RNA–Protein interactions for RNA: ENST00000440787.5

ARPC4-204, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 3

Gene ARPC4, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-204ENST00000440787 STRCP1A6NGW2 1772 aa29.39■■■□□ 2.3
ARPC4-204ENST00000440787 HDGFP51858 240 aaKnown RBP29.36■■■□□ 2.29
ARPC4-204ENST00000440787 ACIN1Q9UKV3 1341 aaKnown RBP29.35■■■□□ 2.29
ARPC4-204ENST00000440787 KIF1BO60333 1816 aa29.34■■■□□ 2.29
ARPC4-204ENST00000440787 PPP1R15AO75807 674 aaPredicted RBP29.34■■■□□ 2.29
ARPC4-204ENST00000440787 PLEKHG1Q9ULL1 1385 aa29.34■■■□□ 2.29
ARPC4-204ENST00000440787 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.33■■■□□ 2.29
ARPC4-204ENST00000440787 RAB3GAP2Q9H2M9 1393 aa29.32■■■□□ 2.28
ARPC4-204ENST00000440787 SLC26A8Q96RN1 970 aa29.29■■■□□ 2.28
ARPC4-204ENST00000440787 MPHOSPH9Q99550 1183 aa29.29■■■□□ 2.28
ARPC4-204ENST00000440787 BCANQ96GW7 911 aa29.28■■■□□ 2.28
ARPC4-204ENST00000440787 LRRC7Q96NW7 1537 aa29.27■■■□□ 2.28
ARPC4-204ENST00000440787 FOXD1Q16676 465 aa29.26■■■□□ 2.27
ARPC4-204ENST00000440787 NUTM2DQ5VT03 806 aaPredicted RBP29.25■■■□□ 2.27
ARPC4-204ENST00000440787 ZNF326Q5BKZ1 582 aaKnown RBP29.24■■■□□ 2.27
ARPC4-204ENST00000440787 SENP3Q9H4L4 574 aaPredicted RBP29.24■■■□□ 2.27
ARPC4-204ENST00000440787 DIP2AQ14689 1571 aa29.23■■■□□ 2.27
ARPC4-204ENST00000440787 NWD1Q149M9 1564 aa29.23■■■□□ 2.27
ARPC4-204ENST00000440787 NEXMIFQ5QGS0 1516 aa29.23■■■□□ 2.27
ARPC4-204ENST00000440787 UBAP1LF5GYI3 381 aa29.2■■■□□ 2.26
ARPC4-204ENST00000440787 ADAMTS13Q76LX8 1427 aa29.2■■■□□ 2.26
ARPC4-204ENST00000440787 KCNA6P17658 529 aa29.19■■■□□ 2.26
ARPC4-204ENST00000440787 CCDC144AA2RUR9 1427 aa29.19■■■□□ 2.26
ARPC4-204ENST00000440787 XIRP1Q702N8 1843 aaKnown RBP29.18■■■□□ 2.26
ARPC4-204ENST00000440787 CHD2O14647 1828 aaKnown RBP29.17■■■□□ 2.26
ARPC4-204ENST00000440787 NKTRP30414 1462 aaKnown RBP29.17■■■□□ 2.26
ARPC4-204ENST00000440787 NRXN3Q9Y4C0 1643 aa29.17■■■□□ 2.26
ARPC4-204ENST00000440787 SETBP1Q9Y6X0 1596 aa29.17■■■□□ 2.26
ARPC4-204ENST00000440787 TBX22Q9Y458 520 aa29.16■■■□□ 2.26
ARPC4-204ENST00000440787 PPLO60437 1756 aa29.12■■■□□ 2.25
ARPC4-204ENST00000440787 HRCP23327 699 aa29.12■■■□□ 2.25
ARPC4-204ENST00000440787 PIK3R4Q99570 1358 aa29.11■■■□□ 2.25
ARPC4-204ENST00000440787 TOM1O60784 492 aa29.1■■■□□ 2.25
ARPC4-204ENST00000440787 ALKQ9UM73 1620 aa29.09■■■□□ 2.25
ARPC4-204ENST00000440787 RPGRIP1LQ68CZ1 1315 aa29.09■■■□□ 2.25
ARPC4-204ENST00000440787 TMEM94Q12767 1356 aa29.08■■■□□ 2.25
ARPC4-204ENST00000440787 SPATA31E1Q6ZUB1 1445 aa29.07■■■□□ 2.24
ARPC4-204ENST00000440787 PROSER2Q86WR7 435 aaPredicted RBP29.06■■■□□ 2.24
ARPC4-204ENST00000440787 IFT172Q9UG01 1749 aa29.03■■■□□ 2.24
ARPC4-204ENST00000440787 VGFO15240 615 aaPredicted RBP29.03■■■□□ 2.24
ARPC4-204ENST00000440787 XRN1Q8IZH2 1706 aaKnown RBP29.02■■■□□ 2.24
ARPC4-204ENST00000440787 SCAF1Q9H7N4 1312 aaKnown RBP29.01■■■□□ 2.23
ARPC4-204ENST00000440787 PIP4K2BP78356 416 aa29.01■■■□□ 2.23
ARPC4-204ENST00000440787 PTPRUQ92729 1446 aa29.01■■■□□ 2.23
ARPC4-204ENST00000440787 SETD1AO15047 1707 aaKnown RBP29■■■□□ 2.23
ARPC4-204ENST00000440787 RBM33Q96EV2 1170 aaKnown RBP28.99■■■□□ 2.23
ARPC4-204ENST00000440787 RGL3Q3MIN7 710 aa28.98■■■□□ 2.23
ARPC4-204ENST00000440787 METP08581 1390 aa28.98■■■□□ 2.23
ARPC4-204ENST00000440787 ANKRD30BQ9BXX2 1392 aa28.97■■■□□ 2.23
ARPC4-204ENST00000440787 AMOTL2Q9Y2J4 779 aa28.96■■■□□ 2.23
ARPC4-204ENST00000440787 NCOA3Q9Y6Q9 1424 aa28.94■■■□□ 2.22
ARPC4-204ENST00000440787 MSH6P52701 1360 aa28.93■■■□□ 2.22
ARPC4-204ENST00000440787 ADGRF5Q8IZF2 1346 aa28.89■■■□□ 2.21
ARPC4-204ENST00000440787 C14orf37Q86TY3 774 aa28.86■■■□□ 2.21
ARPC4-204ENST00000440787 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.86■■■□□ 2.21
ARPC4-204ENST00000440787 PIK3C2GO75747 1445 aa28.86■■■□□ 2.21
ARPC4-204ENST00000440787 MYOM2P54296 1465 aa28.85■■■□□ 2.21
ARPC4-204ENST00000440787 HSPA1LP34931 641 aa28.85■■■□□ 2.21
ARPC4-204ENST00000440787 PTCH1Q13635 1447 aa28.82■■■□□ 2.2
ARPC4-204ENST00000440787 PRAG1Q86YV5 1406 aa28.82■■■□□ 2.2
ARPC4-204ENST00000440787 NRXN1Q9ULB1 1477 aa28.82■■■□□ 2.2
ARPC4-204ENST00000440787 ROBO1Q9Y6N7 1651 aa28.81■■■□□ 2.2
ARPC4-204ENST00000440787 FAM135BQ49AJ0 1406 aa28.81■■■□□ 2.2
ARPC4-204ENST00000440787 C19orf44Q9H6X5 657 aa28.79■■■□□ 2.2
ARPC4-204ENST00000440787 LAMC1P11047 1609 aa28.78■■■□□ 2.2
ARPC4-204ENST00000440787 ASXL1Q8IXJ9 1541 aa28.78■■■□□ 2.2
ARPC4-204ENST00000440787 DCCP43146 1447 aa28.77■■■□□ 2.2
ARPC4-204ENST00000440787 NALCNQ8IZF0 1738 aa28.77■■■□□ 2.2
ARPC4-204ENST00000440787 ADGRL3Q9HAR2 1447 aa28.76■■■□□ 2.19
ARPC4-204ENST00000440787 CADPS2Q86UW7 1296 aa28.75■■■□□ 2.19
ARPC4-204ENST00000440787 SLAIN2Q9P270 581 aa28.75■■■□□ 2.19
ARPC4-204ENST00000440787 ROBO2Q9HCK4 1378 aa28.75■■■□□ 2.19
ARPC4-204ENST00000440787 ATF3P18847 181 aa28.74■■■□□ 2.19
ARPC4-204ENST00000440787 TRIM26Q12899 539 aaPredicted RBP28.74■■■□□ 2.19
ARPC4-204ENST00000440787 KNDC1Q76NI1 1749 aa28.73■■■□□ 2.19
ARPC4-204ENST00000440787 TECPR2O15040 1411 aa28.7■■■□□ 2.19
ARPC4-204ENST00000440787 LRPPRCP42704 1394 aaKnown RBP28.7■■■□□ 2.18
ARPC4-204ENST00000440787 C14orf93Q9H972 538 aaKnown RBP28.69■■■□□ 2.18
ARPC4-204ENST00000440787 DHX57Q6P158 1386 aaKnown RBP28.67■■■□□ 2.18
ARPC4-204ENST00000440787 TMEM132EQ6IEE7 984 aa28.67■■■□□ 2.18
ARPC4-204ENST00000440787 DCAF11Q8TEB1 546 aa28.67■■■□□ 2.18
ARPC4-204ENST00000440787 YTHDC2Q9H6S0 1430 aaKnown RBP28.66■■■□□ 2.18
ARPC4-204ENST00000440787 ABCC11Q96J66 1382 aa28.65■■■□□ 2.18
ARPC4-204ENST00000440787 CFAP70Q5T0N1 1121 aa28.65■■■□□ 2.18
ARPC4-204ENST00000440787 STAC3Q96MF2 364 aa28.65■■■□□ 2.18
ARPC4-204ENST00000440787 STK26Q9P289 416 aa28.65■■■□□ 2.18
ARPC4-204ENST00000440787 MST1RQ04912 1400 aa28.65■■■□□ 2.18
ARPC4-204ENST00000440787 KDM2AQ9Y2K7 1162 aa28.64■■■□□ 2.18
ARPC4-204ENST00000440787 PHLPP1O60346 1717 aa28.63■■■□□ 2.17
ARPC4-204ENST00000440787 ADGRB1O14514 1584 aa28.6■■■□□ 2.17
ARPC4-204ENST00000440787 CDC42BPGQ6DT37 1551 aa28.59■■■□□ 2.17
ARPC4-204ENST00000440787 DISP3Q9P2K9 1392 aa28.59■■■□□ 2.17
ARPC4-204ENST00000440787 MED1Q15648 1581 aaPredicted RBP28.58■■■□□ 2.17
ARPC4-204ENST00000440787 AHDC1Q5TGY3 1603 aaPredicted RBP28.58■■■□□ 2.17
ARPC4-204ENST00000440787 COL16A1Q07092 1604 aaPredicted RBP28.56■■■□□ 2.16
ARPC4-204ENST00000440787 BRINP3Q76B58 766 aa28.56■■■□□ 2.16
ARPC4-204ENST00000440787 PLEKHH1Q9ULM0 1364 aa28.55■■■□□ 2.16
ARPC4-204ENST00000440787 WAPLQ7Z5K2 1190 aa28.55■■■□□ 2.16
ARPC4-204ENST00000440787 DLC1Q96QB1 1528 aa28.54■■■□□ 2.16
ARPC4-204ENST00000440787 C1orf167Q5SNV9 1468 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms