RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 RSPH4AQ5TD94 716 aa10.21□□□□□ -0.77
HDAC6-210ENST00000441703 CADPS2Q86UW7 1296 aa10.21□□□□□ -0.77
HDAC6-210ENST00000441703 CCDC125Q86Z20 511 aa10.21□□□□□ -0.77
HDAC6-210ENST00000441703 CEP152O94986 1710 aa10.2□□□□□ -0.78
HDAC6-210ENST00000441703 TSPY4P0CV99 314 aa10.2□□□□□ -0.78
HDAC6-210ENST00000441703 TSPY10P0CW01 314 aa10.2□□□□□ -0.78
HDAC6-210ENST00000441703 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
HDAC6-210ENST00000441703 PIK3C2BO00750 1634 aa10.19□□□□□ -0.78
HDAC6-210ENST00000441703 EIF2AK4Q9P2K8 1649 aaKnown RBP10.18□□□□□ -0.78
HDAC6-210ENST00000441703 EFCAB6Q5THR3 1501 aa10.18□□□□□ -0.78
HDAC6-210ENST00000441703 CAMSAP2Q08AD1 1489 aa10.18□□□□□ -0.78
HDAC6-210ENST00000441703 CEP162Q5TB80 1403 aa10.18□□□□□ -0.78
HDAC6-210ENST00000441703 TET3O43151 1660 aa10.18□□□□□ -0.78
HDAC6-210ENST00000441703 LRP5O75197 1615 aa10.18□□□□□ -0.78
HDAC6-210ENST00000441703 ARHGEF5Q12774 1597 aa10.18□□□□□ -0.78
HDAC6-210ENST00000441703 DIP2AQ14689 1571 aa10.18□□□□□ -0.78
HDAC6-210ENST00000441703 MROH1Q8NDA8 1641 aa10.17□□□□□ -0.78
HDAC6-210ENST00000441703 NCOA3Q9Y6Q9 1424 aa10.16□□□□□ -0.78
HDAC6-210ENST00000441703 TRPC5Q9UL62 973 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-210ENST00000441703 ADAMTS2O95450 1211 aa10.15□□□□□ -0.78
HDAC6-210ENST00000441703 MYT1Q01538 1121 aa10.15□□□□□ -0.78
HDAC6-210ENST00000441703 BRINP3Q76B58 766 aa10.15□□□□□ -0.78
HDAC6-210ENST00000441703 LRRC59Q96AG4 307 aaKnown RBP10.15□□□□□ -0.78
HDAC6-210ENST00000441703 C19orf44Q9H6X5 657 aa10.15□□□□□ -0.78
HDAC6-210ENST00000441703 MAST1Q9Y2H9 1570 aa10.14□□□□□ -0.79
HDAC6-210ENST00000441703 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-210ENST00000441703 PPP1R15AO75807 674 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-210ENST00000441703 SF3B2Q13435 895 aaKnown RBP10.14□□□□□ -0.79
HDAC6-210ENST00000441703 USP21Q9UK80 565 aa10.14□□□□□ -0.79
HDAC6-210ENST00000441703 ARHGAP31Q2M1Z3 1444 aa10.14□□□□□ -0.79
HDAC6-210ENST00000441703 SETD5Q9C0A6 1442 aa10.14□□□□□ -0.79
HDAC6-210ENST00000441703 CHD2O14647 1828 aaKnown RBP10.14□□□□□ -0.79
HDAC6-210ENST00000441703 YY1P25490 414 aa10.13□□□□□ -0.79
HDAC6-210ENST00000441703 IDI1Q13907 227 aa10.11□□□□□ -0.79
HDAC6-210ENST00000441703 ASXL1Q8IXJ9 1541 aa10.11□□□□□ -0.79
HDAC6-210ENST00000441703 PNPLA6Q8IY17 1366 aa10.11□□□□□ -0.79
HDAC6-210ENST00000441703 BLMP54132 1417 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-210ENST00000441703 HDGFP51858 240 aaKnown RBP10.1□□□□□ -0.79
HDAC6-210ENST00000441703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.1□□□□□ -0.792e-7■■□□□ 14.1
HDAC6-210ENST00000441703 ADGRB3O60242 1522 aa10.1□□□□□ -0.79
HDAC6-210ENST00000441703 NHSL1Q5SYE7 1610 aa10.09□□□□□ -0.79
HDAC6-210ENST00000441703 KANK1Q14678 1352 aa10.09□□□□□ -0.79
HDAC6-210ENST00000441703 PLEKHG1Q9ULL1 1385 aa10.09□□□□□ -0.79
HDAC6-210ENST00000441703 PSDA5PKW4 1024 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-210ENST00000441703 DEFB132Q7Z7B7 95 aa10.08□□□□□ -0.8
HDAC6-210ENST00000441703 TBX22Q9Y458 520 aa10.08□□□□□ -0.8
HDAC6-210ENST00000441703 ATRNO75882 1429 aa10.07□□□□□ -0.8
HDAC6-210ENST00000441703 DUOX2Q9NRD8 1548 aa10.07□□□□□ -0.8
HDAC6-210ENST00000441703 DCCP43146 1447 aa10.06□□□□□ -0.8
HDAC6-210ENST00000441703 FNBP4Q8N3X1 1017 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-210ENST00000441703 DDX17Q92841 729 aaKnown RBP10.05□□□□□ -0.8
HDAC6-210ENST00000441703 SLC52A1Q9NWF4 448 aa10.05□□□□□ -0.8
HDAC6-210ENST00000441703 PTCH1Q13635 1447 aa10.05□□□□□ -0.8
HDAC6-210ENST00000441703 RIMS2Q9UQ26 1411 aa10.05□□□□□ -0.8
HDAC6-210ENST00000441703 PIK3R4Q99570 1358 aa10.03□□□□□ -0.8
HDAC6-210ENST00000441703 DCAF8L1A6NGE4 600 aa10.03□□□□□ -0.8
HDAC6-210ENST00000441703 MST1RQ04912 1400 aa10.03□□□□□ -0.8
HDAC6-210ENST00000441703 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.03□□□□□ -0.8
HDAC6-210ENST00000441703 ERBINQ96RT1 1412 aa10.03□□□□□ -0.8
HDAC6-210ENST00000441703 CROCC2H7BZ55 1655 aa10.02□□□□□ -0.8
HDAC6-210ENST00000441703 ZFYVE9O95405 1425 aa10.02□□□□□ -0.81
HDAC6-210ENST00000441703 BAG6P46379 1132 aa10.02□□□□□ -0.81
HDAC6-210ENST00000441703 GJD4Q96KN9 370 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-210ENST00000441703 AMOTL2Q9Y2J4 779 aa10.02□□□□□ -0.81
HDAC6-210ENST00000441703 LMTK2Q8IWU2 1503 aa10.02□□□□□ -0.81
HDAC6-210ENST00000441703 KIF15Q9NS87 1388 aa10.01□□□□□ -0.81
HDAC6-210ENST00000441703 UNC13BO14795 1591 aa10.01□□□□□ -0.81
HDAC6-210ENST00000441703 EP400Q96L91 3159 aa10.01□□□□□ -0.81
HDAC6-210ENST00000441703 SENP3-EIF4A1A0A087X0R7 540 aa10.01□□□□□ -0.81
HDAC6-210ENST00000441703 CHGAP10645 457 aaKnown RBP10.01□□□□□ -0.81
HDAC6-210ENST00000441703 TRPM2O94759 1503 aa10.01□□□□□ -0.81
HDAC6-210ENST00000441703 NOS1P29475 1434 aa10□□□□□ -0.81
HDAC6-210ENST00000441703 ADAMTS13Q76LX8 1427 aa9.99□□□□□ -0.81
HDAC6-210ENST00000441703 MYO5BQ9ULV0 1848 aa9.99□□□□□ -0.81
HDAC6-210ENST00000441703 GCC2Q8IWJ2 1684 aa9.99□□□□□ -0.81
HDAC6-210ENST00000441703 BCL9LQ86UU0 1499 aa9.98□□□□□ -0.81
HDAC6-210ENST00000441703 R3HDM1Q15032 1099 aaKnown RBP9.98□□□□□ -0.81
HDAC6-210ENST00000441703 RRP7BPQ9NSQ0 103 aa9.98□□□□□ -0.81
HDAC6-210ENST00000441703 MYOM3Q5VTT5 1437 aa9.98□□□□□ -0.81
HDAC6-210ENST00000441703 SPHKAPQ2M3C7 1700 aa9.97□□□□□ -0.81
HDAC6-210ENST00000441703 RPRD2Q5VT52 1461 aaKnown RBP9.97□□□□□ -0.81
HDAC6-210ENST00000441703 PTPRUQ92729 1446 aa9.96□□□□□ -0.82
HDAC6-210ENST00000441703 RALGAPBQ86X10 1494 aa9.96□□□□□ -0.82
HDAC6-210ENST00000441703 BRWD3Q6RI45 1802 aa9.96□□□□□ -0.82
HDAC6-210ENST00000441703 SEPT12Q8IYM1 358 aa9.95□□□□□ -0.82
HDAC6-210ENST00000441703 SOS2Q07890 1332 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-210ENST00000441703 TMEM131LA2VDJ0 1609 aa9.94□□□□□ -0.82
HDAC6-210ENST00000441703 COL22A1Q8NFW1 1626 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-210ENST00000441703 C1orf167Q5SNV9 1468 aa9.94□□□□□ -0.82
HDAC6-210ENST00000441703 ADGRL3Q9HAR2 1447 aa9.94□□□□□ -0.82
HDAC6-210ENST00000441703 A0A0G2JS52 829 aa9.94□□□□□ -0.82
HDAC6-210ENST00000441703 KRT27Q7Z3Y8 459 aa9.94□□□□□ -0.82
HDAC6-210ENST00000441703 UNC5CLQ8IV45 518 aa9.94□□□□□ -0.82
HDAC6-210ENST00000441703 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.93□□□□□ -0.82
HDAC6-210ENST00000441703 MARF1Q9Y4F3 1742 aaKnown RBP9.93□□□□□ -0.82
HDAC6-210ENST00000441703 GLI3P10071 1580 aa9.93□□□□□ -0.82
HDAC6-210ENST00000441703 MYOM2P54296 1465 aa9.93□□□□□ -0.82
HDAC6-210ENST00000441703 PPP1R1BQ9UD71 204 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-210ENST00000441703 CCDC9Q9Y3X0 531 aaKnown RBP9.93□□□□□ -0.82
HDAC6-210ENST00000441703 ABCC5O15440 1437 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms