RNA–Protein interactions for RNA: ENST00000441549.7

PDPK1-204, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-204ENST00000441549 SCAF11Q99590 1463 aaKnown RBP33.23■■■□□ 2.91
PDPK1-204ENST00000441549 PREX1Q8TCU6 1659 aa33.22■■■□□ 2.91
PDPK1-204ENST00000441549 CHGAP10645 457 aaKnown RBP33.22■■■□□ 2.91
PDPK1-204ENST00000441549 TESK2Q96S53 571 aa33.22■■■□□ 2.91
PDPK1-204ENST00000441549 PPLO60437 1756 aa33.21■■■□□ 2.91
PDPK1-204ENST00000441549 ADGRF5Q8IZF2 1346 aa33.21■■■□□ 2.91
PDPK1-204ENST00000441549 POLR3GLQ9BT43 218 aa33.19■■■□□ 2.9
PDPK1-204ENST00000441549 PRKRIP1Q9H875 184 aaPredicted RBP33.18■■■□□ 2.9
PDPK1-204ENST00000441549 EIF3AQ14152 1382 aaKnown RBP33.14■■■□□ 2.9
PDPK1-204ENST00000441549 TMF1P82094 1093 aa33.13■■■□□ 2.89
PDPK1-204ENST00000441549 IDI1Q13907 227 aa33.13■■■□□ 2.89
PDPK1-204ENST00000441549 ERVK-7P63135 1459 aa33.12■■■□□ 2.89
PDPK1-204ENST00000441549 CFAP70Q5T0N1 1121 aa33.12■■■□□ 2.89
PDPK1-204ENST00000441549 PIK3C2GO75747 1445 aa33.12■■■□□ 2.89
PDPK1-204ENST00000441549 CLTCQ00610 1675 aaKnown RBP33.12■■■□□ 2.89
PDPK1-204ENST00000441549 SETBP1Q9Y6X0 1596 aa33.11■■■□□ 2.89
PDPK1-204ENST00000441549 NEXMIFQ5QGS0 1516 aa33.09■■■□□ 2.89
PDPK1-204ENST00000441549 DISP3Q9P2K9 1392 aa33.08■■■□□ 2.89
PDPK1-204ENST00000441549 VGFO15240 615 aaPredicted RBP33.05■■■□□ 2.88
PDPK1-204ENST00000441549 C14orf93Q9H972 538 aaKnown RBP33.05■■■□□ 2.88
PDPK1-204ENST00000441549 TMEM131LA2VDJ0 1609 aa33.05■■■□□ 2.88
PDPK1-204ENST00000441549 SLC24A1O60721 1099 aa33.05■■■□□ 2.88
PDPK1-204ENST00000441549 ZFYVE9O95405 1425 aa33.05■■■□□ 2.88
PDPK1-204ENST00000441549 SPATA31D1Q6ZQQ2 1576 aa33.03■■■□□ 2.88
PDPK1-204ENST00000441549 FBXO31Q5XUX0 539 aaPredicted RBP33.03■■■□□ 2.88
PDPK1-204ENST00000441549 MLECQ14165 292 aa33.01■■■□□ 2.87
PDPK1-204ENST00000441549 CDCA8Q53HL2 280 aa33■■■□□ 2.87
PDPK1-204ENST00000441549 SCAF1Q9H7N4 1312 aaKnown RBP32.99■■■□□ 2.87
PDPK1-204ENST00000441549 KTN1Q86UP2 1357 aaKnown RBP32.97■■■□□ 2.87
PDPK1-204ENST00000441549 MYO3AQ8NEV4 1616 aa32.97■■■□□ 2.87
PDPK1-204ENST00000441549 ESF1Q9H501 851 aaKnown RBP32.97■■■□□ 2.87
PDPK1-204ENST00000441549 ADGRB1O14514 1584 aa32.96■■■□□ 2.87
PDPK1-204ENST00000441549 MYO5BQ9ULV0 1848 aa32.94■■■□□ 2.86
PDPK1-204ENST00000441549 ZMYM3Q14202 1370 aa32.92■■■□□ 2.86
PDPK1-204ENST00000441549 SBNO2Q9Y2G9 1366 aa32.92■■■□□ 2.86
PDPK1-204ENST00000441549 TRHP20396 242 aaPredicted RBP32.9■■■□□ 2.86
PDPK1-204ENST00000441549 PER1O15534 1290 aaPredicted RBP32.88■■■□□ 2.85
PDPK1-204ENST00000441549 MRS2Q9HD23 443 aa32.88■■■□□ 2.85
PDPK1-204ENST00000441549 RALBP1Q15311 655 aa32.87■■■□□ 2.85
PDPK1-204ENST00000441549 CCDC184Q52MB2 194 aa32.86■■■□□ 2.85
PDPK1-204ENST00000441549 STAG3Q9UJ98 1225 aa32.85■■■□□ 2.85
PDPK1-204ENST00000441549 GTF3C3Q9Y5Q9 886 aa32.85■■■□□ 2.85
PDPK1-204ENST00000441549 NUTM2DQ5VT03 806 aaPredicted RBP32.83■■■□□ 2.85
PDPK1-204ENST00000441549 CENPJQ9HC77 1338 aaPredicted RBP32.83■■■□□ 2.85
PDPK1-204ENST00000441549 KDM5AP29375 1690 aaKnown RBP32.83■■■□□ 2.85
PDPK1-204ENST00000441549 A2ML1A8K2U0 1454 aa32.83■■■□□ 2.85
PDPK1-204ENST00000441549 PANK3Q9H999 370 aa32.82■■■□□ 2.85
PDPK1-204ENST00000441549 TMEM132EQ6IEE7 984 aa32.8■■■□□ 2.84
PDPK1-204ENST00000441549 TRAK1Q9UPV9 953 aa32.79■■■□□ 2.84
PDPK1-204ENST00000441549 PARD3Q8TEW0 1356 aa32.77■■■□□ 2.84
PDPK1-204ENST00000441549 MYBBP1AQ9BQG0 1328 aaKnown RBP32.77■■■□□ 2.84
PDPK1-204ENST00000441549 MYOM1P52179 1685 aa32.74■■■□□ 2.83
PDPK1-204ENST00000441549 QRICH2Q9H0J4 1663 aa32.74■■■□□ 2.83
PDPK1-204ENST00000441549 TNRQ92752 1358 aa32.74■■■□□ 2.83
PDPK1-204ENST00000441549 RIMS2Q9UQ26 1411 aa32.72■■■□□ 2.83
PDPK1-204ENST00000441549 CNGB1Q14028 1251 aaPredicted RBP32.72■■■□□ 2.83
PDPK1-204ENST00000441549 ARHGEF28Q8N1W1 1705 aaKnown RBP32.72■■■□□ 2.83
PDPK1-204ENST00000441549 ASXL1Q8IXJ9 1541 aa32.71■■■□□ 2.83
PDPK1-204ENST00000441549 BRD4O60885 1362 aaPredicted RBP32.71■■■□□ 2.83
PDPK1-204ENST00000441549 ALKQ9UM73 1620 aa32.69■■■□□ 2.82
PDPK1-204ENST00000441549 HNRNPUQ00839 825 aaKnown RBP eCLIP32.68■■■□□ 2.82
PDPK1-204ENST00000441549 FAM9BQ8IZU0 186 aa32.68■■■□□ 2.82
PDPK1-204ENST00000441549 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.67■■■□□ 2.82
PDPK1-204ENST00000441549 PUS7Q96PZ0 661 aaKnown RBP32.65■■■□□ 2.82
PDPK1-204ENST00000441549 KNSTRNQ9Y448 316 aa32.65■■■□□ 2.82
PDPK1-204ENST00000441549 TMC1Q8TDI8 760 aa32.65■■■□□ 2.82
PDPK1-204ENST00000441549 NLRP13Q86W25 1043 aa32.63■■■□□ 2.81
PDPK1-204ENST00000441549 HDGFP51858 240 aaKnown RBP32.63■■■□□ 2.81
PDPK1-204ENST00000441549 NPC1L1Q9UHC9 1359 aa32.62■■■□□ 2.81
PDPK1-204ENST00000441549 YTHDC2Q9H6S0 1430 aaKnown RBP32.62■■■□□ 2.81
PDPK1-204ENST00000441549 NLRP1Q9C000 1473 aa32.6■■■□□ 2.81
PDPK1-204ENST00000441549 PNISRQ8TF01 805 aaKnown RBP32.6■■■□□ 2.81
PDPK1-204ENST00000441549 CC2D1BQ5T0F9 858 aaKnown RBP32.59■■■□□ 2.81
PDPK1-204ENST00000441549 UBR1Q8IWV7 1749 aa32.58■■■□□ 2.81
PDPK1-204ENST00000441549 EVC2Q86UK5 1308 aa32.57■■■□□ 2.81
PDPK1-204ENST00000441549 AMER1Q5JTC6 1135 aaPredicted RBP32.57■■■□□ 2.81
PDPK1-204ENST00000441549 FER1L4A9Z1Z3 1794 aa32.57■■■□□ 2.8
PDPK1-204ENST00000441549 PTPRMP28827 1452 aa32.57■■■□□ 2.8
PDPK1-204ENST00000441549 C3P01024 1663 aa32.55■■■□□ 2.8
PDPK1-204ENST00000441549 SETD1AO15047 1707 aaKnown RBP32.54■■■□□ 2.8
PDPK1-204ENST00000441549 STK26Q9P289 416 aa32.54■■■□□ 2.8
PDPK1-204ENST00000441549 TULP4Q9NRJ4 1543 aa32.53■■■□□ 2.8
PDPK1-204ENST00000441549 TMEM2Q9UHN6 1383 aa32.53■■■□□ 2.8
PDPK1-204ENST00000441549 DLC1Q96QB1 1528 aa32.52■■■□□ 2.8
PDPK1-204ENST00000441549 LRPPRCP42704 1394 aaKnown RBP32.52■■■□□ 2.8
PDPK1-204ENST00000441549 ZBED9Q6R2W3 1325 aa32.51■■■□□ 2.79
PDPK1-204ENST00000441549 NRXN3Q9Y4C0 1643 aa32.51■■■□□ 2.79
PDPK1-204ENST00000441549 CEBPAP49715 358 aaPredicted RBP32.47■■■□□ 2.79
PDPK1-204ENST00000441549 SENP3Q9H4L4 574 aaPredicted RBP32.47■■■□□ 2.79
PDPK1-204ENST00000441549 PRAM1Q96QH2 718 aa32.46■■■□□ 2.79
PDPK1-204ENST00000441549 POGKQ9P215 609 aa32.46■■■□□ 2.79
PDPK1-204ENST00000441549 ABCC11Q96J66 1382 aa32.45■■■□□ 2.79
PDPK1-204ENST00000441549 CARD14Q9BXL6 1004 aa32.45■■■□□ 2.78
PDPK1-204ENST00000441549 NINLQ9Y2I6 1382 aa32.43■■■□□ 2.78
PDPK1-204ENST00000441549 INSRP06213 1382 aa32.4■■■□□ 2.78
PDPK1-204ENST00000441549 SLC12A5Q9H2X9 1139 aa32.4■■■□□ 2.78
PDPK1-204ENST00000441549 SAFB2Q14151 953 aaKnown RBP eCLIP32.4■■■□□ 2.78
PDPK1-204ENST00000441549 PPP2R1AP30153 589 aa32.39■■■□□ 2.78
PDPK1-204ENST00000441549 ATAD2Q6PL18 1390 aa32.37■■■□□ 2.77
PDPK1-204ENST00000441549 USP32Q8NFA0 1604 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms