RNA–Protein interactions for RNA: ENST00000442419.1

SNHG11-210, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 3

Gene SNHG11, Length 741 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-210ENST00000442419 COL16A1Q07092 1604 aaPredicted RBP17.68■□□□□ 0.42
SNHG11-210ENST00000442419 LRP6O75581 1613 aa17.67■□□□□ 0.42
SNHG11-210ENST00000442419 NCOA3Q9Y6Q9 1424 aa17.66■□□□□ 0.42
SNHG11-210ENST00000442419 ADGRB3O60242 1522 aa17.66■□□□□ 0.42
SNHG11-210ENST00000442419 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.42
SNHG11-210ENST00000442419 NOS1P29475 1434 aa17.64■□□□□ 0.42
SNHG11-210ENST00000442419 CDK12Q9NYV4 1490 aaPredicted RBP17.64■□□□□ 0.41
SNHG11-210ENST00000442419 MEX3CQ5U5Q3 659 aaKnown RBP17.64■□□□□ 0.41
SNHG11-210ENST00000442419 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
SNHG11-210ENST00000442419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNHG11-210ENST00000442419 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
SNHG11-210ENST00000442419 PCGF6Q9BYE7 350 aa17.62■□□□□ 0.41
SNHG11-210ENST00000442419 PLEKHG1Q9ULL1 1385 aa17.62■□□□□ 0.41
SNHG11-210ENST00000442419 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
SNHG11-210ENST00000442419 RXRBP28702 533 aa17.61■□□□□ 0.41
SNHG11-210ENST00000442419 RRP7BPQ9NSQ0 103 aa17.61■□□□□ 0.41
SNHG11-210ENST00000442419 ABCC5O15440 1437 aa17.61■□□□□ 0.41
SNHG11-210ENST00000442419 BCANQ96GW7 911 aa17.6■□□□□ 0.41
SNHG11-210ENST00000442419 SHPRHQ149N8 1683 aa17.59■□□□□ 0.41
SNHG11-210ENST00000442419 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
SNHG11-210ENST00000442419 CADPS2Q86UW7 1296 aa17.58■□□□□ 0.4
SNHG11-210ENST00000442419 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
SNHG11-210ENST00000442419 TBX22Q9Y458 520 aa17.57■□□□□ 0.4
SNHG11-210ENST00000442419 CROCC2H7BZ55 1655 aa17.57■□□□□ 0.4
SNHG11-210ENST00000442419 CHD2O14647 1828 aaKnown RBP17.56■□□□□ 0.4
SNHG11-210ENST00000442419 PTPN23Q9H3S7 1636 aa17.55■□□□□ 0.4
SNHG11-210ENST00000442419 C19orf44Q9H6X5 657 aa17.55■□□□□ 0.4
SNHG11-210ENST00000442419 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
SNHG11-210ENST00000442419 DAPK1P53355 1430 aa17.55■□□□□ 0.4
SNHG11-210ENST00000442419 PPP1R15AO75807 674 aaPredicted RBP17.54■□□□□ 0.4
SNHG11-210ENST00000442419 RIMS2Q9UQ26 1411 aa17.54■□□□□ 0.4
SNHG11-210ENST00000442419 PIK3R4Q99570 1358 aa17.53■□□□□ 0.4
SNHG11-210ENST00000442419 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
SNHG11-210ENST00000442419 ATF3P18847 181 aa17.53■□□□□ 0.4
SNHG11-210ENST00000442419 C14orf37Q86TY3 774 aa17.53■□□□□ 0.4
SNHG11-210ENST00000442419 DIP2AQ14689 1571 aa17.53■□□□□ 0.4
SNHG11-210ENST00000442419 FAM50AQ14320 339 aaKnown RBP17.51■□□□□ 0.39
SNHG11-210ENST00000442419 BRINP3Q76B58 766 aa17.5■□□□□ 0.39
SNHG11-210ENST00000442419 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNHG11-210ENST00000442419 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.5■□□□□ 0.39
SNHG11-210ENST00000442419 AFF2P51816 1311 aa17.49■□□□□ 0.39
SNHG11-210ENST00000442419 DCCP43146 1447 aa17.49■□□□□ 0.39
SNHG11-210ENST00000442419 ADAMTS13Q76LX8 1427 aa17.49■□□□□ 0.39
SNHG11-210ENST00000442419 SETD5Q9C0A6 1442 aa17.48■□□□□ 0.39
SNHG11-210ENST00000442419 RGS12O14924 1447 aa17.47■□□□□ 0.39
SNHG11-210ENST00000442419 NUTM2BA6NNL0 878 aaPredicted RBP17.47■□□□□ 0.39
SNHG11-210ENST00000442419 NUTM2EB1AL46 878 aaPredicted RBP17.47■□□□□ 0.39
SNHG11-210ENST00000442419 NUTM2AQ8IVF1 878 aaPredicted RBP17.47■□□□□ 0.39
SNHG11-210ENST00000442419 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
SNHG11-210ENST00000442419 RBM6P78332 1123 aaKnown RBP17.46■□□□□ 0.39
SNHG11-210ENST00000442419 ASXL1Q8IXJ9 1541 aa17.44■□□□□ 0.38
SNHG11-210ENST00000442419 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
SNHG11-210ENST00000442419 GCC2Q8IWJ2 1684 aa17.43■□□□□ 0.38
SNHG11-210ENST00000442419 LRRC59Q96AG4 307 aaKnown RBP17.43■□□□□ 0.38
SNHG11-210ENST00000442419 CHIC2Q9UKJ5 165 aa17.43■□□□□ 0.38
SNHG11-210ENST00000442419 FOXD1Q16676 465 aa17.42■□□□□ 0.38
SNHG11-210ENST00000442419 QTRT2Q9H974 415 aaKnown RBP17.42■□□□□ 0.38
SNHG11-210ENST00000442419 TRPM2O94759 1503 aa17.42■□□□□ 0.38
SNHG11-210ENST00000442419 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
SNHG11-210ENST00000442419 MYO5BQ9ULV0 1848 aa17.4■□□□□ 0.38
SNHG11-210ENST00000442419 NGLY1Q96IV0 654 aa17.4■□□□□ 0.38
SNHG11-210ENST00000442419 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
SNHG11-210ENST00000442419 ATAD2Q6PL18 1390 aa17.4■□□□□ 0.38
SNHG11-210ENST00000442419 MST1RQ04912 1400 aa17.39■□□□□ 0.38
SNHG11-210ENST00000442419 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.38
SNHG11-210ENST00000442419 NHSL1Q5SYE7 1610 aa17.39■□□□□ 0.37
SNHG11-210ENST00000442419 ROCK1Q13464 1354 aa17.39■□□□□ 0.37
SNHG11-210ENST00000442419 PNPLA6Q8IY17 1366 aa17.39■□□□□ 0.37
SNHG11-210ENST00000442419 PTPRUQ92729 1446 aa17.38■□□□□ 0.37
SNHG11-210ENST00000442419 NUTM2DQ5VT03 806 aaPredicted RBP17.38■□□□□ 0.37
SNHG11-210ENST00000442419 CHGAP10645 457 aaKnown RBP17.37■□□□□ 0.37
SNHG11-210ENST00000442419 HRCP23327 699 aa17.36■□□□□ 0.37
SNHG11-210ENST00000442419 ITGAEP38570 1179 aa17.36■□□□□ 0.37
SNHG11-210ENST00000442419 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
SNHG11-210ENST00000442419 HFM1A2PYH4 1435 aa17.34■□□□□ 0.37
SNHG11-210ENST00000442419 UNC13BO14795 1591 aa17.34■□□□□ 0.37
SNHG11-210ENST00000442419 XRN1Q8IZH2 1706 aaKnown RBP17.33■□□□□ 0.37
SNHG11-210ENST00000442419 ADGRL3Q9HAR2 1447 aa17.31■□□□□ 0.36
SNHG11-210ENST00000442419 SETBP1Q9Y6X0 1596 aa17.31■□□□□ 0.36
SNHG11-210ENST00000442419 NAIPQ13075 1403 aa17.3■□□□□ 0.36
SNHG11-210ENST00000442419 CCDC125Q86Z20 511 aa17.3■□□□□ 0.36
SNHG11-210ENST00000442419 TRPC5Q9UL62 973 aaPredicted RBP17.3■□□□□ 0.36
SNHG11-210ENST00000442419 EP400Q96L91 3159 aa17.3■□□□□ 0.36
SNHG11-210ENST00000442419 PTCH1Q13635 1447 aa17.29■□□□□ 0.36
SNHG11-210ENST00000442419 ADAMTS2O95450 1211 aa17.28■□□□□ 0.36
SNHG11-210ENST00000442419 FNBP4Q8N3X1 1017 aaPredicted RBP17.28■□□□□ 0.36
SNHG11-210ENST00000442419 DDX17Q92841 729 aaKnown RBP17.28■□□□□ 0.36
SNHG11-210ENST00000442419 USP21Q9UK80 565 aa17.28■□□□□ 0.36
SNHG11-210ENST00000442419 NRXN3Q9Y4C0 1643 aa17.28■□□□□ 0.36
SNHG11-210ENST00000442419 ACIN1Q9UKV3 1341 aaKnown RBP17.27■□□□□ 0.36
SNHG11-210ENST00000442419 E9PCH4 1651 aa17.27■□□□□ 0.36
SNHG11-210ENST00000442419 LAMC1P11047 1609 aa17.27■□□□□ 0.36
SNHG11-210ENST00000442419 ATRNO75882 1429 aa17.26■□□□□ 0.35
SNHG11-210ENST00000442419 RAB3GAP2Q9H2M9 1393 aa17.26■□□□□ 0.35
SNHG11-210ENST00000442419 C1orf167Q5SNV9 1468 aa17.25■□□□□ 0.35
SNHG11-210ENST00000442419 SOS2Q07890 1332 aaPredicted RBP17.25■□□□□ 0.35
SNHG11-210ENST00000442419 METP08581 1390 aa17.25■□□□□ 0.35
SNHG11-210ENST00000442419 IQGAP3Q86VI3 1631 aa17.23■□□□□ 0.35
SNHG11-210ENST00000442419 NALCNQ8IZF0 1738 aa17.21■□□□□ 0.35
SNHG11-210ENST00000442419 MYOM2P54296 1465 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms