RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 AEBP2Q6ZN18 517 aaPredicted RBP9.33□□□□□ -0.92
TSC1-203ENST00000440111 UHRF1BP1Q6BDS2 1440 aa9.33□□□□□ -0.92
TSC1-203ENST00000440111 KIAA0556O60303 1618 aa9.33□□□□□ -0.92
TSC1-203ENST00000440111 NOP58Q9Y2X3 529 aaKnown RBP9.33□□□□□ -0.92
TSC1-203ENST00000440111 LAS1LQ9Y4W2 734 aaKnown RBP9.33□□□□□ -0.92
TSC1-203ENST00000440111 RALGAPBQ86X10 1494 aa9.33□□□□□ -0.92
TSC1-203ENST00000440111 DCAF11Q8TEB1 546 aa9.32□□□□□ -0.92
TSC1-203ENST00000440111 RASSF8Q8NHQ8 419 aa9.32□□□□□ -0.92
TSC1-203ENST00000440111 SENP3Q9H4L4 574 aaPredicted RBP9.32□□□□□ -0.92
TSC1-203ENST00000440111 MYO6Q9UM54 1294 aa9.32□□□□□ -0.92
TSC1-203ENST00000440111 RBM19Q9Y4C8 960 aaKnown RBP9.32□□□□□ -0.92
TSC1-203ENST00000440111 ARID3CA6NKF2 412 aa9.32□□□□□ -0.92
TSC1-203ENST00000440111 CALD1Q05682 793 aaKnown RBP9.32□□□□□ -0.92
TSC1-203ENST00000440111 PATL2C9JE40 543 aaKnown RBP9.31□□□□□ -0.92
TSC1-203ENST00000440111 RSPH6AQ9H0K4 717 aa9.31□□□□□ -0.92
TSC1-203ENST00000440111 DCTN1Q14203 1278 aa9.31□□□□□ -0.92
TSC1-203ENST00000440111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.31□□□□□ -0.921e-6■■■■■ 178.2
TSC1-203ENST00000440111 RAPGEF6Q8TEU7 1601 aa9.31□□□□□ -0.92
TSC1-203ENST00000440111 CAGE1Q8TC20 777 aa9.31□□□□□ -0.92
TSC1-203ENST00000440111 ERBINQ96RT1 1412 aa9.3□□□□□ -0.92
TSC1-203ENST00000440111 NEFHP12036 1026 aa9.3□□□□□ -0.92
TSC1-203ENST00000440111 SPAG9O60271 1321 aaKnown RBP9.3□□□□□ -0.92
TSC1-203ENST00000440111 DNMT1P26358 1616 aaKnown RBP9.3□□□□□ -0.92
TSC1-203ENST00000440111 RPGRIP1LQ68CZ1 1315 aa9.3□□□□□ -0.92
TSC1-203ENST00000440111 TAF7LQ5H9L4 462 aa9.3□□□□□ -0.92
TSC1-203ENST00000440111 IPO7O95373 1038 aaKnown RBP9.3□□□□□ -0.92
TSC1-203ENST00000440111 WWC2Q6AWC2 1192 aa9.29□□□□□ -0.92
TSC1-203ENST00000440111 CCDC191Q8NCU4 936 aa9.29□□□□□ -0.92
TSC1-203ENST00000440111 KAT6BQ8WYB5 2073 aa9.29□□□□□ -0.92
TSC1-203ENST00000440111 RCAN3Q9UKA8 241 aa9.29□□□□□ -0.92
TSC1-203ENST00000440111 CTDP1Q9Y5B0 961 aaPredicted RBP9.29□□□□□ -0.92
TSC1-203ENST00000440111 GCC2Q8IWJ2 1684 aa9.29□□□□□ -0.92
TSC1-203ENST00000440111 NUP153P49790 1475 aaKnown RBP9.29□□□□□ -0.92
TSC1-203ENST00000440111 MARCH6O60337 910 aa9.29□□□□□ -0.92
TSC1-203ENST00000440111 TPRNQ4KMQ1 711 aa9.29□□□□□ -0.92
TSC1-203ENST00000440111 FEZ1Q99689 392 aa9.29□□□□□ -0.92
TSC1-203ENST00000440111 CGNL1Q0VF96 1302 aa9.29□□□□□ -0.92
TSC1-203ENST00000440111 LRRFIP1Q32MZ4 808 aaKnown RBP9.29□□□□□ -0.92
TSC1-203ENST00000440111 GBP4Q96PP9 640 aa9.28□□□□□ -0.92
TSC1-203ENST00000440111 R3HCC1Q9Y3T6 440 aaKnown RBP9.28□□□□□ -0.92
TSC1-203ENST00000440111 ODF2Q5BJF6 829 aa9.28□□□□□ -0.92
TSC1-203ENST00000440111 NOM1Q5C9Z4 860 aaKnown RBP9.28□□□□□ -0.92
TSC1-203ENST00000440111 AMOTL1Q8IY63 956 aa9.28□□□□□ -0.92
TSC1-203ENST00000440111 EIF2AK4Q9P2K8 1649 aaKnown RBP9.28□□□□□ -0.92
TSC1-203ENST00000440111 PRG4Q92954 1404 aaPredicted RBP9.28□□□□□ -0.92
TSC1-203ENST00000440111 GOLGA6L3A6NEY3 463 aa9.28□□□□□ -0.92
TSC1-203ENST00000440111 ZNF526Q8TF50 670 aaPredicted RBP9.28□□□□□ -0.92
TSC1-203ENST00000440111 ANKRD20A12PQ8NF67 263 aa9.27□□□□□ -0.92
TSC1-203ENST00000440111 HMGB1P1B2RPK0 211 aaPredicted RBP9.27□□□□□ -0.93
TSC1-203ENST00000440111 PDE4CQ08493 712 aa9.27□□□□□ -0.93
TSC1-203ENST00000440111 GPATCH8Q9UKJ3 1502 aaKnown RBP9.27□□□□□ -0.93
TSC1-203ENST00000440111 HMGB1P09429 215 aaKnown RBP9.27□□□□□ -0.93
TSC1-203ENST00000440111 ANKRD18AQ8IVF6 992 aa9.27□□□□□ -0.93
TSC1-203ENST00000440111 CCDC47Q96A33 483 aaKnown RBP9.27□□□□□ -0.93
TSC1-203ENST00000440111 CT47B1P0C2W7 299 aaPredicted RBP9.26□□□□□ -0.93
TSC1-203ENST00000440111 ZNF771Q7L3S4 317 aaPredicted RBP9.26□□□□□ -0.93
TSC1-203ENST00000440111 CWC22Q9HCG8 908 aaKnown RBP9.26□□□□□ -0.93
TSC1-203ENST00000440111 KDM2AQ9Y2K7 1162 aa9.26□□□□□ -0.93
TSC1-203ENST00000440111 RTEL1-TNFRSF6BF6WH68 1400 aa9.26□□□□□ -0.93
TSC1-203ENST00000440111 ARHGEF5Q12774 1597 aa9.26□□□□□ -0.93
TSC1-203ENST00000440111 VPS53Q5VIR6 699 aa9.26□□□□□ -0.93
TSC1-203ENST00000440111 TRIM34Q9BYJ4 488 aa9.26□□□□□ -0.93
TSC1-203ENST00000440111 WWC1Q8IX03 1113 aa9.25□□□□□ -0.93
TSC1-203ENST00000440111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.25□□□□□ -0.931e-7■□□□□ 9.3
TSC1-203ENST00000440111 CENPQQ7L2Z9 268 aaPredicted RBP9.25□□□□□ -0.93
TSC1-203ENST00000440111 IPO9Q96P70 1041 aaKnown RBP9.25□□□□□ -0.93
TSC1-203ENST00000440111 PUS7Q96PZ0 661 aaKnown RBP9.25□□□□□ -0.93
TSC1-203ENST00000440111 HOOK1Q9UJC3 728 aaKnown RBP9.25□□□□□ -0.93
TSC1-203ENST00000440111 CCDC173Q0VFZ6 552 aa9.25□□□□□ -0.93
TSC1-203ENST00000440111 TEX35Q5T0J7 233 aa9.25□□□□□ -0.93
TSC1-203ENST00000440111 E9PSI1 815 aa9.25□□□□□ -0.93
TSC1-203ENST00000440111 TPD52L1Q16890 204 aaPredicted RBP9.25□□□□□ -0.93
TSC1-203ENST00000440111 CCDC112Q8NEF3 446 aa9.24□□□□□ -0.93
TSC1-203ENST00000440111 AK7Q96M32 723 aa9.24□□□□□ -0.93
TSC1-203ENST00000440111 KDM5DQ9BY66 1539 aa9.24□□□□□ -0.93
TSC1-203ENST00000440111 GPRASP1Q5JY77 1395 aa9.24□□□□□ -0.93
TSC1-203ENST00000440111 NPC1L1Q9UHC9 1359 aa9.24□□□□□ -0.93
TSC1-203ENST00000440111 ACBD3Q9H3P7 528 aa9.24□□□□□ -0.93
TSC1-203ENST00000440111 CDK13Q14004 1512 aaKnown RBP9.24□□□□□ -0.93
TSC1-203ENST00000440111 IL27Q8NEV9 243 aa9.24□□□□□ -0.93
TSC1-203ENST00000440111 HMGB3O15347 200 aaKnown RBP9.24□□□□□ -0.93
TSC1-203ENST00000440111 IPO8O15397 1037 aaKnown RBP9.24□□□□□ -0.93
TSC1-203ENST00000440111 TAOK2Q9UL54 1235 aa9.24□□□□□ -0.93
TSC1-203ENST00000440111 PMFBP1Q8TBY8 1022 aa9.23□□□□□ -0.93
TSC1-203ENST00000440111 CCDC43Q96MW1 224 aaKnown RBP9.23□□□□□ -0.93
TSC1-203ENST00000440111 ARHGAP5Q13017 1502 aa9.23□□□□□ -0.93
TSC1-203ENST00000440111 GORABQ5T7V8 394 aa9.23□□□□□ -0.93
TSC1-203ENST00000440111 DUOX2Q9NRD8 1548 aa9.23□□□□□ -0.93
TSC1-203ENST00000440111 RRP1P56182 461 aaKnown RBP9.23□□□□□ -0.93
TSC1-203ENST00000440111 NOL10Q9BSC4 688 aaKnown RBP9.23□□□□□ -0.93
TSC1-203ENST00000440111 WDR7Q9Y4E6 1490 aa9.23□□□□□ -0.93
TSC1-203ENST00000440111 NSD2O96028 1365 aa9.23□□□□□ -0.93
TSC1-203ENST00000440111 TARBP1Q13395 1621 aaKnown RBP9.22□□□□□ -0.93
TSC1-203ENST00000440111 RTF1Q92541 710 aaKnown RBP9.22□□□□□ -0.93
TSC1-203ENST00000440111 LMOD2Q6P5Q4 547 aa9.22□□□□□ -0.93
TSC1-203ENST00000440111 PTPRKQ15262 1439 aa9.22□□□□□ -0.93
TSC1-203ENST00000440111 RWDD1Q9H446 243 aaPredicted RBP9.21□□□□□ -0.93
TSC1-203ENST00000440111 DISP1Q96F81 1524 aa9.21□□□□□ -0.93
TSC1-203ENST00000440111 TRIM21P19474 475 aaKnown RBP9.21□□□□□ -0.93
TSC1-203ENST00000440111 CT47A1Q5JQC4 288 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms