RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 SLC4A10Q6U841 1118 aa25.79■■□□□ 1.72
FMR1-208ENST00000440235 RSPH4AQ5TD94 716 aa25.79■■□□□ 1.72
FMR1-208ENST00000440235 DRC7Q8IY82 874 aa25.77■■□□□ 1.72
FMR1-208ENST00000440235 MAGI1Q96QZ7 1491 aaPredicted RBP25.77■■□□□ 1.72
FMR1-208ENST00000440235 HSP90AA2PQ14568 343 aaPredicted RBP25.76■■□□□ 1.71
FMR1-208ENST00000440235 CAMSAP2Q08AD1 1489 aa25.76■■□□□ 1.71
FMR1-208ENST00000440235 ADAMTS8Q9UP79 889 aa25.76■■□□□ 1.71
FMR1-208ENST00000440235 WDR62O43379 1518 aa25.75■■□□□ 1.71
FMR1-208ENST00000440235 CALD1Q05682 793 aaKnown RBP25.75■■□□□ 1.71
FMR1-208ENST00000440235 PBRM1Q86U86 1689 aa25.75■■□□□ 1.71
FMR1-208ENST00000440235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.74■■□□□ 1.71
FMR1-208ENST00000440235 ANKRD45Q5TZF3 282 aa25.74■■□□□ 1.71
FMR1-208ENST00000440235 C9orf84Q5VXU9 1444 aa25.74■■□□□ 1.71
FMR1-208ENST00000440235 DDX49Q9Y6V7 483 aaKnown RBP25.72■■□□□ 1.71
FMR1-208ENST00000440235 KIAA1107Q9UPP5 1409 aa25.72■■□□□ 1.71
FMR1-208ENST00000440235 ARHGEF11O15085 1522 aa25.72■■□□□ 1.71
FMR1-208ENST00000440235 CCDC144AA2RUR9 1427 aa25.72■■□□□ 1.71
FMR1-208ENST00000440235 TCOF1Q13428 1488 aaKnown RBP25.7■■□□□ 1.7
FMR1-208ENST00000440235 TRIM6-TRIM34B2RNG4 842 aa25.7■■□□□ 1.7
FMR1-208ENST00000440235 NCOA1Q15788 1441 aa25.7■■□□□ 1.7
FMR1-208ENST00000440235 CHMP4BQ9H444 224 aaKnown RBP25.7■■□□□ 1.7
FMR1-208ENST00000440235 KIAA0556O60303 1618 aa25.68■■□□□ 1.7
FMR1-208ENST00000440235 RAPGEF6Q8TEU7 1601 aa25.68■■□□□ 1.7
FMR1-208ENST00000440235 DISP1Q96F81 1524 aa25.68■■□□□ 1.7
FMR1-208ENST00000440235 TULP1O00294 542 aaPredicted RBP25.67■■□□□ 1.7
FMR1-208ENST00000440235 SPAG9O60271 1321 aaKnown RBP25.67■■□□□ 1.7
FMR1-208ENST00000440235 LNPKQ9C0E8 428 aa25.66■■□□□ 1.7
FMR1-208ENST00000440235 GPATCH8Q9UKJ3 1502 aaKnown RBP25.65■■□□□ 1.7
FMR1-208ENST00000440235 NBPF1Q3BBV0 1214 aa25.65■■□□□ 1.7
FMR1-208ENST00000440235 EIF4G3O43432 1585 aaKnown RBP25.63■■□□□ 1.69
FMR1-208ENST00000440235 CHAF1AQ13111 956 aaPredicted RBP25.63■■□□□ 1.69
FMR1-208ENST00000440235 RPRD2Q5VT52 1461 aaKnown RBP25.62■■□□□ 1.69
FMR1-208ENST00000440235 MCCP23508 829 aa25.62■■□□□ 1.69
FMR1-208ENST00000440235 E9PSI1 815 aa25.61■■□□□ 1.69
FMR1-208ENST00000440235 KIAA2012Q0VF49 1180 aa25.61■■□□□ 1.69
FMR1-208ENST00000440235 RTF1Q92541 710 aaKnown RBP25.61■■□□□ 1.69
FMR1-208ENST00000440235 BCAR3O75815 825 aa25.6■■□□□ 1.69
FMR1-208ENST00000440235 PNISRQ8TF01 805 aaKnown RBP25.6■■□□□ 1.69
FMR1-208ENST00000440235 RSPH6AQ9H0K4 717 aa25.6■■□□□ 1.69
FMR1-208ENST00000440235 HDGFL2Q7Z4V5 671 aaPredicted RBP25.6■■□□□ 1.69
FMR1-208ENST00000440235 BACH2Q9BYV9 841 aa25.59■■□□□ 1.69
FMR1-208ENST00000440235 ARHGAP5Q13017 1502 aa25.59■■□□□ 1.69
FMR1-208ENST00000440235 KANK1Q14678 1352 aa25.59■■□□□ 1.69
FMR1-208ENST00000440235 CGNL1Q0VF96 1302 aa25.58■■□□□ 1.69
FMR1-208ENST00000440235 ZKSCAN2Q63HK3 967 aa25.58■■□□□ 1.69
FMR1-208ENST00000440235 BCL11BQ9C0K0 894 aaPredicted RBP25.57■■□□□ 1.68
FMR1-208ENST00000440235 KIAA1211Q6ZU35 1233 aa25.57■■□□□ 1.68
FMR1-208ENST00000440235 FAM13BQ9NYF5 915 aa25.57■■□□□ 1.68
FMR1-208ENST00000440235 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.54■■□□□ 1.68
FMR1-208ENST00000440235 CDK11BP21127 795 aaKnown RBP25.54■■□□□ 1.68
FMR1-208ENST00000440235 AFAP1Q8N556 730 aa25.54■■□□□ 1.68
FMR1-208ENST00000440235 LTV1Q96GA3 475 aaPredicted RBP25.54■■□□□ 1.68
FMR1-208ENST00000440235 ATP10BO94823 1461 aa25.53■■□□□ 1.68
FMR1-208ENST00000440235 RILPL2Q969X0 211 aa25.53■■□□□ 1.68
FMR1-208ENST00000440235 CHMP3Q9Y3E7 222 aa25.53■■□□□ 1.68
FMR1-208ENST00000440235 NECTIN2Q92692 538 aa25.51■■□□□ 1.67
FMR1-208ENST00000440235 KDM6BO15054 1643 aa25.5■■□□□ 1.67
FMR1-208ENST00000440235 KIF14Q15058 1648 aa25.5■■□□□ 1.67
FMR1-208ENST00000440235 C20orf194Q5TEA3 1177 aa25.49■■□□□ 1.67
FMR1-208ENST00000440235 DZIP1LQ8IYY4 767 aaKnown RBP25.49■■□□□ 1.67
FMR1-208ENST00000440235 MPNDQ8N594 471 aa25.49■■□□□ 1.67
FMR1-208ENST00000440235 C22orf23Q9BZE7 217 aa25.49■■□□□ 1.67
FMR1-208ENST00000440235 DDX11L8A8MPP1 907 aa25.49■■□□□ 1.67
FMR1-208ENST00000440235 CCDC9Q9Y3X0 531 aaKnown RBP25.49■■□□□ 1.67
FMR1-208ENST00000440235 CHMP5Q9NZZ3 219 aa25.48■■□□□ 1.67
FMR1-208ENST00000440235 ZNF330Q9Y3S2 320 aaPredicted RBP25.47■■□□□ 1.67
FMR1-208ENST00000440235 HAP1P54257 671 aaPredicted RBP25.47■■□□□ 1.67
FMR1-208ENST00000440235 MINK1Q8N4C8 1332 aaPredicted RBP25.46■■□□□ 1.67
FMR1-208ENST00000440235 RNF214Q8ND24 703 aa25.45■■□□□ 1.67
FMR1-208ENST00000440235 TMEM132EQ6IEE7 984 aa25.44■■□□□ 1.66
FMR1-208ENST00000440235 RIPK4P57078 832 aa25.43■■□□□ 1.66
FMR1-208ENST00000440235 ST18O60284 1047 aa25.42■■□□□ 1.66
FMR1-208ENST00000440235 GGNBP2Q9H3C7 697 aa25.42■■□□□ 1.66
FMR1-208ENST00000440235 CCDC141Q6ZP82 1450 aa25.42■■□□□ 1.66
FMR1-208ENST00000440235 HMOX1P09601 288 aa25.42■■□□□ 1.66
FMR1-208ENST00000440235 STK31Q9BXU1 1019 aa25.42■■□□□ 1.66
FMR1-208ENST00000440235 DNMT1P26358 1616 aaKnown RBP25.42■■□□□ 1.66
FMR1-208ENST00000440235 TERF2IPQ9NYB0 399 aa25.41■■□□□ 1.66
FMR1-208ENST00000440235 CEP170Q5SW79 1584 aa25.41■■□□□ 1.66
FMR1-208ENST00000440235 TCP11L2Q8N4U5 519 aa25.4■■□□□ 1.66
FMR1-208ENST00000440235 PDZRN3Q9UPQ7 1066 aa25.4■■□□□ 1.66
FMR1-208ENST00000440235 TRAK2O60296 914 aa25.4■■□□□ 1.66
FMR1-208ENST00000440235 WASHC2CQ9Y4E1 1318 aa25.39■■□□□ 1.66
FMR1-208ENST00000440235 MCTP1Q6DN14 999 aa25.39■■□□□ 1.66
FMR1-208ENST00000440235 C1orf115Q9H7X2 142 aa25.39■■□□□ 1.66
FMR1-208ENST00000440235 TSR2Q969E8 191 aaKnown RBP25.38■■□□□ 1.65
FMR1-208ENST00000440235 NUP160Q12769 1436 aa25.38■■□□□ 1.65
FMR1-208ENST00000440235 MTHFSP49914 203 aa25.37■■□□□ 1.65
FMR1-208ENST00000440235 PZPP20742 1482 aa25.37■■□□□ 1.65
FMR1-208ENST00000440235 FAM43AQ8N2R8 423 aa25.37■■□□□ 1.65
FMR1-208ENST00000440235 SYAP1Q96A49 352 aaPredicted RBP25.37■■□□□ 1.65
FMR1-208ENST00000440235 LRRIQ1Q96JM4 1722 aa25.37■■□□□ 1.65
FMR1-208ENST00000440235 PPP2R1AP30153 589 aa25.37■■□□□ 1.65
FMR1-208ENST00000440235 ITSN2Q9NZM3 1697 aa25.36■■□□□ 1.65
FMR1-208ENST00000440235 GCC2Q8IWJ2 1684 aa25.36■■□□□ 1.65
FMR1-208ENST00000440235 CFAP70Q5T0N1 1121 aa25.35■■□□□ 1.65
FMR1-208ENST00000440235 NRDCO43847 1150 aa25.35■■□□□ 1.65
FMR1-208ENST00000440235 EIF3AQ14152 1382 aaKnown RBP25.34■■□□□ 1.65
FMR1-208ENST00000440235 HMMRO75330 724 aa25.34■■□□□ 1.65
FMR1-208ENST00000440235 DDX19BQ9UMR2 479 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms