RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 WASHC2CQ9Y4E1 1318 aa14.1□□□□□ -0.15
CPNE1-218ENST00000439806 ADGRB3O60242 1522 aa14.1□□□□□ -0.15
CPNE1-218ENST00000439806 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
CPNE1-218ENST00000439806 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
CPNE1-218ENST00000439806 ERICH6BQ5W0A0 696 aa14.09□□□□□ -0.15
CPNE1-218ENST00000439806 NLRP13Q86W25 1043 aa14.09□□□□□ -0.15
CPNE1-218ENST00000439806 ZC3H13Q5T200 1668 aaKnown RBP14.08□□□□□ -0.16
CPNE1-218ENST00000439806 PANK3Q9H999 370 aa14.08□□□□□ -0.16
CPNE1-218ENST00000439806 ABCC3O15438 1527 aa14.08□□□□□ -0.16
CPNE1-218ENST00000439806 LRPPRCP42704 1394 aaKnown RBP14.08□□□□□ -0.16
CPNE1-218ENST00000439806 IRX6P78412 446 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-218ENST00000439806 GLI2P10070 1586 aa14.07□□□□□ -0.16
CPNE1-218ENST00000439806 MYOM1P52179 1685 aa14.07□□□□□ -0.16
CPNE1-218ENST00000439806 MYO3AQ8NEV4 1616 aa14.06□□□□□ -0.16
CPNE1-218ENST00000439806 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
CPNE1-218ENST00000439806 GGT6Q6P531 493 aa14.06□□□□□ -0.16
CPNE1-218ENST00000439806 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
CPNE1-218ENST00000439806 CC2D1BQ5T0F9 858 aaKnown RBP14.05□□□□□ -0.16
CPNE1-218ENST00000439806 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
CPNE1-218ENST00000439806 NUDCQ9Y266 331 aa14.05□□□□□ -0.16
CPNE1-218ENST00000439806 NPATQ14207 1427 aa14.05□□□□□ -0.16
CPNE1-218ENST00000439806 SETBP1Q9Y6X0 1596 aa14.05□□□□□ -0.16
CPNE1-218ENST00000439806 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
CPNE1-218ENST00000439806 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
CPNE1-218ENST00000439806 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
CPNE1-218ENST00000439806 NOS1P29475 1434 aa14.04□□□□□ -0.16
CPNE1-218ENST00000439806 NRXN1Q9ULB1 1477 aa14.04□□□□□ -0.16
CPNE1-218ENST00000439806 SIGLEC1Q9BZZ2 1709 aa14.04□□□□□ -0.16
CPNE1-218ENST00000439806 SLC24A1O60721 1099 aa14.03□□□□□ -0.16
CPNE1-218ENST00000439806 ADGRF5Q8IZF2 1346 aa14.03□□□□□ -0.16
CPNE1-218ENST00000439806 CFAP70Q5T0N1 1121 aa14.02□□□□□ -0.17
CPNE1-218ENST00000439806 PPP4R2Q9NY27 417 aa14.02□□□□□ -0.17
CPNE1-218ENST00000439806 RAPGEF3O95398 923 aa14.01□□□□□ -0.17
CPNE1-218ENST00000439806 KNSTRNQ9Y448 316 aa14.01□□□□□ -0.17
CPNE1-218ENST00000439806 QRICH2Q9H0J4 1663 aa14.01□□□□□ -0.17
CPNE1-218ENST00000439806 PIK3C2BO00750 1634 aa14.01□□□□□ -0.17
CPNE1-218ENST00000439806 ZMYM4Q5VZL5 1548 aa14□□□□□ -0.17
CPNE1-218ENST00000439806 ASXL1Q8IXJ9 1541 aa14□□□□□ -0.17
CPNE1-218ENST00000439806 TSPOAP1O95153 1857 aa14□□□□□ -0.17
CPNE1-218ENST00000439806 INSRP06213 1382 aa13.99□□□□□ -0.17
CPNE1-218ENST00000439806 RPGRIP1LQ68CZ1 1315 aa13.99□□□□□ -0.17
CPNE1-218ENST00000439806 ERVK-7P63135 1459 aa13.99□□□□□ -0.17
CPNE1-218ENST00000439806 DIP2BQ9P265 1576 aa13.98□□□□□ -0.17
CPNE1-218ENST00000439806 CYB5RLQ6IPT4 315 aa13.98□□□□□ -0.17
CPNE1-218ENST00000439806 PREX1Q8TCU6 1659 aa13.97□□□□□ -0.17
CPNE1-218ENST00000439806 PIK3C2GO75747 1445 aa13.97□□□□□ -0.17
CPNE1-218ENST00000439806 ARHGAP31Q2M1Z3 1444 aa13.97□□□□□ -0.17
CPNE1-218ENST00000439806 MYO5BQ9ULV0 1848 aa13.96□□□□□ -0.17
CPNE1-218ENST00000439806 BLMP54132 1417 aaPredicted RBP13.96□□□□□ -0.18
CPNE1-218ENST00000439806 YEATS2Q9ULM3 1422 aa13.96□□□□□ -0.18
CPNE1-218ENST00000439806 SBNO2Q9Y2G9 1366 aa13.96□□□□□ -0.18
CPNE1-218ENST00000439806 SENP3-EIF4A1A0A087X0R7 540 aa13.95□□□□□ -0.18
CPNE1-218ENST00000439806 PDE3BQ13370 1112 aa13.95□□□□□ -0.18
CPNE1-218ENST00000439806 NPC1L1Q9UHC9 1359 aa13.95□□□□□ -0.18
CPNE1-218ENST00000439806 NEXMIFQ5QGS0 1516 aa13.95□□□□□ -0.18
CPNE1-218ENST00000439806 CENPJQ9HC77 1338 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-218ENST00000439806 C14orf93Q9H972 538 aaKnown RBP13.93□□□□□ -0.18
CPNE1-218ENST00000439806 ARHGEF28Q8N1W1 1705 aaKnown RBP13.93□□□□□ -0.18
CPNE1-218ENST00000439806 ADGRB1O14514 1584 aa13.92□□□□□ -0.18
CPNE1-218ENST00000439806 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
CPNE1-218ENST00000439806 FAM69CQ0P6D2 419 aa13.92□□□□□ -0.18
CPNE1-218ENST00000439806 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-218ENST00000439806 RNF123Q5XPI4 1314 aa13.91□□□□□ -0.18
CPNE1-218ENST00000439806 WDR43Q15061 677 aaKnown RBP eCLIP13.91□□□□□ -0.18
CPNE1-218ENST00000439806 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-218ENST00000439806 TRAK1Q9UPV9 953 aa13.9□□□□□ -0.18
CPNE1-218ENST00000439806 SALL2Q9Y467 1007 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-218ENST00000439806 REREQ9P2R6 1566 aa13.9□□□□□ -0.18
CPNE1-218ENST00000439806 TMEM131LA2VDJ0 1609 aa13.89□□□□□ -0.19
CPNE1-218ENST00000439806 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
CPNE1-218ENST00000439806 SLC52A1Q9NWF4 448 aa13.88□□□□□ -0.19
CPNE1-218ENST00000439806 AGLP35573 1532 aa13.87□□□□□ -0.19
CPNE1-218ENST00000439806 CLTCQ00610 1675 aaKnown RBP13.87□□□□□ -0.19
CPNE1-218ENST00000439806 USP32Q8NFA0 1604 aa13.86□□□□□ -0.19
CPNE1-218ENST00000439806 RCAN3Q9UKA8 241 aa13.86□□□□□ -0.19
CPNE1-218ENST00000439806 ZFYVE9O95405 1425 aa13.86□□□□□ -0.19
CPNE1-218ENST00000439806 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
CPNE1-218ENST00000439806 RRP1P56182 461 aaKnown RBP13.84□□□□□ -0.19
CPNE1-218ENST00000439806 IDI1Q13907 227 aa13.84□□□□□ -0.19
CPNE1-218ENST00000439806 NUTM2DQ5VT03 806 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-218ENST00000439806 ADAMTS8Q9UP79 889 aa13.84□□□□□ -0.19
CPNE1-218ENST00000439806 KIF13AQ9H1H9 1805 aa13.84□□□□□ -0.19
CPNE1-218ENST00000439806 NSD3Q9BZ95 1437 aa13.83□□□□□ -0.2
CPNE1-218ENST00000439806 CCDC136Q96JN2 1154 aa13.83□□□□□ -0.2
CPNE1-218ENST00000439806 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.2
CPNE1-218ENST00000439806 EVC2Q86UK5 1308 aa13.83□□□□□ -0.2
CPNE1-218ENST00000439806 ARHGEF40Q8TER5 1519 aa13.81□□□□□ -0.2
CPNE1-218ENST00000439806 TULP4Q9NRJ4 1543 aa13.81□□□□□ -0.2
CPNE1-218ENST00000439806 CARD14Q9BXL6 1004 aa13.81□□□□□ -0.2
CPNE1-218ENST00000439806 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
CPNE1-218ENST00000439806 CDCA7LQ96GN5 454 aa13.8□□□□□ -0.2
CPNE1-218ENST00000439806 PUS7Q96PZ0 661 aaKnown RBP13.8□□□□□ -0.2
CPNE1-218ENST00000439806 STAG3Q9UJ98 1225 aa13.8□□□□□ -0.2
CPNE1-218ENST00000439806 MORC1Q86VD1 984 aa13.78□□□□□ -0.2
CPNE1-218ENST00000439806 SPATA31D1Q6ZQQ2 1576 aa13.78□□□□□ -0.2
CPNE1-218ENST00000439806 POLR3AO14802 1390 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-218ENST00000439806 SHPRHQ149N8 1683 aa13.77□□□□□ -0.21
CPNE1-218ENST00000439806 SLC12A5Q9H2X9 1139 aa13.77□□□□□ -0.21
CPNE1-218ENST00000439806 ALKQ9UM73 1620 aa13.77□□□□□ -0.21
CPNE1-218ENST00000439806 ANKRD36BQ8N2N9 1353 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms