RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 MS4A1P11836 297 aa21.76■■□□□ 1.07
SEMA3B-207ENST00000441915 SYNMO15061 1565 aa21.76■■□□□ 1.07
SEMA3B-207ENST00000441915 PDE4AP27815 886 aa21.74■■□□□ 1.07
SEMA3B-207ENST00000441915 NBR1Q14596 966 aa21.74■■□□□ 1.07
SEMA3B-207ENST00000441915 CLTCL1P53675 1640 aa21.73■■□□□ 1.07
SEMA3B-207ENST00000441915 EIF3AQ14152 1382 aaKnown RBP21.73■■□□□ 1.07
SEMA3B-207ENST00000441915 KANK1Q14678 1352 aa21.73■■□□□ 1.07
SEMA3B-207ENST00000441915 DEPDC5O75140 1603 aa21.73■■□□□ 1.07
SEMA3B-207ENST00000441915 CRBNQ96SW2 442 aa21.73■■□□□ 1.07
SEMA3B-207ENST00000441915 CLASP1Q7Z460 1538 aa21.72■■□□□ 1.07
SEMA3B-207ENST00000441915 TET3O43151 1660 aa21.71■■□□□ 1.07
SEMA3B-207ENST00000441915 ASXL1Q8IXJ9 1541 aa21.71■■□□□ 1.07
SEMA3B-207ENST00000441915 BACH2Q9BYV9 841 aa21.71■■□□□ 1.07
SEMA3B-207ENST00000441915 DEKP35659 375 aaKnown RBP21.7■■□□□ 1.06
SEMA3B-207ENST00000441915 NPM2Q86SE8 214 aaKnown RBP21.7■■□□□ 1.06
SEMA3B-207ENST00000441915 PIK3C2GO75747 1445 aa21.69■■□□□ 1.06
SEMA3B-207ENST00000441915 NPC1L1Q9UHC9 1359 aa21.68■■□□□ 1.06
SEMA3B-207ENST00000441915 PLEKHH1Q9ULM0 1364 aa21.68■■□□□ 1.06
SEMA3B-207ENST00000441915 SLC24A1O60721 1099 aa21.68■■□□□ 1.06
SEMA3B-207ENST00000441915 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
SEMA3B-207ENST00000441915 DUSP27Q5VZP5 1158 aa21.67■■□□□ 1.06
SEMA3B-207ENST00000441915 ATP7AQ04656 1500 aa21.67■■□□□ 1.06
SEMA3B-207ENST00000441915 KIF3BO15066 747 aa21.66■■□□□ 1.06
SEMA3B-207ENST00000441915 KIAA1210Q9ULL0 1709 aa21.66■■□□□ 1.06
SEMA3B-207ENST00000441915 ZNF521Q96K83 1311 aa21.66■■□□□ 1.06
SEMA3B-207ENST00000441915 VWDEQ8N2E2 1590 aa21.65■■□□□ 1.06
SEMA3B-207ENST00000441915 FANCAO15360 1455 aa21.65■■□□□ 1.06
SEMA3B-207ENST00000441915 MYOM1P52179 1685 aa21.64■■□□□ 1.06
SEMA3B-207ENST00000441915 C20orf194Q5TEA3 1177 aa21.64■■□□□ 1.05
SEMA3B-207ENST00000441915 NEURL4Q96JN8 1562 aa21.64■■□□□ 1.05
SEMA3B-207ENST00000441915 INO80Q9ULG1 1556 aaPredicted RBP21.64■■□□□ 1.05
SEMA3B-207ENST00000441915 KDM5AP29375 1690 aaKnown RBP21.64■■□□□ 1.05
SEMA3B-207ENST00000441915 RTL5Q5HYW3 569 aaPredicted RBP21.63■■□□□ 1.05
SEMA3B-207ENST00000441915 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.63■■□□□ 1.05
SEMA3B-207ENST00000441915 ABCA9Q8IUA7 1624 aa21.61■■□□□ 1.05
SEMA3B-207ENST00000441915 CFAP70Q5T0N1 1121 aa21.61■■□□□ 1.05
SEMA3B-207ENST00000441915 MAP3K4Q9Y6R4 1608 aa21.59■■□□□ 1.05
SEMA3B-207ENST00000441915 ADGRL1O94910 1474 aa21.59■■□□□ 1.05
SEMA3B-207ENST00000441915 MYOM2P54296 1465 aa21.59■■□□□ 1.05
SEMA3B-207ENST00000441915 SLFN5Q08AF3 891 aa21.59■■□□□ 1.05
SEMA3B-207ENST00000441915 CENPQQ7L2Z9 268 aaPredicted RBP21.57■■□□□ 1.04
SEMA3B-207ENST00000441915 KDM2BQ8NHM5 1336 aa21.57■■□□□ 1.04
SEMA3B-207ENST00000441915 CCDC146Q8IYE0 955 aa21.57■■□□□ 1.04
SEMA3B-207ENST00000441915 ANO8Q9HCE9 1232 aaPredicted RBP21.57■■□□□ 1.04
SEMA3B-207ENST00000441915 ADGRF5Q8IZF2 1346 aa21.56■■□□□ 1.04
SEMA3B-207ENST00000441915 ERVK-7P63135 1459 aa21.56■■□□□ 1.04
SEMA3B-207ENST00000441915 KIF1BO60333 1816 aa21.55■■□□□ 1.04
SEMA3B-207ENST00000441915 UGGT1Q9NYU2 1555 aa21.55■■□□□ 1.04
SEMA3B-207ENST00000441915 SKAP1Q86WV1 359 aa21.55■■□□□ 1.04
SEMA3B-207ENST00000441915 ABCA6Q8N139 1617 aa21.55■■□□□ 1.04
SEMA3B-207ENST00000441915 MROH1Q8NDA8 1641 aa21.54■■□□□ 1.04
SEMA3B-207ENST00000441915 APAF1O14727 1248 aa21.54■■□□□ 1.04
SEMA3B-207ENST00000441915 TRMT2AQ8IZ69 625 aaKnown RBP21.54■■□□□ 1.04
SEMA3B-207ENST00000441915 EFCAB6Q5THR3 1501 aa21.52■■□□□ 1.04
SEMA3B-207ENST00000441915 NKTRP30414 1462 aaKnown RBP21.51■■□□□ 1.03
SEMA3B-207ENST00000441915 NGEFQ8N5V2 710 aa21.51■■□□□ 1.03
SEMA3B-207ENST00000441915 DDRGK1Q96HY6 314 aa21.51■■□□□ 1.03
SEMA3B-207ENST00000441915 CARD14Q9BXL6 1004 aa21.51■■□□□ 1.03
SEMA3B-207ENST00000441915 E9PSI1 815 aa21.5■■□□□ 1.03
SEMA3B-207ENST00000441915 SBNO2Q9Y2G9 1366 aa21.5■■□□□ 1.03
SEMA3B-207ENST00000441915 IFT172Q9UG01 1749 aa21.49■■□□□ 1.03
SEMA3B-207ENST00000441915 SPINK5Q9NQ38 1064 aaPredicted RBP21.49■■□□□ 1.03
SEMA3B-207ENST00000441915 NRXN1Q9ULB1 1477 aa21.47■■□□□ 1.03
SEMA3B-207ENST00000441915 MYO3AQ8NEV4 1616 aa21.46■■□□□ 1.03
SEMA3B-207ENST00000441915 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
SEMA3B-207ENST00000441915 MROH2AA6NES4 1674 aa21.45■■□□□ 1.03
SEMA3B-207ENST00000441915 PPRC1Q5VV67 1664 aaKnown RBP21.45■■□□□ 1.03
SEMA3B-207ENST00000441915 LAS1LQ9Y4W2 734 aaKnown RBP21.45■■□□□ 1.02
SEMA3B-207ENST00000441915 KIDINS220Q9ULH0 1771 aa21.45■■□□□ 1.02
SEMA3B-207ENST00000441915 USP35Q9P2H5 1018 aa21.45■■□□□ 1.02
SEMA3B-207ENST00000441915 LMTK2Q8IWU2 1503 aa21.44■■□□□ 1.02
SEMA3B-207ENST00000441915 PPM1GO15355 546 aaPredicted RBP21.44■■□□□ 1.02
SEMA3B-207ENST00000441915 ASXL2Q76L83 1435 aa21.44■■□□□ 1.02
SEMA3B-207ENST00000441915 POLR3AO14802 1390 aaPredicted RBP21.44■■□□□ 1.02
SEMA3B-207ENST00000441915 CHGAP10645 457 aaKnown RBP21.44■■□□□ 1.02
SEMA3B-207ENST00000441915 NOS1P29475 1434 aa21.43■■□□□ 1.02
SEMA3B-207ENST00000441915 FAM161AQ3B820 660 aa21.43■■□□□ 1.02
SEMA3B-207ENST00000441915 ZNF518AQ6AHZ1 1483 aa21.43■■□□□ 1.02
SEMA3B-207ENST00000441915 BCAR3O75815 825 aa21.43■■□□□ 1.02
SEMA3B-207ENST00000441915 NEFMP07197 916 aa21.42■■□□□ 1.02
SEMA3B-207ENST00000441915 SETBP1Q9Y6X0 1596 aa21.42■■□□□ 1.02
SEMA3B-207ENST00000441915 ADGRB3O60242 1522 aa21.41■■□□□ 1.02
SEMA3B-207ENST00000441915 TRAK1Q9UPV9 953 aa21.4■■□□□ 1.02
SEMA3B-207ENST00000441915 NSD3Q9BZ95 1437 aa21.39■■□□□ 1.01
SEMA3B-207ENST00000441915 MORC1Q86VD1 984 aa21.39■■□□□ 1.01
SEMA3B-207ENST00000441915 DMRT2Q9Y5R5 561 aa21.39■■□□□ 1.01
SEMA3B-207ENST00000441915 C8orf34Q49A92 452 aa21.38■■□□□ 1.01
SEMA3B-207ENST00000441915 WWC1Q8IX03 1113 aa21.38■■□□□ 1.01
SEMA3B-207ENST00000441915 C14orf93Q9H972 538 aaKnown RBP21.38■■□□□ 1.01
SEMA3B-207ENST00000441915 RGS3P49796 1198 aa21.37■■□□□ 1.01
SEMA3B-207ENST00000441915 PDE3AQ14432 1141 aa21.37■■□□□ 1.01
SEMA3B-207ENST00000441915 CGNL1Q0VF96 1302 aa21.36■■□□□ 1.01
SEMA3B-207ENST00000441915 DAXXQ9UER7 740 aaPredicted RBP21.36■■□□□ 1.01
SEMA3B-207ENST00000441915 NPATQ14207 1427 aa21.35■■□□□ 1.01
SEMA3B-207ENST00000441915 NINLQ9Y2I6 1382 aa21.35■■□□□ 1.01
SEMA3B-207ENST00000441915 SLC12A5Q9H2X9 1139 aa21.35■■□□□ 1.01
SEMA3B-207ENST00000441915 GGT6Q6P531 493 aa21.35■■□□□ 1.01
SEMA3B-207ENST00000441915 CANXP27824 592 aaKnown RBP21.34■■□□□ 1.01
SEMA3B-207ENST00000441915 TNNT2P45379 298 aaPredicted RBP21.34■■□□□ 1.01
SEMA3B-207ENST00000441915 PPLO60437 1756 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms