 aaKnown RBP29.23■■■□□ 2.27
POLR2F-206ENST00000443002 GOLGA2Q08379 1002 aa29.23■■■□□ 2.27
POLR2F-206ENST00000443002 TRAK1Q9UPV9 953 aa29.21■■■□□ 2.27
POLR2F-206ENST00000443002 MSH5O43196 834 aa29.2■■■□□ 2.26
POLR2F-206ENST00000443002 DUSP27Q5VZP5 1158 aa29.2■■■□□ 2.26
POLR2F-206ENST00000443002 TRMT2AQ8IZ69 625 aaKnown RBP29.17■■■□□ 2.26
POLR2F-206ENST00000443002 SLFN5Q08AF3 891 aa29.15■■■□□ 2.26
POLR2F-206ENST00000443002 TCERG1O14776 1098 aaKnown RBP29.14■■■□□ 2.26
POLR2F-206ENST00000443002 EVC2Q86UK5 1308 aa29.14■■■□□ 2.26
POLR2F-206ENST00000443002 NSD3Q9BZ95 1437 aa29.14■■■□□ 2.25
POLR2F-206ENST00000443002 ARHGEF28Q8N1W1 1705 aaKnown RBP29.14■■■□□ 2.25
POLR2F-206ENST00000443002 YEATS2Q9ULM3 1422 aa29.13■■■□□ 2.25
POLR2F-206ENST00000443002 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.12■■■□□ 2.25
POLR2F-206ENST00000443002 NSD2O96028 1365 aa29.11■■■□□ 2.25
POLR2F-206ENST00000443002 IDI1Q13907 227 aa29.11■■■□□ 2.25
POLR2F-206ENST00000443002 TMEM132EQ6IEE7 984 aa29.1■■■□□ 2.25
POLR2F-206ENST00000443002 NINLQ9Y2I6 1382 aa29.1■■■□□ 2.25
POLR2F-206ENST00000443002 PPP6R1Q9UPN7 881 aa29.1■■■□□ 2.25
POLR2F-206ENST00000443002 PREX1Q8TCU6 1659 aa29.1■■■□□ 2.25
POLR2F-206ENST00000443002 REREQ9P2R6 1566 aa29.09■■■□□ 2.25
POLR2F-206ENST00000443002 MS4A1P11836 297 aa29.09■■■□□ 2.25
POLR2F-206ENST00000443002 MORC1Q86VD1 984 aa29.08■■■□□ 2.25
POLR2F-206ENST00000443002 CGNL1Q0VF96 1302 aa29.07■■■□□ 2.24
POLR2F-206ENST00000443002 E9PSI1 815 aa29.07■■■□□ 2.24
POLR2F-206ENST00000443002 SLC12A5Q9H2X9 1139 aa29.07■■■□□ 2.24
POLR2F-206ENST00000443002 ANKRD36BQ8N2N9 1353 aa29.07■■■□□ 2.24
POLR2F-206ENST00000443002 TMEM131LA2VDJ0 1609 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms